prot_F-distichus_contig101114.85.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig101114.85.1
Unique Nameprot_F-distichus_contig101114.85.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length227
Homology
BLAST of mRNA_F-distichus_contig101114.85.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL)

HSP 1 Score: 139 bits (350), Expect = 5.980e-35
Identity = 85/248 (34.27%), Postives = 127/248 (51.21%), Query Frame = 0
Query:   15 QLDVERAFLEVDVTEELHVELPDGYRDSPNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFERFQADPCVF------------------------RRKQDEHQALEDLRHSFPIKGLGEISYYLRCHITRDRKARTVTFDQQRYAQRRV----------IPVPTGKA-PLSKADGPQNGAEIAEMRGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVKY 227
            QLDV+ AFL  D+ E++++E P+G +   ++V +L K +YGL  AG  W K   G LI  GF+   +D C++                        + + DE + L   R  F IK LG + + L   I  DR  R ++ +Q  Y +  V          +  P  ++  LSKADGP++  + AEM   PYR  +G L +VA  TRPD+A+    L++F +NPGP HW A ++ L+YLK T   G+ Y
Sbjct:  103 QLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGRAGGDTTYICLYVDDMVVGGRTQTRVDEVKKLIAAR--FRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISY 348          
BLAST of mRNA_F-distichus_contig101114.85.1 vs. uniprot
Match: E2LZP6_MONPE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2LZP6_MONPE)

HSP 1 Score: 139 bits (349), Expect = 2.090e-34
Identity = 87/243 (35.80%), Postives = 128/243 (52.67%), Query Frame = 0
Query:    3 LAVMALLDWEGWQLDVERAFLEVDVTEELHVELPDGYRDS-PNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFER-----FQADPCVFRRKQDE-HQALEDLRHSFPIKGLGEISYYLRCHITRDRKARTVTFDQQRYAQRRVI--------PVPTGKAP---LSKADGPQNGAEIAEMRGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVKY 227
            LA+ A+ D     +D+  AF+  D+  E+++  P+G+R   P  V RL K +YGL  A  LW +K G  +      +     F  D  +  + +D   + +  L   F ++ LG  SY L   ITR+R  R +   Q++Y   ++         P  T   P   LSK+  PQ   E+ EM  IPY  AVG+L+++A MTRPD+AYTA  LA+F  NPG +HWKAV   L+YLK T  + ++Y
Sbjct:  201 LALAAVEDLHLRSIDISHAFINSDIDTEIYMTQPEGFRQGGPRIVCRLDKSLYGLKQAPRLWDEKLGIYIYQNDNVKVIVPVFVDDITLASKSEDMLDEFVAKLSKHFKLRDLGATSYLLGVEITRNRPERKLYLSQRQYIINKLEEFGMTDCKPATTPMTPNLILSKSQSPQTPDEVEEMSEIPYISAVGSLLYLATMTRPDIAYTASVLARFNSNPGMDHWKAVKHVLRYLKGTMDIKLEY 443          
BLAST of mRNA_F-distichus_contig101114.85.1 vs. uniprot
Match: H3G9E3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9E3_PHYRM)

HSP 1 Score: 133 bits (335), Expect = 6.920e-33
Identity = 89/256 (34.77%), Postives = 128/256 (50.00%), Query Frame = 0
Query:    2 ALAVMALLDWEGWQLDVERAFLEVDVTEELHVELPDGYRDSPNQVGR--LQKVMYGLMHAGLLWSKKFGGELIAKGFERFQADPCVF-RRKQDEHQAL----EDL-----------------RHSFPIKGLGEISYYLRCHITRDRKARTVTFDQQRYAQRRV--IPVPTGKAPLSKADGPQNGAEIAEMRGI----PYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVKY 227
            +LA  A  D E   +DV+ AFL  DV EEL+++ PDG+ D  N   +  L++ +YG   A   W+ K    L  +GF R  ADPCV+ RR  DE+  +    +DL                 +  F IK LGE+ Y L   I R+R+ +T+  +Q+ Y +R      V   KA  + AD      ++ E        PYRE VGALM++A  TRPD+A     +AKF +     HW A  + L+YLK T  +G+ +
Sbjct:   78 SLATAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQSNPAMKCLLKQALYGTKQAARQWNSKLNKHLEDQGFRRSDADPCVYVRRSTDEYSIVVIYVDDLMLFSKTKEHIESIKVALKKEFSIKELGELKYCLGIEIDRNREDKTILMNQRAYIKRLAEKFGVDKCKAVHTPADCNSKLVKMTEEEAFVAKYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDMGIVF 333          
BLAST of mRNA_F-distichus_contig101114.85.1 vs. uniprot
Match: A0A8J6L6Q6_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L6Q6_TENMO)

HSP 1 Score: 135 bits (339), Expect = 1.080e-32
Identity = 83/257 (32.30%), Postives = 127/257 (49.42%), Query Frame = 0
Query:    3 LAVMALLDWEGWQLDVERAFLEVDVTEELHVELPDGYRDS--PNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFERFQADPCVFRRKQDEHQAL----------------------EDLRHSFPIKGLGEISYYLRCHITRDRKARTVTFDQ--------QRYAQRRVIPVPTGKAPLSKADGPQNGAEIAEMRGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVKY 227
            +++ A  D +  QLDV+ AFL  D+ EEL+++ P G+  +   NQ+ +L+K MYGL      W+ K    L   GF R Q DPCV+ ++      L                        L   F +K LG++S  L  + TRD K  T+  DQ        +R+      PV T +    K D   N  E   +   PYREA+G L+++  ++RPD+A+  + L++F  NP   HW+AV + L+YLK T SL +++
Sbjct:  846 ISMAAKYDLKIHQLDVKNAFLHGDLKEELYIQQPTGFEQTGKENQICKLRKAMYGLKQGSRAWNSKLNSVLTKIGFTRSQTDPCVYTKRAGRKMELLAVYVDDILIFSNDDFATSSTKNSLNEKFHMKDLGQVSKCLGINFTRDWKRHTIHIDQSDYILNLLKRFKMEDSHPVRTPEDVNQKLDLHTNETETTPI--FPYREAIGGLLYLTQISRPDIAHAVNYLSRFNQNPDIVHWRAVKRILRYLKSTISLKMEF 1100          
BLAST of mRNA_F-distichus_contig101114.85.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 131 bits (329), Expect = 1.540e-32
Identity = 85/246 (34.55%), Postives = 120/246 (48.78%), Query Frame = 0
Query:   12 EGWQLDVERAFLEVDVTEELHVELPDGYRDSPNQVGR--LQKVMYGLMHAGLLWSKKFGGELIAKGFERFQADPCVFRRKQDEHQAL----------------------EDLRHSFPIKGLGEISYYLRCHITRDRKARTVTFDQQRYAQRRV--IPVPTGKAPLSKADGPQNGAEIAE----MRGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVKY 227
            E   +DV+ AFL  DV EEL+++ PDG+ D  N   +  L + +YG   A   W+ K    L  +GF R  ADPCV+ R+ D   ++                      + L+  F IK LGE+ Y L   I R+R  +T+  +Q+ Y QR      V   KA  + AD      + AE    +   PYRE VGALM++A  TRPD+A     +AKF +     HW A  + L+YLK T  LG+ +
Sbjct:    2 EAENVDVDTAFLYGDVEEELYMDQPDGFEDQVNPTKKCLLMQALYGTKQAARQWNSKLNKHLEGQGFHRSAADPCVYVRRSDSKFSIIIVYVDDLMIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKPAEDEVFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVF 247          
BLAST of mRNA_F-distichus_contig101114.85.1 vs. uniprot
Match: H3H9V9_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9V9_PHYRM)

HSP 1 Score: 133 bits (335), Expect = 2.630e-32
Identity = 88/256 (34.38%), Postives = 125/256 (48.83%), Query Frame = 0
Query:    2 ALAVMALLDWEGWQLDVERAFLEVDVTEELHVELPDGYRDSPNQVGR--LQKVMYGLMHAGLLWSKKFGGELIAKGFERFQADPCVFRRKQDEHQAL----------------------EDLRHSFPIKGLGEISYYLRCHITRDRKARTVTFDQQRYAQRRV--IPVPTGKAPLSKADGPQNGAEIAEMRGI----PYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVKY 227
            A+A+ A  D E   +DV+ AFL  DV EEL+++ PDG+ D  N   +  L + +YG   A   W+ K    L  +GF R  ADPCV+ R+ D   ++                      + L+  F IK LGE+ Y L   I R+R  +T+  +Q+ Y QR      V   KA  + AD      + +E        PYRE VGALM++A  TRPD+A     +AKF +     HW A  + L+YLK T  LG+ +
Sbjct:  412 AVAIAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQVNPTKKCLLMQALYGTKQAARQWNSKLNKHLEGQGFHRSAADPCVYVRRSDSKFSIIIVYVDDLMIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKPSEDEDFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCEWYNKSHWVAAKRILKYLKTTQDLGLVF 667          
BLAST of mRNA_F-distichus_contig101114.85.1 vs. uniprot
Match: A0A8J6HJQ3_TENMO (Integrase catalytic domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HJQ3_TENMO)

HSP 1 Score: 133 bits (334), Expect = 4.760e-32
Identity = 82/257 (31.91%), Postives = 126/257 (49.03%), Query Frame = 0
Query:    3 LAVMALLDWEGWQLDVERAFLEVDVTEELHVELPDGYRD--SPNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFERFQADPCVFRRKQDEHQAL----------------------EDLRHSFPIKGLGEISYYLRCHITRDRKARTVTFDQ--------QRYAQRRVIPVPTGKAPLSKADGPQNGAEIAEMRGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVKY 227
            +++ A  D +  QLDV+ AFL  D+ EEL+++ P G+      NQ+ +L+K MYGL      W+ K    L   GF R Q DPC++ ++      L                        L   F +K LG++S  L  + TRD K  T+  DQ        +R+      PV T +    K D   N  E   +   PYREA+G L+++  ++RPD+A+  + L++F  NP   HW+AV + L+YLK T SL +++
Sbjct:  512 ISMAAKYDLKIHQLDVKNAFLHGDLKEELYIQQPTGFEQPGKENQICKLRKAMYGLKQDSRAWNSKLNSVLTKIGFTRSQTDPCIYTKRAGRKIELLAVYVDDILIFSNDDFATSSTKNSLNEKFHMKDLGQVSKCLGINFTRDWKRHTIHIDQPDYILNLLKRFKMEDSHPVRTPEDVNQKLDLHTNETETTPI--FPYREAIGGLLYITQISRPDIAHAVNYLSRFNQNPDIVHWRAVKRILRYLKSTISLKMEF 766          
BLAST of mRNA_F-distichus_contig101114.85.1 vs. uniprot
Match: H3H7M7_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7M7_PHYRM)

HSP 1 Score: 132 bits (331), Expect = 1.250e-31
Identity = 85/248 (34.27%), Postives = 120/248 (48.39%), Query Frame = 0
Query:   10 DWEGWQLDVERAFLEVDVTEELHVELPDGYRDSPNQVGR--LQKVMYGLMHAGLLWSKKFGGELIAKGFERFQADPCVFRRKQDEHQAL----------------------EDLRHSFPIKGLGEISYYLRCHITRDRKARTVTFDQQRYAQRRV--IPVPTGKAPLSKADGPQNGAEIAEMRGI----PYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVKY 227
            D E   +DV+ AFL  DV EEL+++ PDG+ D  N   +  L + +YG   A   W+ K    L  +GF R  ADPCV+ R+ D   ++                      + L+  F IK LGE+ Y L   I R+R  +T+  +Q+ Y QR      V   KA  + AD      + +E        PYRE VGALM++A  TRPD+A     +AKF +     HW A  + L+YLK T  LG+ +
Sbjct:  769 DMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQVNPTKKCLLMQALYGTKQAARQWNSKLNKHLEGQGFHRSAADPCVYVRRSDSKFSIIIVYVDDLMIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEEFGVEKCKAVHTPADSNSKLVKPSEDEDFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTPDLGLVF 1016          
BLAST of mRNA_F-distichus_contig101114.85.1 vs. uniprot
Match: A0A6L2NYR2_TANCI (Retrotransposon protein, putative, Ty1-copia subclass (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2NYR2_TANCI)

HSP 1 Score: 131 bits (329), Expect = 2.280e-31
Identity = 78/258 (30.23%), Postives = 131/258 (50.78%), Query Frame = 0
Query:    3 LAVMALLDWEGWQLDVERAFLEVDVTEELHVELPDGYRDSPNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFERFQADPCVFRRKQDEH---------------------QALED-LRHSFPIKGLGEISYYLRCHITRDRKARTVTFDQQRYAQR----------RVIPVPTG-KAPLSKADGPQNGAEIAEMRGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVKY 227
            +A+ A  D+E WQ+DV+RAFL   + EE++++ P+ Y   PN+V +L++ +YGL  A   W+K+F  E+   GF + + +PCV+ +    +                     Q+++  L   F +K LGE +Y LR  I RDR  R +   Q  Y ++          +   +P   K  LSK  G    A++  M+ +PY   +G++M+    TRPD+A+  +  ++F  NPG  HW  +   L+YL+ T  + + Y
Sbjct:  213 IAIAAYYDYEIWQMDVKRAFLNGYLNEEVYMKQPEXY---PNRVCKLKRSIYGLKQASRQWNKRFDDEIKKFGFTQNRDEPCVYIKVSGSNITFLILYVDVILIMGNGIPMLQSVKTYLGKCFAMKDLGEAAYILRIKIYRDRSKRLIGLCQSAYIEKILKRYCMENSKRKSIPMQEKLKLSKPQGASTPAKMKRMQNVPYASTIGSIMYAVRCTRPDVAFAQNITSRFQQNPGDIHWTTIKNILKYLRNTKDMFLVY 467          
BLAST of mRNA_F-distichus_contig101114.85.1 vs. uniprot
Match: A0A8H7DH09_9AGAR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H7DH09_9AGAR)

HSP 1 Score: 128 bits (322), Expect = 9.200e-31
Identity = 78/259 (30.12%), Postives = 126/259 (48.65%), Query Frame = 0
Query:    1 MALAVMALLDWEGWQLDVERAFLEVDVTEELHVELPDGYRDSPNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFERFQADPCVFRRKQDEHQAL----------------------EDLRHSFPIKGLGEISYYLRCHITRDRKARTVTFDQQRYAQR----------RVIPVPTGKAPLSKADGPQNGAEIAEMRGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVKY 227
            + LA+ A  + E   +DV+ A+L  ++ EE++++ P+G+ D  ++V  L K +YGL  +G +W++         G++R   D CV+ R++DE   +                      ++L  SF I  LG+    L   I RDR   T+T  Q  Y  +           +I  P    P  K     +G    +++ + Y+  VGALM+ A  TRPD+AY   TL++F  NPGP H  AV +  +YL+ T +LG+ Y
Sbjct:  143 LLLALAARYNLEMHTVDVKGAYLNGELKEEIYMKQPEGFSDGTSRVWHLHKTIYGLKQSGRVWNETLDAHFKKHGYQRLLTDRCVYMRRKDEEMTIVAVHVDDMSIYASNCELIIRTEDELESSFQITRLGDAKQLLGMEIHRDRTRGTITITQSTYINKILAFHGMDSSNIIATPMD--PNVKLAKLPDGESHPDIKNV-YQSMVGALMYAAITTRPDIAYAVQTLSQFSSNPGPVHLTAVKRVYRYLRGTTNLGITY 398          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101114.85.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8K1CTN1_PYTOL5.980e-3534.27Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
E2LZP6_MONPE2.090e-3435.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3G9E3_PHYRM6.920e-3334.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8J6L6Q6_TENMO1.080e-3232.30Uncharacterized protein n=1 Tax=Tenebrio molitor T... [more]
H3GB17_PHYRM1.540e-3234.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H9V9_PHYRM2.630e-3234.38CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
A0A8J6HJQ3_TENMO4.760e-3231.91Integrase catalytic domain-containing protein n=1 ... [more]
H3H7M7_PHYRM1.250e-3134.27CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
A0A6L2NYR2_TANCI2.280e-3130.23Retrotransposon protein, putative, Ty1-copia subcl... [more]
A0A8H7DH09_9AGAR9.200e-3130.12Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..93
e-value: 9.5E-14
score: 51.6

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..93
e-value: 9.5E-14
score: 51.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101114contigF-distichus_contig101114:59..771 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101114.85.1mRNA_F-distichus_contig101114.85.1Fucus distichus monoicousmRNAF-distichus_contig101114 59..1002 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig101114.85.1 ID=prot_F-distichus_contig101114.85.1|Name=mRNA_F-distichus_contig101114.85.1|organism=Fucus distichus monoicous|type=polypeptide|length=227bp
MALAVMALLDWEGWQLDVERAFLEVDVTEELHVELPDGYRDSPNQVGRLQ
KVMYGLMHAGLLWSKKFGGELIAKGFERFQADPCVFRRKQDEHQALEDLR
HSFPIKGLGEISYYLRCHITRDRKARTVTFDQQRYAQRRVIPVPTGKAPL
SKADGPQNGAEIAEMRGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGD
NPGPEHWKAVMKALQYLKRTASLGVKY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2