prot_F-distichus_contig102494.210.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig102494.210.1
Unique Nameprot_F-distichus_contig102494.210.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length150
Homology
BLAST of mRNA_F-distichus_contig102494.210.1 vs. uniprot
Match: A0A6H5KHP8_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP8_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 6.390e-56
Identity = 110/174 (63.22%), Postives = 118/174 (67.82%), Query Frame = 0
Query:    2 PRFGRFTGLLDVPGTLLEWSGDRDGDNKSDRPRRSETGAAGEAIF-------------------------GATRQELEVMFRTALNEDQRAAVRKVVTAKDYALLLGMPGTGKTWTIAFAVRVLLARGASVLITSYTHSAVDNLLLKLVAEGVPCLRVGKPSSVHPGVRSCCIN 150
            PRFGRFTGLLDVPGTLL W+G   G   ++                                         ++  ELE MFRTALNEDQR AVRK+VTAKDYALLLGMPGTGKTWTIAFAVRVLLARGASVLITSYTHSAVDNLLLKL+ EGVPCLRVGKPSSVH GVR  C+N
Sbjct: 1432 PRFGRFTGLLDVPGTLLGWAGGCYGGGNAESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSTGELEAMFRTALNEDQRDAVRKLVTAKDYALLLGMPGTGKTWTIAFAVRVLLARGASVLITSYTHSAVDNLLLKLIEEGVPCLRVGKPSSVHAGVRPHCVN 1605          
BLAST of mRNA_F-distichus_contig102494.210.1 vs. uniprot
Match: D7FGT6_ECTSI (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT6_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 2.810e-49
Identity = 87/95 (91.58%), Postives = 91/95 (95.79%), Query Frame = 0
Query:   56 MFRTALNEDQRAAVRKVVTAKDYALLLGMPGTGKTWTIAFAVRVLLARGASVLITSYTHSAVDNLLLKLVAEGVPCLRVGKPSSVHPGVRSCCIN 150
            MFRTALNEDQR AVRK+VTAKDYALLLGMPGTGKTWTIAFAVRVLLARGASVL+TSYTHSAVDNLLLKL+ EGVPCLRVGKPSSVHPGVR  C+N
Sbjct:    1 MFRTALNEDQRDAVRKLVTAKDYALLLGMPGTGKTWTIAFAVRVLLARGASVLVTSYTHSAVDNLLLKLIEEGVPCLRVGKPSSVHPGVRPHCVN 95          
BLAST of mRNA_F-distichus_contig102494.210.1 vs. uniprot
Match: A0A7S4DBL3_HETAK (DNA replication ATP-dependent helicase/nuclease (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBL3_HETAK)

HSP 1 Score: 130 bits (327), Expect = 3.790e-35
Identity = 71/101 (70.30%), Postives = 81/101 (80.20%), Query Frame = 0
Query:   47 GATRQELEVMFRTALNEDQRAAVRKVVTAKDYALLLGMPGTGKTWTIAFAVRVLLARGASVLITSYTHSAVDNLLLKLVAEGVPCLRVG-KPSSVHPGVRS 146
            G  RQEL   F+T LNEDQ+ AVR VVTA+DYAL+LGMPG GKT  IA+ VR+L+ARGA VL+TSYTHSAVDNLLLKLVA GVP  RVG +   VHPGVR+
Sbjct:  106 GCGRQELMKEFQT-LNEDQQEAVRAVVTAEDYALILGMPGAGKTSVIAYIVRLLVARGARVLVTSYTHSAVDNLLLKLVARGVPVARVGGREDQVHPGVRA 205          
BLAST of mRNA_F-distichus_contig102494.210.1 vs. uniprot
Match: A0A1U7X2E4_NICSY (DNA replication ATP-dependent helicase/nuclease DNA2-like n=1 Tax=Nicotiana sylvestris TaxID=4096 RepID=A0A1U7X2E4_NICSY)

HSP 1 Score: 117 bits (292), Expect = 4.680e-29
Identity = 55/90 (61.11%), Postives = 74/90 (82.22%), Query Frame = 0
Query:   61 LNEDQRAAVRKVVTAKDYALLLGMPGTGKTWTIAFAVRVLLARGASVLITSYTHSAVDNLLLKLVAEGVPCLRVGKPSSVHPGVRSCCIN 150
            LN+DQR A+ K++TAKDYAL+LGMPGTGKT T+ +AV+ LL RG+S+L+TSYT+SAVDNLLLKL A+G+  +R+G+   VH  VR  C++
Sbjct:  129 LNDDQRRAILKILTAKDYALILGMPGTGKTSTMVYAVKALLMRGSSILLTSYTNSAVDNLLLKLKAQGIDFIRIGRYEVVHEEVRENCLS 218          
BLAST of mRNA_F-distichus_contig102494.210.1 vs. uniprot
Match: A0A8I2ZGM8_9PEZI (DNA replication ATP-dependent helicase/nuclease DNA2 like protein n=1 Tax=Verticillium longisporum TaxID=100787 RepID=A0A8I2ZGM8_9PEZI)

HSP 1 Score: 120 bits (302), Expect = 6.720e-29
Identity = 58/100 (58.00%), Postives = 78/100 (78.00%), Query Frame = 0
Query:   46 FGATRQELEVMFRTALNEDQRAAVRKVVTAKDYALLLGMPGTGKTWTIAFAVRVLLARGASVLITSYTHSAVDNLLLKLVAEGVPCLRVGKPSSVHPGVR 145
            F A   + E+  R +LN DQ+AA+ KV+TA+DYAL+LGMPGTGKT TIA  +R L+++G SVL+TSYTH+AVDN+LLKL  + +P LR+G P+ VHP V+
Sbjct:  282 FKAAPTQYEIADRASLNVDQQAAIEKVMTAQDYALVLGMPGTGKTTTIAHIIRALVSQGKSVLLTSYTHTAVDNILLKLKDDSIPVLRLGAPAKVHPEVQ 381          
BLAST of mRNA_F-distichus_contig102494.210.1 vs. uniprot
Match: A0A0G4LH73_9PEZI (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Verticillium longisporum TaxID=100787 RepID=A0A0G4LH73_9PEZI)

HSP 1 Score: 120 bits (302), Expect = 6.920e-29
Identity = 58/100 (58.00%), Postives = 78/100 (78.00%), Query Frame = 0
Query:   46 FGATRQELEVMFRTALNEDQRAAVRKVVTAKDYALLLGMPGTGKTWTIAFAVRVLLARGASVLITSYTHSAVDNLLLKLVAEGVPCLRVGKPSSVHPGVR 145
            F A   + E+  R +LN DQ+AA+ KV+TA+DYAL+LGMPGTGKT TIA  +R L+++G SVL+TSYTH+AVDN+LLKL  + +P LR+G P+ VHP V+
Sbjct:  498 FKAAPTQYEIADRASLNVDQQAAIEKVMTAQDYALVLGMPGTGKTTTIAHIIRALVSQGKSVLLTSYTHTAVDNILLKLKDDSIPVLRLGAPAKVHPEVQ 597          
BLAST of mRNA_F-distichus_contig102494.210.1 vs. uniprot
Match: A0A3M9Y0J8_9PEZI (DNA replication ATP-dependent helicase/nuclease n=10 Tax=Verticillium TaxID=1036719 RepID=A0A3M9Y0J8_9PEZI)

HSP 1 Score: 120 bits (302), Expect = 7.160e-29
Identity = 58/100 (58.00%), Postives = 78/100 (78.00%), Query Frame = 0
Query:   46 FGATRQELEVMFRTALNEDQRAAVRKVVTAKDYALLLGMPGTGKTWTIAFAVRVLLARGASVLITSYTHSAVDNLLLKLVAEGVPCLRVGKPSSVHPGVR 145
            F A   + E+  R +LN DQ+AA+ KV+TA+DYAL+LGMPGTGKT TIA  +R L+++G SVL+TSYTH+AVDN+LLKL  + +P LR+G P+ VHP V+
Sbjct: 1093 FKAAPTQYEIADRASLNVDQQAAIEKVMTAQDYALVLGMPGTGKTTTIAHIIRALVSQGKSVLLTSYTHTAVDNILLKLKHDSIPVLRLGAPAKVHPEVQ 1192          
BLAST of mRNA_F-distichus_contig102494.210.1 vs. uniprot
Match: A0A199VK37_ANACO (DNA replication ATP-dependent helicase/nuclease (Fragment) n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199VK37_ANACO)

HSP 1 Score: 119 bits (298), Expect = 1.870e-28
Identity = 55/96 (57.29%), Postives = 78/96 (81.25%), Query Frame = 0
Query:   55 VMFRTALNEDQRAAVRKVVTAKDYALLLGMPGTGKTWTIAFAVRVLLARGASVLITSYTHSAVDNLLLKLVAEGVPCLRVGKPSSVHPGVRSCCIN 150
            V    +LN+DQR +++K++TAKDYAL+LGMPGTGKT+T+  AV+ LL RGAS+LITSYT+SA+DNLL+KL ++G+  +R+G+  +VH  VRS C +
Sbjct:  204 VRSEKSLNDDQRRSIQKILTAKDYALILGMPGTGKTFTMVHAVKALLIRGASILITSYTNSAIDNLLIKLKSQGIDFVRIGRHGAVHQDVRSHCFS 299          
BLAST of mRNA_F-distichus_contig102494.210.1 vs. uniprot
Match: A0A103XUJ5_CYNCS (Dna2 n=2 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103XUJ5_CYNCS)

HSP 1 Score: 119 bits (298), Expect = 2.450e-28
Identity = 55/90 (61.11%), Postives = 73/90 (81.11%), Query Frame = 0
Query:   61 LNEDQRAAVRKVVTAKDYALLLGMPGTGKTWTIAFAVRVLLARGASVLITSYTHSAVDNLLLKLVAEGVPCLRVGKPSSVHPGVRSCCIN 150
            LN+DQR A+ K++TAKDY L+LGMPGTGKT T+  AV+ LL RGAS+L+TSYT+SAVDNLL+KL  +G+  +R+G+  +VH G+R  CIN
Sbjct: 1018 LNDDQRKAILKILTAKDYTLILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKFQGIDFIRIGREEAVHEGIRGNCIN 1107          
BLAST of mRNA_F-distichus_contig102494.210.1 vs. uniprot
Match: A0A4D9APU9_SALSN (DNA replication ATP-dependent helicase Dna2 n=3 Tax=Salvia TaxID=21880 RepID=A0A4D9APU9_SALSN)

HSP 1 Score: 118 bits (296), Expect = 4.570e-28
Identity = 57/96 (59.38%), Postives = 76/96 (79.17%), Query Frame = 0
Query:   55 VMFRTALNEDQRAAVRKVVTAKDYALLLGMPGTGKTWTIAFAVRVLLARGASVLITSYTHSAVDNLLLKLVAEGVPCLRVGKPSSVHPGVRSCCIN 150
            V    +LN+DQR A+ K++TAKDYAL+LGMPGTGKT T+  AV+ LL RGAS+L+TSYT+SAVDNLL+KL A+GV  +R+G+  +VH  VR  C++
Sbjct: 1024 VQSEKSLNDDQRRAILKILTAKDYALILGMPGTGKTSTMVHAVKALLLRGASILLTSYTNSAVDNLLIKLKAQGVDFIRIGRNEAVHEEVRENCLS 1119          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102494.210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHP8_9PHAE6.390e-5663.22DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FGT6_ECTSI2.810e-4991.58DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A7S4DBL3_HETAK3.790e-3570.30DNA replication ATP-dependent helicase/nuclease (F... [more]
A0A1U7X2E4_NICSY4.680e-2961.11DNA replication ATP-dependent helicase/nuclease DN... [more]
A0A8I2ZGM8_9PEZI6.720e-2958.00DNA replication ATP-dependent helicase/nuclease DN... [more]
A0A0G4LH73_9PEZI6.920e-2958.00DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A3M9Y0J8_9PEZI7.160e-2958.00DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A199VK37_ANACO1.870e-2857.29DNA replication ATP-dependent helicase/nuclease (F... [more]
A0A103XUJ5_CYNCS2.450e-2861.11Dna2 n=2 Tax=Cynara cardunculus var. scolymus TaxI... [more]
A0A4D9APU9_SALSN4.570e-2859.38DNA replication ATP-dependent helicase Dna2 n=3 Ta... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 28..150
e-value: 9.8E-28
score: 99.2
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 60..144
NoneNo IPR availablePANTHERPTHR10887:SF448coord: 60..144
IPR041677DNA2/NAM7 helicase, AAA domainPFAMPF13086AAA_11coord: 61..148
e-value: 3.6E-13
score: 49.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 61..137

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 28..150
e-value: 9.8E-28
score: 99.2
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 60..144
NoneNo IPR availablePANTHERPTHR10887:SF448coord: 60..144
IPR041677DNA2/NAM7 helicase, AAA domainPFAMPF13086AAA_11coord: 61..148
e-value: 3.6E-13
score: 49.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 61..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig102494contigF-distichus_contig102494:639..1737 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig102494.210.1mRNA_F-distichus_contig102494.210.1Fucus distichus monoicousmRNAF-distichus_contig102494 639..1737 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig102494.210.1 ID=prot_F-distichus_contig102494.210.1|Name=mRNA_F-distichus_contig102494.210.1|organism=Fucus distichus monoicous|type=polypeptide|length=150bp
APRFGRFTGLLDVPGTLLEWSGDRDGDNKSDRPRRSETGAAGEAIFGATR
QELEVMFRTALNEDQRAAVRKVVTAKDYALLLGMPGTGKTWTIAFAVRVL
LARGASVLITSYTHSAVDNLLLKLVAEGVPCLRVGKPSSVHPGVRSCCIN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041677DNA2/NAM7_AAA_11
IPR027417P-loop_NTPase