prot_F-distichus_contig10.3.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10.3.1
Unique Nameprot_F-distichus_contig10.3.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length243
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 133..152
e-value: 7.9E-4
score: 17.2
coord: 35..52
e-value: 3.5E-6
score: 24.6
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 37..52
e-value: 0.0033
score: 17.8

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 133..152
e-value: 7.9E-4
score: 17.2
coord: 35..52
e-value: 3.5E-6
score: 24.6
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 37..52
e-value: 0.0033
score: 17.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10contigF-distichus_contig10:22810..29885 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10.3.1mRNA_F-distichus_contig10.3.1Fucus distichus monoicousmRNAF-distichus_contig10 22810..29885 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10.3.1 ID=prot_F-distichus_contig10.3.1|Name=mRNA_F-distichus_contig10.3.1|organism=Fucus distichus monoicous|type=polypeptide|length=243bp
MTHDGITYFVGNEGTYSGGGIYVSWFSELLLTEGGTVSFCNNHAGENGGA
IYIHDRSEGNFMGNVSFEVNHANDSGGAICLYLESIIHVDGMTSFVGNEA
INNGGVVYIVDDCNASFGGAVYIDEASNASFGGETVFANNTAEIGGALYS
SDSALYVEAGTRFMFNVASTGSGGGVYASKTVMSLNNTVFTGNRGVWGGG
VASFSSGSIWDEENNDFGPSNITGCRFDCNKATDGGAIYTAAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat