prot_F-distichus_contig100608.54.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig100608.54.1
Unique Nameprot_F-distichus_contig100608.54.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length104
Homology
BLAST of mRNA_F-distichus_contig100608.54.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 99.4 bits (246), Expect = 4.380e-22
Identity = 47/95 (49.47%), Postives = 67/95 (70.53%), Query Frame = 0
Query:    9 VYKQVARPKDKLVIGTKMSYKQKNGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIWMLLAMAATKDGELRHFDAEQAFLKADTDEEI 103
            V+++V RP+D+ +IG+K  +K K G DG++EKYK RLVAQGF QVEG+ Y E ++P   + SI +LLA+AA  D E+   D + AFL  + +EEI
Sbjct: 1026 VFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEI 1120          
BLAST of mRNA_F-distichus_contig100608.54.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR)

HSP 1 Score: 97.1 bits (240), Expect = 2.750e-21
Identity = 50/103 (48.54%), Postives = 69/103 (66.99%), Query Frame = 0
Query:    1 MLGMVENCVYKQVARPKDKLVIGTKMSYKQKNGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIWMLLAMAATKDGELRHFDAEQAFLKADTDEEI 103
            +L  V+  +Y +V RP+D+ V+G K  ++ K G DG+IEKYK R+VA+GF QVEGV YT+ ++P    ASI  LLA+AA  D E+   D + AFL  + DEEI
Sbjct:  305 LLTFVKAELYDEVERPRDRKVVGCKWVFRIKRGPDGEIEKYKARVVAKGFTQVEGVDYTDTFAPVTKFASIRALLALAAKLDLEIHQMDVKSAFLNGNLDEEI 407          
BLAST of mRNA_F-distichus_contig100608.54.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 95.5 bits (236), Expect = 9.810e-21
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 0
Query:    1 MLGMVENCVYKQVARPKDKLVIGTKMSYKQKNGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIWMLLAMAATKDGELRHFDAEQAFLKADTDEEI 103
            +L   +  +Y +V RP+++ V+  K  ++ K+G DGKI+KYK RLVA+GF QVEGV YT+ ++P    ASI MLLA AA  D E+   D + AFL  D +EEI
Sbjct:  987 LLSFAKAELYDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAAKHDLEVHQMDVKSAFLNGDLEEEI 1089          
BLAST of mRNA_F-distichus_contig100608.54.1 vs. uniprot
Match: A0A2R6NNP3_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NNP3_9APHY)

HSP 1 Score: 95.1 bits (235), Expect = 1.020e-20
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 0
Query:    1 MLGMVENCVYKQVARPKDKLVIGTKMSYKQKNGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIWMLLAMAATKDGELRHFDAEQAFLKADTDEEI 103
            ML  V+  ++ +V  PK++ V+G+K  ++ K G +GKIEKYK RLVAQGF QV+G+ YTE ++P     SI  LL++AA  D E+   D + AFL  D DEEI
Sbjct:   17 MLAFVKANLFDEVECPKNRKVVGSKWVFRIKRGPNGKIEKYKARLVAQGFTQVKGIDYTETFAPVAKFISIRTLLSLAAKLDLEIHQMDVKSAFLNGDLDEEI 119          
BLAST of mRNA_F-distichus_contig100608.54.1 vs. uniprot
Match: A0A4Y9XTU1_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XTU1_9APHY)

HSP 1 Score: 95.1 bits (235), Expect = 1.340e-20
Identity = 49/103 (47.57%), Postives = 67/103 (65.05%), Query Frame = 0
Query:    1 MLGMVENCVYKQVARPKDKLVIGTKMSYKQKNGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIWMLLAMAATKDGELRHFDAEQAFLKADTDEEI 103
            +L   +  +Y +V RP+++ V+G K  +K K G DG+IEKYK RLVA+GF QVE V Y E ++PT   ++I  LLA+AA  D E+   D + AFL  D DEEI
Sbjct:  972 LLSFTKAELYDEVERPRNRKVVGCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEDVDYDETFAPTTKFSTIRTLLALAAAHDLEIHQMDVKSAFLNGDLDEEI 1074          
BLAST of mRNA_F-distichus_contig100608.54.1 vs. uniprot
Match: A0A8H7NTQ9_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NTQ9_9APHY)

HSP 1 Score: 92.8 bits (229), Expect = 8.570e-20
Identity = 46/95 (48.42%), Postives = 64/95 (67.37%), Query Frame = 0
Query:    9 VYKQVARPKDKLVIGTKMSYKQKNGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIWMLLAMAATKDGELRHFDAEQAFLKADTDEEI 103
            +Y +V RP+D+ V+  K  +K K G DG+I+KYK RLVA+GF QVEG+ +TE ++P    AS+  LLA+AA  D E+   D + AFL  D +EEI
Sbjct:  655 LYDEVERPRDRKVVDCKWVFKIKRGPDGEIKKYKARLVAKGFTQVEGIDFTETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLEEEI 749          
BLAST of mRNA_F-distichus_contig100608.54.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 91.7 bits (226), Expect = 2.200e-19
Identity = 46/95 (48.42%), Postives = 63/95 (66.32%), Query Frame = 0
Query:    9 VYKQVARPKDKLVIGTKMSYKQKNGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIWMLLAMAATKDGELRHFDAEQAFLKADTDEEI 103
            +Y +V +P+ + V+G K  +K K G DG IEKYK RLVA+GF QVEG+ YT+ ++P    ASI  +LA+AA  D ++   D + AFL  D DEEI
Sbjct: 1020 LYDEVEKPRGRKVVGCKWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEI 1114          
BLAST of mRNA_F-distichus_contig100608.54.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 91.7 bits (226), Expect = 2.210e-19
Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 0
Query:    9 VYKQVARPKDKLVIGTKMSYKQKNGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIWMLLAMAATKDGELRHFDAEQAFLKADTDEEI 103
            +Y +V RP+++ VI  K  +K K G DG+IEKYK RLVA+GF QVEG+ + E ++P    AS+  LLA+AA  D E+   D + AFL  D DEEI
Sbjct:  957 LYDEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEI 1051          
BLAST of mRNA_F-distichus_contig100608.54.1 vs. uniprot
Match: A0A401H317_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H317_9APHY)

HSP 1 Score: 91.3 bits (225), Expect = 2.970e-19
Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 0
Query:    9 VYKQVARPKDKLVIGTKMSYKQKNGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIWMLLAMAATKDGELRHFDAEQAFLKADTDEEI 103
            +Y +V RP+++ VI  K  +K K G DG+IEKYK RLVA+GF QVEG+ + E ++P    AS+  LLA+AA  D E+   D + AFL  D DEEI
Sbjct:  898 LYDEVERPQNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEI 992          
BLAST of mRNA_F-distichus_contig100608.54.1 vs. uniprot
Match: A0A060SUY4_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SUY4_PYCCI)

HSP 1 Score: 91.3 bits (225), Expect = 2.980e-19
Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = 0
Query:   10 YKQVARPKDKLVIGTKMSYKQKNGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSTASIWMLLAMAATKDGELRHFDAEQAFLKADTDEEI 103
            Y +V RP+++ V+G K  ++ K G DG +E+YK RLVAQGF QVEG+ Y+E ++P    ASI  +L +AA  D E+   D + AFL  D DEEI
Sbjct:  962 YDEVERPQNRKVVGCKWVFRLKRGADGSVERYKARLVAQGFTQVEGIDYSEMFAPVSKFASIRTVLTLAALFDLEIDQMDVKSAFLNGDLDEEI 1055          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig100608.54.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C2WN23_AMAMK4.380e-2249.47Integrase catalytic domain-containing protein (Fra... [more]
A0A1C7MSU6_GRIFR2.750e-2148.54Retrovirus-related Pol polyprotein from transposon... [more]
A0A060SSE0_PYCCI9.810e-2147.57Integrase catalytic domain-containing protein n=1 ... [more]
A0A2R6NNP3_9APHY1.020e-2047.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y9XTU1_9APHY1.340e-2047.57Integrase catalytic domain-containing protein n=1 ... [more]
A0A8H7NTQ9_9APHY8.570e-2048.42Integrase catalytic domain-containing protein n=1 ... [more]
A0A1M2VV58_TRAPU2.200e-1948.42Retrovirus-related Pol polyprotein from transposon... [more]
A0A401G4V0_9APHY2.210e-1949.47Retrovirus-related Pol polyprotein from transposon... [more]
A0A401H317_9APHY2.970e-1949.47Retrovirus-related Pol polyprotein from transposon... [more]
A0A060SUY4_PYCCI2.980e-1947.87Uncharacterized protein n=1 Tax=Pycnoporus cinnaba... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..103
e-value: 2.8E-20
score: 73.0
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 13..103
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 13..103

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..103
e-value: 2.8E-20
score: 73.0
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 13..103
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 13..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig100608contigF-distichus_contig100608:1494..1805 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig100608.54.1mRNA_F-distichus_contig100608.54.1Fucus distichus monoicousmRNAF-distichus_contig100608 1485..2027 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig100608.54.1 ID=prot_F-distichus_contig100608.54.1|Name=mRNA_F-distichus_contig100608.54.1|organism=Fucus distichus monoicous|type=polypeptide|length=104bp
MLGMVENCVYKQVARPKDKLVIGTKMSYKQKNGQDGKIEKYKCRLVAQGF
WQVEGVHYTEKYSPTPSTASIWMLLAMAATKDGELRHFDAEQAFLKADTD
EEI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like