mRNA_F-distichus_contig99536.19397.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig99536.19397.1 vs. uniprot
Match: D7G5X9_ECTSI (D27-like_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5X9_ECTSI) HSP 1 Score: 199 bits (507), Expect = 4.660e-63 Identity = 90/108 (83.33%), Postives = 98/108 (90.74%), Query Frame = 1
Query: 1 FLVGPNNMDLRRDKTRGGVFVERCRFLEETNCKGLCTNMCKVPTERFFDETLGMRMAMEPNFDTYECRLSFGLEASPLEEDDTVPRGCLSRCSCKSLGAKVATTCSKQ 324
FLVGPN +D R+D T GGVFVERCRFLEETNCKGLCTNMCK+PTERFF+ETLG+ MAMEP+FDTYECRLSFGLE+ +EEDDTVPRGCLS CSCK LGA VATTCSKQ
Sbjct: 113 FLVGPNKLDARKDDTPGGVFVERCRFLEETNCKGLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLESPAMEEDDTVPRGCLSGCSCKELGAVVATTCSKQ 220
BLAST of mRNA_F-distichus_contig99536.19397.1 vs. uniprot
Match: D7G4X4_ECTSI (D27-like_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4X4_ECTSI) HSP 1 Score: 199 bits (507), Expect = 5.090e-62 Identity = 90/108 (83.33%), Postives = 98/108 (90.74%), Query Frame = 1
Query: 1 FLVGPNNMDLRRDKTRGGVFVERCRFLEETNCKGLCTNMCKVPTERFFDETLGMRMAMEPNFDTYECRLSFGLEASPLEEDDTVPRGCLSRCSCKSLGAKVATTCSKQ 324
FLVGPN +D R+D T GGVFVERCRFLEETNCKGLCTNMCK+PTERFF+ETLG+ MAMEP+FDTYECRLSFGLE+ +EEDDTVPRGCLS CSCK LGA VATTCSKQ
Sbjct: 192 FLVGPNKLDARKDDTPGGVFVERCRFLEETNCKGLCTNMCKIPTERFFEETLGLTMAMEPDFDTYECRLSFGLESPAMEEDDTVPRGCLSGCSCKELGAVVATTCSKQ 299
BLAST of mRNA_F-distichus_contig99536.19397.1 vs. uniprot
Match: A0A835Z2W0_9STRA (D27-like_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2W0_9STRA) HSP 1 Score: 173 bits (439), Expect = 3.370e-52 Identity = 76/108 (70.37%), Postives = 90/108 (83.33%), Query Frame = 1
Query: 1 FLVGPNNMDLRRDKTRGGVFVERCRFLEETNCKGLCTNMCKVPTERFFDETLGMRMAMEPNFDTYECRLSFGLEASPLEEDDTVPRGCLSRCSCKSLGAKVATTCSKQ 324
FLVGPN +D+R D T GGVFVERCRFLEETNCKGLCTNMCK+PT++FF +TLGM MAMEP+FDTYECRLSFGL P+++D VP+GCL CS +LGA++ CSKQ
Sbjct: 155 FLVGPNKLDMRSDGTAGGVFVERCRFLEETNCKGLCTNMCKLPTQKFFKDTLGMDMAMEPDFDTYECRLSFGLTPLPMDQDPKVPKGCLQGCSSTALGAEIERVCSKQ 262
BLAST of mRNA_F-distichus_contig99536.19397.1 vs. uniprot
Match: W7TNA9_9STRA (D27-like_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNA9_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.180e-39 Identity = 60/93 (64.52%), Postives = 75/93 (80.65%), Query Frame = 1
Query: 1 FLVGPNNMDLRRDKTRGGVFVERCRFLEETNCKGLCTNMCKVPTERFFDETLGMRMAMEPNFDTYECRLSFGLEASPLEEDDTVPRGCLSRCS 279
FLVGPN D+R D GGV+ ERCRFLEETNCKGLC +MCK+PT++FF ETLG+ M M P++DTYECRLSFGL +E+D ++P+GCL+ CS
Sbjct: 154 FLVGPNRYDVRDDGQAGGVYAERCRFLEETNCKGLCLHMCKLPTQQFFKETLGLDMTMTPDYDTYECRLSFGLAPKAVEDDPSIPKGCLTGCS 246
BLAST of mRNA_F-distichus_contig99536.19397.1 vs. uniprot
Match: A0A0K6S9X6_9ALVE (D27-like_C domain-containing protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0K6S9X6_9ALVE) HSP 1 Score: 134 bits (338), Expect = 2.900e-36 Identity = 63/111 (56.76%), Postives = 75/111 (67.57%), Query Frame = 1
Query: 1 FLVGPNNMDLRRDKTRGGVFVERCRFLEETNCKGLCTNMCKVPTERFFDETLGMRMAMEPNFDTYECRLSFGLEASPLEEDDTVPRGCLSRCSCKS----LGAKVATTCSK 321
FLVGP LR D+ GG +VERCRFL ET CKGLC NMCK PTERFF +T+G+ + M P+F+T EC LSFGL PLEED+TVP GCL C+ G A +C+K
Sbjct: 194 FLVGPTRWSLREDEQLGGCYVERCRFLAETGCKGLCVNMCKRPTERFFADTMGLPLTMRPDFETCECTLSFGLVPEPLEEDETVPSGCLGGCTMAGGLAEKGLVSACSCAK 304
BLAST of mRNA_F-distichus_contig99536.19397.1 vs. uniprot
Match: A0A7S0AGM3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AGM3_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.010e-31 Identity = 53/99 (53.54%), Postives = 67/99 (67.68%), Query Frame = 1
Query: 1 FLVGPNNMDLRRDKTR--GGVFVERCRFLEETNCKGLCTNMCKVPTERFFDETLGMRMAMEPNFDTYECRLSFGLEASPLEEDDTVPRGCLSRCSCKSL 291
FLVG + R +K GGV V RCR LE + CKG+C MCKVPT+RFF E G+ + M PNF+T EC+L FGLE P+E+D T+P GCL+RC +L
Sbjct: 50 FLVGEMTLTTRNEKDLRGGGVLVRRCRVLEGSGCKGICAKMCKVPTQRFFAEAWGVPLTMSPNFETGECQLVFGLEPQPIEDDPTIPPGCLTRCPASTL 148
BLAST of mRNA_F-distichus_contig99536.19397.1 vs. uniprot
Match: A0A8J6CH10_DIALT (D27-like_C domain-containing protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CH10_DIALT) HSP 1 Score: 117 bits (294), Expect = 1.830e-29 Identity = 55/108 (50.93%), Postives = 75/108 (69.44%), Query Frame = 1
Query: 1 FLVGPNNMDLRRDKTRGGVFVERCRFLEETNCKGLCTNMCKVPTERFFDETLGMRMAMEPNFDTYECRLSFGLEASPLEEDDTVPRGCLSRC-SCKSLG-AKVATTCS 318
FLVGP+ + R D GG+ VE+CRFL+E+ CKGLC + CK+P +RFF E LG+ + + PNF+T EC+ SFG E P+E+D ++P GCL+ C S K+L AK CS
Sbjct: 266 FLVGPSTPNYRADGELGGLVVEKCRFLQESGCKGLCVHQCKLPAQRFFAEDLGLPLTVSPNFETQECQWSFGEEPLPVEQDVSLPTGCLAGCPSRKALSEAKACNKCS 373
BLAST of mRNA_F-distichus_contig99536.19397.1 vs. uniprot
Match: A0A7S0DRR4_9EUKA (Hypothetical protein n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DRR4_9EUKA) HSP 1 Score: 118 bits (295), Expect = 5.360e-29 Identity = 55/107 (51.40%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 1 FLVGPNNMDLRRD-KTRGGVFVERCRFLEETNCKGLCTNMCKVPTERFFDETLGMRMAMEPNFDTYECRLSFGLEASPLEEDDTVPRGCLSRC-SCKSLGAKVATTC 315
FLVGP+ ++ RD + GV V++CRFL ET CKGLC NMCK+PT+RFF + +G M M PNFDT +C LS+G+ PLEED VP+ CL C + +G TC
Sbjct: 40 FLVGPSGLNTTRDGRPFQGVTVQKCRFLAETGCKGLCVNMCKIPTQRFFQDEMGFPMEMRPNFDTCQCTLSYGITPMPLEEDVDVPQACLVGCQNLLQMGEASTDTC 146
BLAST of mRNA_F-distichus_contig99536.19397.1 vs. uniprot
Match: A0A1E7FNX2_9STRA (D27-like_C domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNX2_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.630e-28 Identity = 49/104 (47.12%), Postives = 73/104 (70.19%), Query Frame = 1
Query: 1 FLVGPNNMDLRRDKTRGGVFVERCRFLEETNCKGLCTNMCKVPTERFFDETLGMRMAMEPNFDTYECRLSFGLEASPLEEDDTVPRGCLSRC-SCKSLGAKVAT 309
FLVGP+ + R+D RGG+ VE+C+FL+E+ CKG+C + CK+PT++FF + LG+ + + PNF T EC+ SFG P ED++ P+GCL C S K++ A +T
Sbjct: 37 FLVGPSYPNRRKDGKRGGLVVEKCKFLQESGCKGICLHDCKLPTQQFFQDELGLPLTVIPNFATQECQWSFGETPVPPSEDESFPKGCLVGCESRKAIAASGST 140
BLAST of mRNA_F-distichus_contig99536.19397.1 vs. uniprot
Match: A0A7S2G560_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G560_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.900e-28 Identity = 51/108 (47.22%), Postives = 74/108 (68.52%), Query Frame = 1
Query: 1 FLVGPNNMDLRRDKTRGGVFVERCRFLEETNCKGLCTNMCKVPTERFFDETLGMRMAMEPNFDTYECRLSFGLEASPLEEDDTVPRGCL----SRCSCKSLGAKVATT 312
FLVGP+ ++ R D GG+ V++C+FL+E+NCKG+C N CK+P ++ F E LG+ + + PNF+T EC+ SFG A P E+D T P+GC+ SR + K L A VA +
Sbjct: 66 FLVGPSRVNFRSDGQPGGLVVDKCKFLQESNCKGMCLNSCKLPAQQLFSE-LGLPLRVLPNFETQECQWSFGEAAPPPEDDPTWPQGCIAGCTSRAAMKELSAGVAAS 172 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig99536.19397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig99536.19397.1 >prot_F-distichus_contig99536.19397.1 ID=prot_F-distichus_contig99536.19397.1|Name=mRNA_F-distichus_contig99536.19397.1|organism=Fucus distichus monoicous|type=polypeptide|length=102bp MDLRRDKTRGGVFVERCRFLEETNCKGLCTNMCKVPTERFFDETLGMRMAback to top mRNA from alignment at F-distichus_contig99536:906..1740+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig99536.19397.1 ID=mRNA_F-distichus_contig99536.19397.1|Name=mRNA_F-distichus_contig99536.19397.1|organism=Fucus distichus monoicous|type=mRNA|length=835bp|location=Sequence derived from alignment at F-distichus_contig99536:906..1740+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig99536:906..1740+ >mRNA_F-distichus_contig99536.19397.1 ID=mRNA_F-distichus_contig99536.19397.1|Name=mRNA_F-distichus_contig99536.19397.1|organism=Fucus distichus monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at F-distichus_contig99536:906..1740+ (Fucus distichus monoicous)back to top |