prot_F-distichus_contig10257.222.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10257.222.1
Unique Nameprot_F-distichus_contig10257.222.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length987
Homology
BLAST of mRNA_F-distichus_contig10257.222.1 vs. uniprot
Match: A0A6H5JLA9_9PHAE (HeH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA9_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 1.480e-64
Identity = 303/942 (32.17%), Postives = 386/942 (40.98%), Query Frame = 0
Query:  114 DVAAFVLSTLLLCNPRLAEAASPNTRASLAPSTVSQERLLADLEKKLMISPSGPERGAKVSSSAPEKKEADSGAKTGPRATRDAAVQPTAEEQPPTPPTASDSVPLSASQDVXXXXXSAAPPAVTAKPSAAAKSELSPDLEVNSLGTKEKGPLVKFQEYTFTVKLPELNLKNAPVGPITVPEDGSAFSS--------ALSFERVRPLINLFAEPA-RETLTSAGKRGGFPELARSIGGVVPRQADYDRATTEFEERVRNSIKAVENPLFPSGVPLAPEFTSMFSRAKESAFSAVRPYLAKGVEPELALFMLVTLPVVTVALRAADEQSRRPMEDSRTPASFPP---------------------KAGQNRAKARLFPWVKKGQTVSEATPV----GVANLEEVMAEVSVGGGVVAAVPEENREEKLRAEMKRLQEELVSATKLAAKVGALERANVRLMKEVADLRKPLSPEEIHRLAEKENERARLRKERDERESKALRGVLERTERLTAAREAMVESFPVRGPEIFADEREAQEAEESLEEPSVAPPLPAIRAKAAEDRSVAAVGGGGASPATILSAEALSAPADSMKGKPKSVRSGVKTLGTAPDRVGTSSSASAGKSDFAAPSVHNGLARPEQSGEEFELEEAGEETRIVAGTAGADNPASVAPTMGKDALPGALPDAVDEVPEDLSRALRGARGFDLDALDLEMDDLRPEDLEELHELEREMGDLDMASLEAE-FDKEEDETIANALRMAAESALAHTSGDG--RRIRTASPIGATSSRGASSGGLEGSAGFDGGPGSPASETAGPARGVDTALYDAIVEEAAGELSLPPASEG-EAAALRRLAQE---EARSTDGKWDGR-----------------------------NEWRLLSTAEMKRKTVAQLKEFLDEEGVRYPSRAKKADLVDLVCENVA 985
            +++A +LS +LL NP+++ AA   T  + AP T  Q RL+ADLE++L    SGP   A  ++ A            G              E P    T  DS P   S                  P                  T    P +K +EY FTVKLPEL++    VGPITVPE+G+ F+         A S ERV P  +  A  A R  L SAGK  G  EL  +    VPRQ DY+RA  EFEERV   +K   NP F  GVPLAPEFTSM S+AKE+AF+ +RPYL KG EPELALFMLVTLPV+TVALR+ADE SRRP +D   P S PP                     K  Q +A       +++   V     V    G   +E   A     GGV AAV E  + + + AE+ RL+EEL +                                                                         E +  +FP R  E  A E  +                                                                             T               +HNG +   +             T  V G               +DA+    P+  +++ E+LSRA+ G +G+D+D LDLEM DLRPEDLEEL  LE  MG LDMAS + E F  E+DE+++  LRMAAESALAHTSG G  RRIRTASP+GATS R A+           GG  +  +E+ G A    TA+ D    E  G  S+P ++E  E AA RRL  E   +  +    W G                               +W  LS   + RKTVA LKEFLDEEG+ YPS+ KKA+LVD+V   +A
Sbjct:  108 ELSAALLSAMLLGNPQVSGAA---TATAQAPGTADQNRLIADLERRLTSVSSGPAAAAASTADA-----------LGXXXXXXXXXXXXXTEAPTAAATV-DSNPRVPSMFA---------------PXXXXXXXXXXXXAAKQTSTPAPKPSIKMKEYKFTVKLPELDVPT--VGPITVPEEGNVFAGVEPWAIFKAPSRERVLPHPDFPAAGAIRGALQSAGKGDGVKELTDAFAAAVPRQGDYNRAVMEFEERVSELVKTTHNPTFAPGVPLAPEFTSMLSKAKETAFNGIRPYLPKGAEPELALFMLVTLPVLTVALRSADENSRRPKQDPLPPVSRPPRITRYPNSPAKVDAEAVAEALKERQAQADVEAVAKLREELAVRGLAAVQVQEGAPAVEAAAAVEGSHGGVAAAVAE--KPDAITAELARLREELAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKLSNAFPAR--ESLAAEAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESPEPTM--------------LHNGASVMMEG------------TETVVGXXXXXXX-----XXXEDAV---TPNEYEDMSENLSRAVLGVQGYDMDGLDLEMADLRPEDLEELLALE--MGGLDMASRDEEDFGPEDDESMSQGLRMAAESALAHTSGGGAGRRIRTASPVGATSLRSAA-----------GGAAAAVAESRGGAPQA-TAVRDG---EGVGLSSVPGSTEDDELAAFRRLEAEAVGDFGTAAAGWGGXXXXXXXXXXXXXXXXXXXXXXXXGAPQDDGDWGALSAKAVGRKTVAALKEFLDEEGIDYPSKIKKAELVDMVLNMLA 962          
BLAST of mRNA_F-distichus_contig10257.222.1 vs. uniprot
Match: D7FLN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN9_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 8.300e-44
Identity = 221/664 (33.28%), Postives = 286/664 (43.07%), Query Frame = 0
Query:  386 MFSRAKESAFSAVRPYLAKGVEPELALFMLVTLPVVTVALRAADEQSRRPMEDSRTPASFPP---------------------KAGQNRAKARLFPWVKKGQTVSEATPVGVAN---LEEVMAEVSVGG---GVVAAVPEENREEKLRAEMKRLQEELVSATKLAAKVGALERANVRLMKEVADLRKPLSPEEIHRLAEKENERARLRKERDERESKALRGVLERTERLTAAREAMVESFPVRGPEIFADEREAQEAEESLEEPSVAPPLPAIRAKAAEDRSVAAVGGGGASPATILSAEALSAPADSMKGKPKSVRSGVKTLGTAPDRVGTSSSASAGKSDFAAPSVHNGLARPEQSGEEFELEEAGEETRIVAGTAGADNPASVAPTMGKDALPGAL-PDAVDEVPEDLSRALRGARGFDLDALDLEMDDLRPEDLEELHELEREMGDLDMASLEAE-FDKEEDETIANALRMAAESALAHTSGDG--RRIRTASPIGATSSRGASSGGLEGSAGFDGGPGSPASETAGPARGVDTALYDAIVEEAAGELSLPPASEGEAAALRRLAQEEARSTDGK----WDGRN-----------------------------EWRLLSTAEMKRKTVAQLKEFLDEEGVRYPSRAKKADLVDLVCENVA 985
            M S+AKE+AF+ +RPYL KG E ELALFMLVTLPV+TVALR+ADE SRRP  D   P + PP                     K  Q +A       +++   V     V VA+     E  A   VGG   GV AAV    + + + AE+ RL+EEL +A KL                           EEI   +EKE  RA  ++        A  GV E+  +L+AARE + ++FP R  E  A E  A                                                        G              +P+                   +HNG +   +          G ET +     GA                 A+ P+  +++ EDLSRA+ G +G+D+D LDLEM DLRPEDLEEL  LE  MG LDMA+ + E F  E+DE+++  LRMAAESALAHTSG G  RRIRTASP+GATS R   SGG   +A  +   G+P +       GV  +     +EE           E E AA RRL + EA +  G     W G+                              +W  LS   + RKTVA LKEFLDEEG+ YPS+ KKA+LVD+V   +A
Sbjct:    1 MLSKAKENAFNGIRPYLPKGAETELALFMLVTLPVLTVALRSADENSRRPKPDPLPPVARPPRITRYPNSPAKVDAEAVAEARKERQAQAXXXXXAKLREELAVRGLAAVTVADGAPAVEAAAGAVVGGLHGGVAAAVAA--KPDAITAELARLREELAAAGKLXXXXXXXXXXXXXXXXXXXXXXXXXXXEEIRLRSEKEAMRAAAQRXXXXXREAAYAGVQEKATKLSAAREKLSDAFPAR--ESLAAEA-ASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXAVESPEPT----------------MLHNGASVMME----------GTETAV-----GAXXXXXXXXXXXXXXXXAAVTPNEYEDMSEDLSRAVLGVQGYDMDGLDLEMTDLRPEDLEELLALE--MGGLDMAARDEEDFGPEDDESMSQGLRMAAESALAHTSGGGAGRRIRTASPVGATSLR---SGGSAAAAVAESRGGAPQATAVREGEGVGFSSVPGTIEE-----------EDELAAFRRL-EAEAVADFGTGAAGWGGQQSVGVGRQPAPAXXXXXXXXXXGGAPQDDGDWGALSAKAVGRKTVAALKEFLDEEGMDYPSKIKKAELVDMVLNMLA 611          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10257.222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLA9_9PHAE1.480e-6432.17HeH domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FLN9_ECTSI8.300e-4433.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 495..522
NoneNo IPR availableCOILSCoilCoilcoord: 553..575
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 429..986
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..409
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 410..428
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR025856HeH/LEM domainPFAMPF12949HeHcoord: 952..980
e-value: 6.4E-10
score: 38.6

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 495..522
NoneNo IPR availableCOILSCoilCoilcoord: 553..575
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 429..986
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..409
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 410..428
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR025856HeH/LEM domainPFAMPF12949HeHcoord: 952..980
e-value: 6.4E-10
score: 38.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10257contigF-distichus_contig10257:2034..7550 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10257.222.1mRNA_F-distichus_contig10257.222.1Fucus distichus monoicousmRNAF-distichus_contig10257 1810..7567 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10257.222.1 ID=prot_F-distichus_contig10257.222.1|Name=mRNA_F-distichus_contig10257.222.1|organism=Fucus distichus monoicous|type=polypeptide|length=987bp
MSENRRRKAAAAFAAAVGLCLAFIPPSLAFQLQALHGVRVNSEVSSSSSR
SHPFRGRRSAATCRKLTINAGGQGHKGEEERRHAAGIPISPAASRDSDCG
TSEESSVRSGGGKDVAAFVLSTLLLCNPRLAEAASPNTRASLAPSTVSQE
RLLADLEKKLMISPSGPERGAKVSSSAPEKKEADSGAKTGPRATRDAAVQ
PTAEEQPPTPPTASDSVPLSASQDVPASAASAAPPAVTAKPSAAAKSELS
PDLEVNSLGTKEKGPLVKFQEYTFTVKLPELNLKNAPVGPITVPEDGSAF
SSALSFERVRPLINLFAEPARETLTSAGKRGGFPELARSIGGVVPRQADY
DRATTEFEERVRNSIKAVENPLFPSGVPLAPEFTSMFSRAKESAFSAVRP
YLAKGVEPELALFMLVTLPVVTVALRAADEQSRRPMEDSRTPASFPPKAG
QNRAKARLFPWVKKGQTVSEATPVGVANLEEVMAEVSVGGGVVAAVPEEN
REEKLRAEMKRLQEELVSATKLAAKVGALERANVRLMKEVADLRKPLSPE
EIHRLAEKENERARLRKERDERESKALRGVLERTERLTAAREAMVESFPV
RGPEIFADEREAQEAEESLEEPSVAPPLPAIRAKAAEDRSVAAVGGGGAS
PATILSAEALSAPADSMKGKPKSVRSGVKTLGTAPDRVGTSSSASAGKSD
FAAPSVHNGLARPEQSGEEFELEEAGEETRIVAGTAGADNPASVAPTMGK
DALPGALPDAVDEVPEDLSRALRGARGFDLDALDLEMDDLRPEDLEELHE
LEREMGDLDMASLEAEFDKEEDETIANALRMAAESALAHTSGDGRRIRTA
SPIGATSSRGASSGGLEGSAGFDGGPGSPASETAGPARGVDTALYDAIVE
EAAGELSLPPASEGEAAALRRLAQEEARSTDGKWDGRNEWRLLSTAEMKR
KTVAQLKEFLDEEGVRYPSRAKKADLVDLVCENVAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025856HeH/LEM_domain