prot_F-distichus_contig102495.211.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig102495.211.1
Unique Nameprot_F-distichus_contig102495.211.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length51
Homology
BLAST of mRNA_F-distichus_contig102495.211.1 vs. uniprot
Match: D8LD88_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD88_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 2.180e-14
Identity = 32/42 (76.19%), Postives = 39/42 (92.86%), Query Frame = 0
Query:    2 RDVGRTFPNQRLFRSKSGPGQNMLANVLKAYIRSNPDVGYCQ 43
            RDVGRTFP Q LF+S++GPGQN+LANVLKA +++NPDVGYCQ
Sbjct:  202 RDVGRTFPRQDLFKSRNGPGQNLLANVLKACLKTNPDVGYCQ 243          
BLAST of mRNA_F-distichus_contig102495.211.1 vs. uniprot
Match: A0A6H5KV33_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV33_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 2.180e-14
Identity = 32/42 (76.19%), Postives = 39/42 (92.86%), Query Frame = 0
Query:    2 RDVGRTFPNQRLFRSKSGPGQNMLANVLKAYIRSNPDVGYCQ 43
            RDVGRTFP Q LF+S++GPGQN+LANVLKA +++NPDVGYCQ
Sbjct:  203 RDVGRTFPRQDLFKSRNGPGQNLLANVLKACLKTNPDVGYCQ 244          
BLAST of mRNA_F-distichus_contig102495.211.1 vs. uniprot
Match: A0A507E380_9FUNG (Rab-GAP TBC domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E380_9FUNG)

HSP 1 Score: 58.9 bits (141), Expect = 7.110e-9
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 DRDVGRTFPNQRLFRSKSGPGQNMLANVLKAYIRSNPDVGYCQ 43
            +RD+GR FP  ++F  + GPGQ  L NVL+AY   NP++GYCQ
Sbjct:   84 ERDIGRCFPEHKMFAEEGGPGQTNLRNVLRAYALYNPEIGYCQ 126          
BLAST of mRNA_F-distichus_contig102495.211.1 vs. uniprot
Match: A0A177WSG0_BATDL (Rab-GAP TBC domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177WSG0_BATDL)

HSP 1 Score: 54.7 bits (130), Expect = 2.490e-7
Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    2 RDVGRTFPNQRLFRSKSGPGQNMLANVLKAYIRSNPDVGYCQ 43
            RD+ RTFPN   F+  +GPGQN L NVLKAY   + ++GYCQ
Sbjct:  311 RDLARTFPNHPHFKDATGPGQNSLFNVLKAYSIYDQEIGYCQ 352          
BLAST of mRNA_F-distichus_contig102495.211.1 vs. uniprot
Match: A0A1R1Y513_9FUNG (TBC1 domain family member 10B n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y513_9FUNG)

HSP 1 Score: 52.8 bits (125), Expect = 1.200e-6
Identity = 22/43 (51.16%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 DRDVGRTFPNQRLFRSKSGPGQNMLANVLKAYIRSNPDVGYCQ 43
            +RD+ R+FPN  +F  KS  GQ+ L  +L AY++ NP+VGYCQ
Sbjct:  791 ERDLSRSFPNHAMFYDKSCGGQSCLRRILIAYLKYNPEVGYCQ 833          
BLAST of mRNA_F-distichus_contig102495.211.1 vs. uniprot
Match: A0A1R1XLI4_9FUNG (TBC1 domain family member 10B n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XLI4_9FUNG)

HSP 1 Score: 52.0 bits (123), Expect = 2.240e-6
Identity = 21/43 (48.84%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 DRDVGRTFPNQRLFRSKSGPGQNMLANVLKAYIRSNPDVGYCQ 43
            +RD+ R+FPN  +F  +S  GQ+ L  +L AY++ NP+VGYCQ
Sbjct:  805 ERDLSRSFPNHAMFYDESCGGQSCLRRILTAYLKYNPEVGYCQ 847          
BLAST of mRNA_F-distichus_contig102495.211.1 vs. uniprot
Match: A0A163DV54_PHYB8 (Rab-GAP TBC domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A163DV54_PHYB8)

HSP 1 Score: 51.6 bits (122), Expect = 3.050e-6
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = 0
Query:    1 DRDVGRTFPNQRLFRSKSGPGQNMLANVLKAYIRSNPDVGYCQ 43
            +RD+ R +P+   F   +G GQ  L N+LKAY R NP VGYCQ
Sbjct:  478 ERDIARCYPDHSQFNDANGQGQLDLRNILKAYSRHNPQVGYCQ 520          
BLAST of mRNA_F-distichus_contig102495.211.1 vs. uniprot
Match: A0A2T9YB58_9FUNG (Rab-GAP TBC domain-containing protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YB58_9FUNG)

HSP 1 Score: 51.2 bits (121), Expect = 4.180e-6
Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 0
Query:    1 DRDVGRTFPNQRLFRSKSGPGQNMLANVLKAYIRSNPDVGYCQ-VKRVGGI 50
            +RD+ R+FPN   F  +S  G   L  +L+AY+R NP+VGYCQ + +V G+
Sbjct:  479 ERDLPRSFPNHAYFYDESCQGIQKLRRILRAYVRYNPEVGYCQGMNQVAGV 529          
BLAST of mRNA_F-distichus_contig102495.211.1 vs. uniprot
Match: A0A1Y1VKD9_9FUNG (RabGAP/TBC n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VKD9_9FUNG)

HSP 1 Score: 50.8 bits (120), Expect = 5.710e-6
Identity = 22/42 (52.38%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    2 RDVGRTFPNQRLFRSKSGPGQNMLANVLKAYIRSNPDVGYCQ 43
            +D+ R +P+  +F  K+  GQN L NVLKAY R NP +GYCQ
Sbjct:  233 KDITRCYPDHIMFNDKNYYGQNNLYNVLKAYSRYNPSIGYCQ 274          
BLAST of mRNA_F-distichus_contig102495.211.1 vs. uniprot
Match: A0A1R0GUH9_9FUNG (TBC1 domain family member 10B n=2 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GUH9_9FUNG)

HSP 1 Score: 50.4 bits (119), Expect = 7.840e-6
Identity = 22/43 (51.16%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 DRDVGRTFPNQRLFRSKSGPGQNMLANVLKAYIRSNPDVGYCQ 43
            +RD+ R+FP+  LF  +S  GQ+ L  VL AY++ NP+VGYCQ
Sbjct:  752 ERDLSRSFPSHALFYDESCGGQDCLRRVLIAYLKYNPEVGYCQ 794          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102495.211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LD88_ECTSI2.180e-1476.19Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KV33_9PHAE2.180e-1476.19Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A507E380_9FUNG7.110e-953.49Rab-GAP TBC domain-containing protein n=1 Tax=Powe... [more]
A0A177WSG0_BATDL2.490e-757.14Rab-GAP TBC domain-containing protein n=2 Tax=Batr... [more]
A0A1R1Y513_9FUNG1.200e-651.16TBC1 domain family member 10B n=1 Tax=Smittium cul... [more]
A0A1R1XLI4_9FUNG2.240e-648.84TBC1 domain family member 10B n=1 Tax=Smittium cul... [more]
A0A163DV54_PHYB83.050e-651.16Rab-GAP TBC domain-containing protein n=1 Tax=Phyc... [more]
A0A2T9YB58_9FUNG4.180e-645.10Rab-GAP TBC domain-containing protein n=1 Tax=Smit... [more]
A0A1Y1VKD9_9FUNG5.710e-652.38RabGAP/TBC n=1 Tax=Piromyces finnis TaxID=1754191 ... [more]
A0A1R0GUH9_9FUNG7.840e-651.16TBC1 domain family member 10B n=2 Tax=Smittium muc... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 2..43
e-value: 3.2E-12
score: 46.5
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..50
score: 10.892
NoneNo IPR availableGENE3D1.10.8.270coord: 1..47
e-value: 1.5E-14
score: 55.7
NoneNo IPR availablePANTHERPTHR22957:SF444coord: 2..43
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 2..43
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 1..43

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 2..43
e-value: 3.2E-12
score: 46.5
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..50
score: 10.892
NoneNo IPR availableGENE3D1.10.8.270coord: 1..47
e-value: 1.5E-14
score: 55.7
NoneNo IPR availablePANTHERPTHR22957:SF444coord: 2..43
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 2..43
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 1..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig102495contigF-distichus_contig102495:738..890 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig102495.211.1mRNA_F-distichus_contig102495.211.1Fucus distichus monoicousmRNAF-distichus_contig102495 738..890 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig102495.211.1 ID=prot_F-distichus_contig102495.211.1|Name=mRNA_F-distichus_contig102495.211.1|organism=Fucus distichus monoicous|type=polypeptide|length=51bp
DRDVGRTFPNQRLFRSKSGPGQNMLANVLKAYIRSNPDVGYCQVKRVGGI
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf