prot_F-distichus_contig102490.209.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig102490.209.1
Unique Nameprot_F-distichus_contig102490.209.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length62
Homology
[Close]
BLAST of mRNA_F-distichus_contig102490.209.1 vs. uniprot
Match: D7G1Z2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z2_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 1.740e-8
Identity = 32/61 (52.46%), Postives = 44/61 (72.13%), Query Frame = 0 
Query:    1 MVQYCERKLDTVASKTMLNASAKLLRQVRPETGKRFEEEMREERERMRKLKAAHAGANAKA 61
            +V Y E+K+  + + T+L+A  KLLR+   E  KR EEE+  ERER+++LKAAHAG NAKA
Sbjct:   40 LVSYVEKKVPGLTNPTVLDAYTKLLRKATAEREKRHEEEVHGERERLKQLKAAHAGVNAKA 100
[Close]
BLAST of mRNA_F-distichus_contig102490.209.1 vs. uniprot
Match: A0A6H5LC81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC81_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 2.120e-7
Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 0 
Query:    1 MVQYCERKLDTVASKTMLNASAKLLRQVRPETGKRFEEEMREERERMRKLKAAHAGANAKA 61
            ++ + E K+  + + T+L+A  KLLR+   E  KR EEE+  ERER+++LKAAHAG NAKA
Sbjct:   40 LISFVENKVPGLTNPTVLDAYTKLLRKATVEREKRHEEEVHGERERLKQLKAAHAGVNAKA 100
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102490.209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1Z2_ECTSI1.740e-852.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LC81_9PHAE2.120e-749.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..60

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig102490contigF-distichus_contig102490:306..775 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig102490.209.1mRNA_F-distichus_contig102490.209.1Fucus distichus monoicousmRNAF-distichus_contig102490 208..811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig102490.209.1 ID=prot_F-distichus_contig102490.209.1|Name=mRNA_F-distichus_contig102490.209.1|organism=Fucus distichus monoicous|type=polypeptide|length=62bp
MVQYCERKLDTVASKTMLNASAKLLRQVRPETGKRFEEEMREERERMRKL
KAAHAGANAKA*
back to top