prot_F-distichus_contig102292.197.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig102292.197.1
Unique Nameprot_F-distichus_contig102292.197.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length110
Homology
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BLAST of mRNA_F-distichus_contig102292.197.1 vs. uniprot
Match: A0A6H5L9M6_9PHAE (S1 motif domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9M6_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 4.370e-52
Identity = 81/108 (75.00%), Postives = 94/108 (87.04%), Query Frame = 0 
Query:    1 EDPEKDLWKHCEMLPVKDDVASIFARSVRGEKEFPDFAINQRAAVAVGRYLQDPLVEMAGMWTTMDTSDNFGHETFSLKLHPLQDLVPPQQLLRVWTHRLMDSVSDVG 108
            ED E+++WK C + PVKDDVA +FARS RGEKEF DF++NQRAAV + RYLQDPLVE AGMWTTMD+S NFGHE FSL+LHPLQD VPPQQLL+VWTHR+MD+VS VG
Sbjct:  133 EDEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSVNQRAAVGLARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHPLQDQVPPQQLLKVWTHRMMDAVSAVG 240
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BLAST of mRNA_F-distichus_contig102292.197.1 vs. uniprot
Match: D8LQN4_ECTSI (GTB1 RNA binding / hydrolase, acting on ester bonds, also similar to transcription elogantion facto n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN4_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 1.710e-49
Identity = 80/108 (74.07%), Postives = 94/108 (87.04%), Query Frame = 0 
Query:    1 EDPEKDLWKHCEMLPVKDDVASIFARSVRGEKEFPDFAINQRAAVAVGRYLQDPLVEMAGMWTTMDTSDNFGHETFSLKLHPLQDLVPPQQLLRVWTHRLMDSVSDVG 108
            +D E+++WK C + PVKDDVA +FARS RGEKEF DF++NQRAAVA+ RYLQDPLVE AGMWTTMD+S NFGHE FSL+LH LQD VPPQQLL+VWTHR+MD+VS VG
Sbjct: 1090 QDEEEEVWKQCSLAPVKDDVACVFARSTRGEKEFADFSVNQRAAVALARYLQDPLVEFAGMWTTMDSSGNFGHEMFSLRLHALQDQVPPQQLLKVWTHRMMDAVSAVG 1197
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BLAST of mRNA_F-distichus_contig102292.197.1 vs. uniprot
Match: B7G582_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G582_PHATC)

HSP 1 Score: 99.0 bits (245), Expect = 7.630e-22
Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = 0 
Query:    1 EDPEKDLWKHCEMLPVKDDVASIFARSVRGEKEFPDFAINQRAAVAVGRYLQDPLVEMAGMWTTMDTSDNFGHETFSLKLHPLQDLVPPQQLLRVWTHRLMDSVSDVG 108
            +D ++  WK C +  + D VA +F RSVRG KEFPDFA+N + A+AV RY QDPL E+   W+    +  FG E   L +HP+Q L+P  +LLR +   L D  ++VG
Sbjct: 1155 DDQDEGDWK-CNVDLIDDSVAQLFGRSVRGRKEFPDFAVNLKCAIAVARYAQDPLGELTYAWSVASDAGAFGTEMLYLNIHPMQQLLPRTRLLREYERILCDVTAEVG 1261
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BLAST of mRNA_F-distichus_contig102292.197.1 vs. uniprot
Match: A0A7S2A5F9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A5F9_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 6.130e-21
Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 0 
Query:    1 EDPEKDLWKHCEMLPVKDDVASIFARSVRGEKEFPDFAINQRAAVAVGRYLQDPLVEMAGMWTTMDTSDNFGHETFSLKLHPLQDLVPPQQLLRVWTHRLMDSVSDVG 108
            ED E   WK C +  V+D+VA +F RS+RG+KEFPDFA+N + A+AV R+ +DPL E+   W+    +  FG E   L +HPLQ  +P   LLR +   L ++V++VG
Sbjct:   50 EDDEDFQWK-CNVDIVEDNVAQLFGRSIRGKKEFPDFAVNLKCAIAVARHAKDPLGELTYAWSVASDAGVFGAEMLYLNVHPLQRFLPKPLLLRQYERVLCNAVAEVG 156
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BLAST of mRNA_F-distichus_contig102292.197.1 vs. uniprot
Match: A0A7S4R4E1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4E1_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 6.730e-21
Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 0 
Query:    1 EDPEKDLWKHCEMLPVKDDVASIFARSVRGEKEFPDFAINQRAAVAVGRYLQDPLVEMAGMWTTMDTSDNFGHETFSLKLHPLQDLVPPQQLLRVWTHRLMDSVSDVG 108
            ED E   WK C +  V+D+VA +F RS+RG+KEFPDFA+N + A+AV R+ +DPL E+   W+    +  FG E   L +HPLQ  +P   LLR +   L ++V++VG
Sbjct: 1250 EDDEDFQWK-CNVDIVEDNVAQLFGRSIRGKKEFPDFAVNLKCAIAVARHAKDPLGELTYAWSVASDAGVFGAEMLYLNVHPLQRFLPKPLLLRQYERVLCNAVAEVG 1356
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BLAST of mRNA_F-distichus_contig102292.197.1 vs. uniprot
Match: A0A7S2K6D1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K6D1_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 4.870e-16
Identity = 40/107 (37.38%), Postives = 67/107 (62.62%), Query Frame = 0 
Query:    4 EKDLWKHCEMLPVKDDVASIFARSVRGEKEFPDFA--INQRAAVAVGRYLQDPLVEMAGMWTTMDTSDNFGHETFSLKLHPLQDLVPPQQLLRVWTHRLMDSVSDVG 108
            E + W+ C++  V D +A +FARSVR +KEFPDF   +  + A+ + RY Q+P+ E+A  ++T   + +FG E   L +H LQ  +P  QLL+ +   + ++V++VG
Sbjct: 1103 EDEEWR-CKVDMVDDSIAQLFARSVRSQKEFPDFKSMMGLKCAIGIARYCQNPVAEIAYAYSTASDNGSFGGELLFLNIHELQQFLPKVQLLQHYERAICEAVAEVG 1208
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BLAST of mRNA_F-distichus_contig102292.197.1 vs. uniprot
Match: A0A418B159_9STRA (JmjC domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B159_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.500e-12
Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 0 
Query:   16 VKDDVASIFARSVRGEKEFPDFAINQRAAVAVGRYLQDPLVEMAGMWTTMDTSD-NFGHETFSLKLHPLQDLVPPQQLLRVWTHRLMDSVSDVG 108
            VKDDVA +FA+S R E EFP+     RAA+ + RYL++PL E+  +W  +   +   G E   L +HPLQ +V  + L+R +    +  V+ VG
Sbjct:  873 VKDDVARMFAKSKRAEVEFPEEMEGTRAAIGLARYLRNPLSELCAIWGFVPLEEPGRGKELLYLTVHPLQQMVNQEMLVRAYERVFIQVVNKVG 966
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BLAST of mRNA_F-distichus_contig102292.197.1 vs. uniprot
Match: A0A6H5G3D7_9HEMI (Transcription elongation factor spt6 n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5G3D7_9HEMI)

HSP 1 Score: 68.2 bits (165), Expect = 4.820e-11
Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = 0 
Query:   13 MLPVK---DDVASIFARSVRGEKEFPDFAINQRAAVAVGRYLQDPLVEMAGMWTTMDTSDNFGHETFSLKLHPLQDLVPPQQLLRVWTHRLMDSVSDVG 108
            ++PV+   +D+A ++A S++GE +F D+ +  R A+++GR LQDPL+E + + T  D       E   L+ HPLQD V  ++LL V T   ++  ++VG
Sbjct:  940 VIPVEILDNDLAKVYANSLKGESDFRDYPMLLRQAISLGRRLQDPLIEFSQLCTADD-------EILCLRFHPLQDHVSKEELLDVITLEFVNRTNEVG 1031
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BLAST of mRNA_F-distichus_contig102292.197.1 vs. uniprot
Match: A0A1I8J9S0_9PLAT (Transcription elongation factor spt6 n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8J9S0_9PLAT)

HSP 1 Score: 67.8 bits (164), Expect = 6.520e-11
Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 0 
Query:   16 VKDDVASIFARSVRGEKEFPDFAINQRAAVAVGRYLQDPLVEMAGMWTTMDTSDNFGHETFSLKLHPLQDLVPPQQLLRVWTHRLMDSVSDVG 108
            V ++ A +F +S R EKE P +    R +V+V R LQDPLVE+AG+        N   +   L++HP+QD VP  QLL   T   ++ V++VG
Sbjct:  647 VDNEPARVFEKSRRAEKELPTYPEILRQSVSVARRLQDPLVELAGLV-------NADEDILCLRMHPMQDAVPRDQLLSALTLEFVNKVNEVG 732
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BLAST of mRNA_F-distichus_contig102292.197.1 vs. uniprot
Match: A0A1I8JEX7_9PLAT (Transcription elongation factor spt6 n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8JEX7_9PLAT)

HSP 1 Score: 67.8 bits (164), Expect = 6.530e-11
Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 0 
Query:   16 VKDDVASIFARSVRGEKEFPDFAINQRAAVAVGRYLQDPLVEMAGMWTTMDTSDNFGHETFSLKLHPLQDLVPPQQLLRVWTHRLMDSVSDVG 108
            V ++ A +F +S R EKE P +    R +V+V R LQDPLVE+AG+        N   +   L++HP+QD VP  QLL   T   ++ V++VG
Sbjct:  721 VDNEPARVFEKSRRAEKELPTYPEILRQSVSVARRLQDPLVELAGLV-------NADEDILCLRMHPMQDAVPRDQLLSALTLEFVNKVNEVG 806
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102292.197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L9M6_9PHAE4.370e-5275.00S1 motif domain-containing protein n=1 Tax=Ectocar... [more]
D8LQN4_ECTSI1.710e-4974.07GTB1 RNA binding / hydrolase, acting on ester bond... [more]
B7G582_PHATC7.630e-2244.44Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2A5F9_9STRA6.130e-2144.44Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4R4E1_9STRA6.730e-2144.44Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S2K6D1_9STRA4.870e-1637.38Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A418B159_9STRA5.500e-1239.36JmjC domain-containing protein n=2 Tax=Aphanomyces... [more]
A0A6H5G3D7_9HEMI4.820e-1136.36Transcription elongation factor spt6 n=1 Tax=Nesid... [more]
A0A1I8J9S0_9PLAT6.520e-1139.78Transcription elongation factor spt6 n=1 Tax=Macro... [more]
A0A1I8JEX7_9PLAT6.530e-1139.78Transcription elongation factor spt6 n=3 Tax=Macro... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037027YqgF/RNase H-like domain superfamilyGENE3D3.30.420.140coord: 1..69
e-value: 2.6E-9
score: 38.7
IPR017072Transcription elongation factor Spt6PANTHERPTHR10145TRANSCRIPTION ELONGATION FACTOR SPT6coord: 9..108
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 9..62

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037027YqgF/RNase H-like domain superfamilyGENE3D3.30.420.140coord: 1..69
e-value: 2.6E-9
score: 38.7
IPR017072Transcription elongation factor Spt6PANTHERPTHR10145TRANSCRIPTION ELONGATION FACTOR SPT6coord: 9..108
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 9..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig102292contigF-distichus_contig102292:1044..1665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig102292.197.1mRNA_F-distichus_contig102292.197.1Fucus distichus monoicousmRNAF-distichus_contig102292 1044..1665 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig102292.197.1 ID=prot_F-distichus_contig102292.197.1|Name=mRNA_F-distichus_contig102292.197.1|organism=Fucus distichus monoicous|type=polypeptide|length=110bp
EDPEKDLWKHCEMLPVKDDVASIFARSVRGEKEFPDFAINQRAAVAVGRY
LQDPLVEMAGMWTTMDTSDNFGHETFSLKLHPLQDLVPPQQLLRVWTHRL
MDSVSDVGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037027YqgF/RNaseH-like_dom_sf
IPR017072TF_Spt6
IPR012337RNaseH-like_sf