mRNA_F-distichus_contig99582.19400.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig99582.19400.1 vs. uniprot
Match: A0A165BJT7_EXIGL (Uncharacterized protein (Fragment) n=2 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165BJT7_EXIGL) HSP 1 Score: 83.6 bits (205), Expect = 3.050e-16 Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 13 EPQSLRQAMESPEWECWQAAEKPEIGGLISRGVWTNCPCPKEKVVLGTKQLYSRESGERREVVKHKCRFFTQSFRQIKGLHCEDSSSPTPAAASIRMALATAAVIDMELRHIDFKQAY 366
EP++L +A P+W W+ A + E+ L + G W P V+G+K ++ + VV+HK R Q F Q+ G+ D+ +P ASIR+ LA AA +D+EL ID K AY
Sbjct: 677 EPRTLSEAQRRPDWTLWEQAIREELATLDAMGTWELVDAPAGANVVGSKWVFRAKKDATGSVVRHKARLVAQGFSQVPGVDYFDTFAPVAKLASIRIVLAMAARLDLELHQIDIKGAY 794
BLAST of mRNA_F-distichus_contig99582.19400.1 vs. uniprot
Match: A0A6G0WKF3_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WKF3_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 3.310e-13 Identity = 37/121 (30.58%), Postives = 67/121 (55.37%), Query Frame = 1
Query: 4 LPPEPQSLRQAMESPEWECWQAAEKPEIGGLISRGVWTNCPCPKEKVVLGTKQLYSRESGERREVVKHKCRFFTQSFRQIKGLHCEDSSSPTPAAASIRMALATAAVIDMELRHIDFKQAY 366
L P PQS ++AM SP+W W+AAE+ E+ L++ WT P ++ ++ + Y+R++ +++ K R+ + F Q++G+ ++SSS S+R LA A ++ + D AY
Sbjct: 309 LHPVPQSHKEAMASPDWRNWKAAEEAEVAQLLALKTWTVAKPPVDRKIIRGRWTYARKTDAAGNIIRWKARWVLKGFNQVEGVDYDESSSNVIKMTSVRAILAVATARNLVIEQADAINAY 429
BLAST of mRNA_F-distichus_contig99582.19400.1 vs. uniprot
Match: UPI0005F450C0 (MAGUK p55 subfamily member 6-like n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F450C0) HSP 1 Score: 74.3 bits (181), Expect = 4.710e-13 Identity = 40/119 (33.61%), Postives = 63/119 (52.94%), Query Frame = 1
Query: 10 PEPQSLRQAMESPEWECWQAAEKPEIGGLISRGVWTNCPCPKEKVVLGTKQLYSRESGERREVVKHKCRFFTQSFRQIKGLHCEDSSSPTPAAASIRMALATAAVIDMELRHIDFKQAY 366
P+P +L++A+ES E + WQ A+K E L W P + L K ++ + +V ++K R F QI+GL E++ SP ASIR+ LA A +D+E+ H+D A+
Sbjct: 88 PDPITLQEAIESEECDSWQQAKKSEFNALTENKTWKLVDLPPGRKPLKNKWVFKTKRDSNNDVERYKARLVVIGFSQIRGLDYEETYSPVVRYASIRLLLALAVKMDLEVDHLDVVTAF 206
BLAST of mRNA_F-distichus_contig99582.19400.1 vs. uniprot
Match: A0A0J7NHJ8_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7NHJ8_LASNI) HSP 1 Score: 72.8 bits (177), Expect = 1.820e-12 Identity = 39/120 (32.50%), Postives = 64/120 (53.33%), Query Frame = 1
Query: 7 PPEPQSLRQAMESPEWECWQAAEKPEIGGLISRGVWTNCPCPKEKVVLGTKQLYSRESGERREVVKHKCRFFTQSFRQIKGLHCEDSSSPTPAAASIRMALATAAVIDMELRHIDFKQAY 366
P +P +L++A+ES + WQ A + E L+ W P + L K ++ + +V ++K R + F Q+KGL E++ SP ASIR+ LA AA +D+E+ H+D A+
Sbjct: 785 PDDPITLQEALESEACDSWQQAMRNEYDALLENKTWDLVDLPPGRKPLKCKWVFKTKRDSNNDVERYKARLVVKGFSQVKGLDYEETYSPVVRYASIRILLALAAKLDLEVDHLDVVTAF 904
BLAST of mRNA_F-distichus_contig99582.19400.1 vs. uniprot
Match: A0A6A4ZD37_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZD37_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.160e-11 Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 1
Query: 10 PEPQSLRQAMESPEWECWQAAEKPEIGGLISRGVWT-NCPCPKEKVVLGTKQLYSRESGERREVVKHKCRFFTQSFRQIKGLHCEDSSSPTPAAASIRMALATAAVIDMELRHIDFKQAY 366
P P S R+AM SP+W W+AAE+ E+ L++ WT P P KV+ G + Y+R++ V++ K R+ + F QI G+ ++SSS SIR A A M + D AY
Sbjct: 456 PVPNSHREAMASPDWRHWKAAEEAEVAQLLALKCWTVQTPPPGRKVIQG-RWTYARKTDAEGNVIRWKARWVLKGFSQIAGVDYDESSSNVIKMTSIRAICAVATSRRMVIEQADAVNAY 574
BLAST of mRNA_F-distichus_contig99582.19400.1 vs. uniprot
Match: E2M0C0_MONPE (Integrase catalytic domain-containing protein n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2M0C0_MONPE) HSP 1 Score: 69.3 bits (168), Expect = 2.950e-11 Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 1
Query: 16 PQSLRQAMESPEWECWQAAEKPEIGGLISRGVWTNCPCPKEKVVLGTKQLYSRESGERREVVKHKCRFFTQSFRQIKGLHCEDSSSPTPAAASIRMALATAAVIDMELRHIDFKQAY 366
PQ+L QA+ SPE + W A + E+ L + P P+++ GTK +++ + E+ V+H+ R Q F QI G+ D+ +P SIR AA +D E+ +D K A+
Sbjct: 583 PQTLAQALNSPERKYWVEAIEEELRRLAGTETYELVPRPEDRKPTGTKWVFNIKRDEQGRTVEHRARLVAQGFSQIPGVDFWDTYAPVARIESIRAIFGLAATLDWEIHVVDVKSAF 699
BLAST of mRNA_F-distichus_contig99582.19400.1 vs. uniprot
Match: A0A6G0WTM0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTM0_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.040e-10 Identity = 36/121 (29.75%), Postives = 65/121 (53.72%), Query Frame = 1
Query: 4 LPPEPQSLRQAMESPEWECWQAAEKPEIGGLISRGVWTNCPCPKEKVVLGTKQLYSRESGERREVVKHKCRFFTQSFRQIKGLHCEDSSSPTPAAASIRMALATAAVIDMELRHIDFKQAY 366
L P PQS ++AM SP+W W+AAE+ E+ L++ W P ++ V+ + Y+R++ +++ K R+ + F Q +G+ +++SS S+R LA A ++ + D AY
Sbjct: 995 LNPVPQSHKEAMASPDWRHWKAAEEAEVAQLLALKTWVVAKPPDDRKVIRGRWTYARKTDAMGNIIRWKARWVLKGFIQDEGVDYDETSSNVIKMTSMRAILAIATARNLVIEQADAINAY 1115
BLAST of mRNA_F-distichus_contig99582.19400.1 vs. uniprot
Match: V2XQZ8_MONRO (Gag-pol polyprotein n=1 Tax=Moniliophthora roreri (strain MCA 2997) TaxID=1381753 RepID=V2XQZ8_MONRO) HSP 1 Score: 63.9 bits (154), Expect = 2.300e-9 Identity = 36/117 (30.77%), Postives = 58/117 (49.57%), Query Frame = 1
Query: 16 PQSLRQAMESPEWECWQAAEKPEIGGLISRGVWTNCPCPKEKVVLGTKQLYSRESGERREVVKHKCRFFTQSFRQIKGLHCEDSSSPTPAAASIRMALATAAVIDMELRHIDFKQAY 366
PQ+L QA+ SPE + W A + E+ L + PCP+ + GTK +++ + E+ +V+H R Q F QI G+ D+ SI AA ++ E+ +D K A+
Sbjct: 868 PQTLAQALNSPERKYWVEAIEEELRHLAGTETYELVPCPESRKPTGTKWVFNIKRNEQGHIVEHHARLVAQGFSQIPGVDFWDTYVLVARIESIHAISGLAATLNWEIHVVDVKSAF 984
BLAST of mRNA_F-distichus_contig99582.19400.1 vs. uniprot
Match: A0A250XS43_9CHLO (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XS43_9CHLO) HSP 1 Score: 63.5 bits (153), Expect = 2.900e-9 Identity = 32/118 (27.12%), Postives = 59/118 (50.00%), Query Frame = 1
Query: 13 EPQSLRQAMESPEWECWQAAEKPEIGGLISRGVWTNCPCPKEKVVLGTKQLYSRESGERREVVKHKCRFFTQSFRQIKGLHCEDSSSPTPAAASIRMALATAAVIDMELRHIDFKQAY 366
EP +L +AM+SP+ E W+ A E+ L+ G W CP ++ K ++ + + + K R + F+Q +G+ + +P ++R L+ A D+EL+ +D K A+
Sbjct: 149 EPDTLTEAMDSPQAEEWRLAMTEEMASLMKNGTWKLVDCPLGVTLVPVKWVFKVKRDSSGNIERFKARLVAKGFKQREGIDYHEVYAPVSKHTTLRALLSLVATEDLELQQLDVKTAF 266
BLAST of mRNA_F-distichus_contig99582.19400.1 vs. uniprot
Match: A0A0J7K814_LASNI (Rna-dependent dna polymerase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K814_LASNI) HSP 1 Score: 63.5 bits (153), Expect = 3.120e-9 Identity = 31/115 (26.96%), Postives = 58/115 (50.43%), Query Frame = 1
Query: 22 SLRQAMESPEWECWQAAEKPEIGGLISRGVWTNCPCPKEKVVLGTKQLYSRESGERREVVKHKCRFFTQSFRQIKGLHCEDSSSPTPAAASIRMALATAAVIDMELRHIDFKQAY 366
S + A+ P+ + W A E+ ++++ W+ P+ + ++G++ + E ++ + K R + + Q GL + +P SIRM +A AA +DME+ HID AY
Sbjct: 889 STKSALHGPDSDDWYRAMSEEVKSILNKETWSIVNRPRNRSIVGSRFFLRNKYAEDGKIERRKARIVAKGYSQRPGLDFHATFAPVARMGSIRMIIALAAQLDMEIHHIDVTTAY 1003 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig99582.19400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig99582.19400.1 >prot_F-distichus_contig99582.19400.1 ID=prot_F-distichus_contig99582.19400.1|Name=mRNA_F-distichus_contig99582.19400.1|organism=Fucus distichus monoicous|type=polypeptide|length=123bp DLPPEPQSLRQAMESPEWECWQAAEKPEIGGLISRGVWTNCPCPKEKVVLback to top mRNA from alignment at F-distichus_contig99582:1494..1862+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig99582.19400.1 ID=mRNA_F-distichus_contig99582.19400.1|Name=mRNA_F-distichus_contig99582.19400.1|organism=Fucus distichus monoicous|type=mRNA|length=369bp|location=Sequence derived from alignment at F-distichus_contig99582:1494..1862+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig99582:1494..1862+ >mRNA_F-distichus_contig99582.19400.1 ID=mRNA_F-distichus_contig99582.19400.1|Name=mRNA_F-distichus_contig99582.19400.1|organism=Fucus distichus monoicous|type=CDS|length=738bp|location=Sequence derived from alignment at F-distichus_contig99582:1494..1862+ (Fucus distichus monoicous)back to top |