prot_F-distichus_contig1003.31.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig1003.31.1
Unique Nameprot_F-distichus_contig1003.31.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length44
Homology
[Close]
BLAST of mRNA_F-distichus_contig1003.31.1 vs. uniprot
Match: A0A482UT74_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UT74_9ARCH)

HSP 1 Score: 60.1 bits (144), Expect = 1.420e-10
Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 0 
Query:    1 RLAPSQTGDLLHTYRGHSTEIVCLSFDPHGTKIATGSM 38
            +L  +++G LL+TYRGH+TEIVCLSF+PHGT IATG +
Sbjct:   37 KLWNAESGQLLYTYRGHATEIVCLSFNPHGTSIATGMV 74
[Close]
BLAST of mRNA_F-distichus_contig1003.31.1 vs. uniprot
Match: V9L7Y8_CALMI (Outer row dynein assembly protein 16-like protein (Fragment) n=1 Tax=Callorhinchus milii TaxID=7868 RepID=V9L7Y8_CALMI)

HSP 1 Score: 60.8 bits (146), Expect = 8.030e-10
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 0 
Query:    1 RLAPSQTGDLLHTYRGHSTEIVCLSFDPHGTKIATGSMDNTA 42
            +L  S+TG   HT+RGH+ EIVCLSF+P  T +ATGSMD TA
Sbjct:    4 KLWSSETGKCFHTFRGHTAEIVCLSFNPQSTLVATGSMDTTA 45
[Close]
BLAST of mRNA_F-distichus_contig1003.31.1 vs. uniprot
Match: A0A7K9KUM1_9PASS (DAW1 factor (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A7K9KUM1_9PASS)

HSP 1 Score: 59.3 bits (142), Expect = 1.410e-9
Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:    7 TGDLLHTYRGHSTEIVCLSFDPHGTKIATGSMDNTAR 43
            TG   HT+RGHS EIVCLSF+P  T +ATGSMD TA+
Sbjct:    1 TGQCYHTFRGHSAEIVCLSFNPQSTLLATGSMDTTAK 37
[Close]
BLAST of mRNA_F-distichus_contig1003.31.1 vs. uniprot
Match: A0A7L2DBA5_CATFU (DAW1 factor (Fragment) n=6 Tax=Passeriformes TaxID=9126 RepID=A0A7L2DBA5_CATFU)

HSP 1 Score: 59.3 bits (142), Expect = 1.410e-9
Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:    7 TGDLLHTYRGHSTEIVCLSFDPHGTKIATGSMDNTAR 43
            TG   HT+RGHS EIVCLSF+P  T +ATGSMD TA+
Sbjct:    1 TGQCYHTFRGHSAEIVCLSFNPQSTLLATGSMDTTAK 37
[Close]
BLAST of mRNA_F-distichus_contig1003.31.1 vs. uniprot
Match: A0A7K7GV26_ERIRU (DAW1 factor (Fragment) n=1 Tax=Erithacus rubecula TaxID=37610 RepID=A0A7K7GV26_ERIRU)

HSP 1 Score: 59.3 bits (142), Expect = 1.450e-9
Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:    7 TGDLLHTYRGHSTEIVCLSFDPHGTKIATGSMDNTAR 43
            TG   HT+RGHS EIVCLSF+P  T +ATGSMD TA+
Sbjct:    1 TGQCYHTFRGHSAEIVCLSFNPQSTLLATGSMDTTAK 37
[Close]
BLAST of mRNA_F-distichus_contig1003.31.1 vs. uniprot
Match: A0A7K8EIY9_LEURO (DAW1 factor (Fragment) n=5 Tax=Passeriformes TaxID=9126 RepID=A0A7K8EIY9_LEURO)

HSP 1 Score: 59.3 bits (142), Expect = 1.470e-9
Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:    7 TGDLLHTYRGHSTEIVCLSFDPHGTKIATGSMDNTAR 43
            TG   HT+RGHS EIVCLSF+P  T +ATGSMD TA+
Sbjct:    1 TGQCYHTFRGHSAEIVCLSFNPQSTLLATGSMDTTAK 37
[Close]
BLAST of mRNA_F-distichus_contig1003.31.1 vs. uniprot
Match: A0A7K4XSR9_REGSA (DAW1 factor (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A7K4XSR9_REGSA)

HSP 1 Score: 58.9 bits (141), Expect = 1.840e-9
Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:    7 TGDLLHTYRGHSTEIVCLSFDPHGTKIATGSMDNTAR 43
            TG   HT+RGHS EIVCLSF+P  T +ATGSMD TA+
Sbjct:    1 TGKCCHTFRGHSAEIVCLSFNPQSTLLATGSMDTTAK 37
[Close]
BLAST of mRNA_F-distichus_contig1003.31.1 vs. uniprot
Match: A0A7K7XTP1_9PASS (DAW1 factor (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A7K7XTP1_9PASS)

HSP 1 Score: 58.9 bits (141), Expect = 1.860e-9
Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:    7 TGDLLHTYRGHSTEIVCLSFDPHGTKIATGSMDNTAR 43
            TG   HT+RGHS EIVCLSF+P  T +ATGSMD TA+
Sbjct:    1 TGKCYHTFRGHSAEIVCLSFNPQSTLLATGSMDTTAK 37
[Close]
BLAST of mRNA_F-distichus_contig1003.31.1 vs. uniprot
Match: A0A7K4V384_9EMBE (DAW1 factor (Fragment) n=1 Tax=Emberiza fucata TaxID=337179 RepID=A0A7K4V384_9EMBE)

HSP 1 Score: 58.9 bits (141), Expect = 1.950e-9
Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:    7 TGDLLHTYRGHSTEIVCLSFDPHGTKIATGSMDNTAR 43
            TG   HT+RGHS EIVCLSF+P  T +ATGSMD TA+
Sbjct:    1 TGKCYHTFRGHSAEIVCLSFNPQSTLLATGSMDTTAK 37
[Close]
BLAST of mRNA_F-distichus_contig1003.31.1 vs. uniprot
Match: A0A852I199_9PASS (DAW1 factor (Fragment) n=7 Tax=Passeriformes TaxID=9126 RepID=A0A852I199_9PASS)

HSP 1 Score: 58.9 bits (141), Expect = 1.970e-9
Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:    7 TGDLLHTYRGHSTEIVCLSFDPHGTKIATGSMDNTAR 43
            TG   HT+RGHS EIVCLSF+P  T +ATGSMD TA+
Sbjct:    1 TGKCYHTFRGHSAEIVCLSFNPQSTLLATGSMDTTAK 37
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig1003.31.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482UT74_9ARCH1.420e-1065.79Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
V9L7Y8_CALMI8.030e-1061.90Outer row dynein assembly protein 16-like protein ... [more]
A0A7K9KUM1_9PASS1.410e-967.57DAW1 factor (Fragment) n=2 Tax=Passeriformes TaxID... [more]
A0A7L2DBA5_CATFU1.410e-967.57DAW1 factor (Fragment) n=6 Tax=Passeriformes TaxID... [more]
A0A7K7GV26_ERIRU1.450e-967.57DAW1 factor (Fragment) n=1 Tax=Erithacus rubecula ... [more]
A0A7K8EIY9_LEURO1.470e-967.57DAW1 factor (Fragment) n=5 Tax=Passeriformes TaxID... [more]
A0A7K4XSR9_REGSA1.840e-967.57DAW1 factor (Fragment) n=2 Tax=Passeriformes TaxID... [more]
A0A7K7XTP1_9PASS1.860e-967.57DAW1 factor (Fragment) n=2 Tax=Passeriformes TaxID... [more]
A0A7K4V384_9EMBE1.950e-967.57DAW1 factor (Fragment) n=1 Tax=Emberiza fucata Tax... [more]
A0A852I199_9PASS1.970e-967.57DAW1 factor (Fragment) n=7 Tax=Passeriformes TaxID... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 7..41
e-value: 0.0065
score: 25.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 8..43
e-value: 5.1E-9
score: 36.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 14..43
score: 11.812
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..43
e-value: 1.1E-10
score: 43.3
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..43
score: 11.287
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 6..43

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 7..41
e-value: 0.0065
score: 25.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 8..43
e-value: 5.1E-9
score: 36.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 14..43
score: 11.812
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..43
e-value: 1.1E-10
score: 43.3
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..43
score: 11.287
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 6..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig1003contigF-distichus_contig1003:15810..15941 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig1003.31.1mRNA_F-distichus_contig1003.31.1Fucus distichus monoicousmRNAF-distichus_contig1003 15810..15941 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig1003.31.1 ID=prot_F-distichus_contig1003.31.1|Name=mRNA_F-distichus_contig1003.31.1|organism=Fucus distichus monoicous|type=polypeptide|length=44bp
RLAPSQTGDLLHTYRGHSTEIVCLSFDPHGTKIATGSMDNTAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf