prot_F-distichus_contig101448.114.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig101448.114.1
Unique Nameprot_F-distichus_contig101448.114.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length224
Homology
BLAST of mRNA_F-distichus_contig101448.114.1 vs. uniprot
Match: D8LDB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB8_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 3.330e-51
Identity = 116/250 (46.40%), Postives = 141/250 (56.40%), Query Frame = 0
Query:    2 GRKNNVQDGALGVDRARLVLTAAAHLHASFWPNPRRLPXXXXXXXXXXXEG--RENHTGEHHQTSPN---ARNHLEGSRWYPQGLHEKGTFWSLEKRDPGDLSGLEEEYQKLLGRFRQLLPEAWFEGELSGGSG------GKGGC-GRGEASLGRRIAARARELDAAVHGSEDVSVSGSGGSSSDEVGERRSGRTLVHGDLKTWNVFFKKS---------------NGHGEEDAGATPGLGGRVKLIDWQ 224
            G+   ++ GAL + RA+ VL+AAAHLHASFWP P               +   R+   G   Q  P+     +H +G   Y +GLH++GTFWSLEKRD GDL+GLEEEYQKLLG FR LLP AWFE    GG          G C G  E  LGRR+AARA  LDAAVH + D  ++ SGG      G+R  GR+LVHGDLKTWNVFFK                 +G G +  G     GG+VK+IDWQ
Sbjct:   83 GQWPQLKVGALDLGRAKAVLSAAAHLHASFWPEPPAAAAGWEPRRHSQPQSPKRQEDHGREQQRHPDLGPGHHHCDGGGRYARGLHKQGTFWSLEKRDAGDLAGLEEEYQKLLGNFRPLLPAAWFESPHQGGDAVGDAARHPGVCAGADERHLGRRLAARALSLDAAVHANGDGVLASSGG------GKR--GRSLVHGDLKTWNVFFKTGGWAEAGEQGEGAAARDGGGVDAQGPAAAAGGKVKIIDWQ 324          
BLAST of mRNA_F-distichus_contig101448.114.1 vs. uniprot
Match: A0A6H5JKQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ9_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 4.060e-45
Identity = 114/244 (46.72%), Postives = 135/244 (55.33%), Query Frame = 0
Query:    8 QDGALGVDRARLVLTAAAHLHASFWPNPRRLPXXXXXXXXXXXEG--RENHTGEHHQTSPN---ARNHLEGSRWYPQGLHEKGTFWSLEKRDPGDLSGLEEEYQKLLGRFRQLLPEAWFEGELSGGSG-GKGG-----CGRG-EASLGRRIAARARELDAAVHGSEDVSVSGSGGSSSDEVGERRSGRTLVHGDLKTWNVFFKKSN-----GHGEEDAGATPGLGG----------RVKLIDWQ 224
            Q GAL   RA+ VL+AAAHLHASFWP P               +   R+   G   Q  P+     +H +G   Y +GLH++GTFWSLEKRD GDL+GLEEEY+KL+  FR LLP AWFE    GG   G        C  G E  LGRR+AARA  LDAAVH + D  ++ SGG      G+R  GR+LVHGDLKTWNVFFK +      G GE  A    G G            VK+IDWQ
Sbjct:  220 QVGALDPGRAKAVLSAAAHLHASFWPEPPPAAGGWEPRGHCQPQSPQRQEDHGREQQRHPDLGSGHHHCDGEWRYARGLHKQGTFWSLEKRDAGDLAGLEEEYRKLMRNFRPLLPAAWFEAPQQGGDAVGDAARRPELCAEGDERHLGRRLAARALSLDAAVHANGDGVLASSGG------GKR--GRSLVHGDLKTWNVFFKTAGWAEPGGQGEGAAARGDGGGDAKGPAAAARRNVKIIDWQ 455          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101448.114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDB8_ECTSI3.330e-5146.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKQ9_9PHAE4.060e-4546.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101448contigF-distichus_contig101448:1075..1998 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101448.114.1mRNA_F-distichus_contig101448.114.1Fucus distichus monoicousmRNAF-distichus_contig101448 1075..1998 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig101448.114.1 ID=prot_F-distichus_contig101448.114.1|Name=mRNA_F-distichus_contig101448.114.1|organism=Fucus distichus monoicous|type=polypeptide|length=224bp
MGRKNNVQDGALGVDRARLVLTAAAHLHASFWPNPRRLPPPPSSPSKKKE
EGRENHTGEHHQTSPNARNHLEGSRWYPQGLHEKGTFWSLEKRDPGDLSG
LEEEYQKLLGRFRQLLPEAWFEGELSGGSGGKGGCGRGEASLGRRIAARA
RELDAAVHGSEDVSVSGSGGSSSDEVGERRSGRTLVHGDLKTWNVFFKKS
NGHGEEDAGATPGLGGRVKLIDWQ
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