mRNA_F-distichus_contig99446.19387.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig99446.19387.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI) HSP 1 Score: 194 bits (492), Expect = 8.500e-56 Identity = 87/139 (62.59%), Postives = 97/139 (69.78%), Query Frame = 1
Query: 1 HDLYWALGDGGPQRDTLDHGQRTDGYYGMVVRISVPSKGSGYEIPEGNYAGPDDDPEEVLPEICANGFRNNWRCGFDRLTDELYCGDVGHNDIESIYKIECGNNYGWVRFEGSRCTEFSEDTYGPCADVDRSSFTFPYF 417
HD+YW GDG Q D +HGQ T G V+RISVP+ G+GYEIP GN A P LPEICA+GFRN WRC FDR TDELYCGDVGH +E I +ECGNNYGW RFEGSRC E E GPC D DRS+FTFP +
Sbjct: 254 HDIYWTTGDGASQTDPENHGQDTTNLLGSVMRISVPADGTGYEIPTGNLASP------ALPEICASGFRNPWRCSFDRETDELYCGDVGHTLVEEIDIVECGNNYGWSRFEGSRCQEAQESRDGPCLDTDRSAFTFPIY 386
BLAST of mRNA_F-distichus_contig99446.19387.1 vs. uniprot
Match: A0A6H5JZF5_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF5_9PHAE) HSP 1 Score: 179 bits (453), Expect = 1.880e-51 Identity = 85/140 (60.71%), Postives = 94/140 (67.14%), Query Frame = 1
Query: 4 DLYWALGDGGPQRDTLDHGQRTDGYYGMVVRISVPSKGSGYEIPEGNYAGPDDDPEEVLPEICANGFRNNWRCGFDRLTDELYCGDVGHNDIESIYKIECGNNYGWVRFEGSRCTEFSEDT-YGP-CADVDRSSFTFPYF 417
DLYW GDGGPQ D +H Q T G ++RI+VPS GSGY IP GNY G L EICA GFRN WRC FDR TD+LYCGDVGH +E I +ECGNNYGW RFEGSRC E E+ Y P C VDRS FTFP +
Sbjct: 255 DLYWTTGDGGPQTDYNNHAQDTQSMLGAMMRITVPSDGSGYTIPSGNYGG------GALDEICAIGFRNPWRCSFDRETDDLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVENNEYNPPCDGVDRSGFTFPLY 388
BLAST of mRNA_F-distichus_contig99446.19387.1 vs. uniprot
Match: D7G962_ECTSI (GSDH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G962_ECTSI) HSP 1 Score: 168 bits (425), Expect = 8.610e-48 Identity = 80/140 (57.14%), Postives = 88/140 (62.86%), Query Frame = 1
Query: 4 DLYWALGDGGPQRDTLDHGQRTDGYYGMVVRISVPSKGSGYEIPEGNYAGPDDDPEEVLPEICANGFRNNWRCGFDRLTDELYCGDVGHNDIESIYKIECGNNYGWVRFEGSRCTEFSEDTY--GPCADVDRSSFTFPYF 417
DLYW GDGGPQ D +H Q G ++RISVP+ G+GY IP GNY G EICA G RN WRC FDRL D+LYCGDVG E I +ECGNNYGW RFEGSRC E +D PC VDRS FTFP F
Sbjct: 246 DLYWTTGDGGPQTDPFNHSQDETTMLGAMMRISVPADGTGYTIPPGNYHG-------SKAEICAIGLRNPWRCSFDRLNDDLYCGDVGQISAEEINLVECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTFPLF 378
BLAST of mRNA_F-distichus_contig99446.19387.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI) HSP 1 Score: 172 bits (435), Expect = 1.420e-47 Identity = 81/140 (57.86%), Postives = 90/140 (64.29%), Query Frame = 1
Query: 4 DLYWALGDGGPQRDTLDHGQRTDGYYGMVVRISVPSKGSGYEIPEGNYAGPDDDPEEVLPEICANGFRNNWRCGFDRLTDELYCGDVGHNDIESIYKIECGNNYGWVRFEGSRCTEFSEDT-YGPCAD-VDRSSFTFPYF 417
DLYW GDGGPQ D +H Q T G ++RI+VPS G GY IP GNY G L EICA GFRN WRC FDR D LYCGDVGH +E I +ECGNNYGW RFEGSRC E ED + P D + RS FTFP +
Sbjct: 318 DLYWTTGDGGPQTDPENHSQDTQTMLGAMMRITVPSDGDGYTIPSGNYGG------GALDEICAIGFRNPWRCSFDRENDNLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVEDNEFNPACDGISRSGFTFPLY 451
BLAST of mRNA_F-distichus_contig99446.19387.1 vs. uniprot
Match: D7FJN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN8_ECTSI) HSP 1 Score: 161 bits (407), Expect = 3.350e-43 Identity = 79/142 (55.63%), Postives = 96/142 (67.61%), Query Frame = 1
Query: 1 HDLYWALGDGGPQRDTLDHGQRTDGYYGMVVRISVPSK-GSGYEIPEGN-YAGPDDDPEEVLPEICANGFRNNWRCGFDRLTDELYCGDVGHNDIESIYKIECGNNYGWVRFEGSRCTEFSEDTYGP-CADVDRSSFTFPYF 417
H+L+WA+GD GPQ DT D GQ + +G ++RI V S+ SGY IP GN ++G EICA G RN +RC FDRL D+LYCGDVGH D+ESI KIECGNNYGW +FEG RC + ED + C +DRS FTFP F
Sbjct: 307 HELFWAMGDSGPQLDTFDRGQDPNILHGSIIRIGVSSEMESGYSIPSGNPFSG-----GGGRGEICAQGMRNPYRCSFDRLNDDLYCGDVGHLDVESIKKIECGNNYGWRQFEGDRCMQQIEDQFPETCEFLDRSPFTFPEF 443
BLAST of mRNA_F-distichus_contig99446.19387.1 vs. uniprot
Match: A0A6H5KT40_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT40_9PHAE) HSP 1 Score: 150 bits (378), Expect = 1.260e-40 Identity = 72/127 (56.69%), Postives = 80/127 (62.99%), Query Frame = 1
Query: 43 DTLDHGQRTDGYYGMVVRISVPSKGSGYEIPEGNYAGPDDDPEEVLPEICANGFRNNWRCGFDRLTDELYCGDVGHNDIESIYKIECGNNYGWVRFEGSRCTEFSEDTY--GPCADVDRSSFTFPYF 417
D +H Q G ++RISVPS G+GY IP GNY G E+CA G RN WRCGFDRL D LYCGDVGH +E I IECGNNYGW RFEGSRC E +D PC VDRS FT+P F
Sbjct: 209 DPGNHSQDETTMLGAMMRISVPSDGTGYTIPPGNYPG-------AKAEVCAIGLRNPWRCGFDRLNDNLYCGDVGHTLVEEINLIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTYPLF 328
BLAST of mRNA_F-distichus_contig99446.19387.1 vs. uniprot
Match: D7FJP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP1_ECTSI) HSP 1 Score: 151 bits (382), Expect = 7.720e-40 Identity = 74/142 (52.11%), Postives = 89/142 (62.68%), Query Frame = 1
Query: 1 HDLYWALGDGGPQRDTLDHGQRTDGYYGMVVRISVPSK--GSGYEIPEGNYAGPDDDPEEVLPEICANGFRNNWRCGFDRLTDELYCGDVGHNDIESIYKIECGNNYGWVRFEGSRCTE-FSEDTYGPCADVDRSSFTFPYF 417
HD+YW +GDGGPQ D + Q +G +VRISVPS G+GYEIP GN P D PEICA G RN RC FD TDELYCGDVG + +E + IECG +YGW FEGSRC + F G C+ +DR+ + FP F
Sbjct: 322 HDIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPAGN---PFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDYGWRMFEGSRCNDGFEGYDGGECSGLDRADYAFPVF 460
BLAST of mRNA_F-distichus_contig99446.19387.1 vs. uniprot
Match: D7G960_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G960_ECTSI) HSP 1 Score: 147 bits (370), Expect = 6.760e-39 Identity = 73/140 (52.14%), Postives = 79/140 (56.43%), Query Frame = 1
Query: 4 DLYWALGDGGPQRDTLDHGQRTDGYYGMVVRISVPSKGSGYEIPEGNYAGPDDDPEEVLPEICANGFRNNWRCGFDRLTDELYCGDVGHNDIESIYKIECGNNYGWVRFEGSRCTEFSEDTY--GPCADVDRSSFTFPYF 417
DLYW GDGGPQ D +H Q G+GY IP GNY G EICA G RN WRC FDRL D+LYCGDVG +E I IECGNNYGW RFEGSRC E +D PC + RS FTFP F
Sbjct: 173 DLYWTTGDGGPQTDPFNHSQ----------------DGTGYTIPPGNYHG-------AKAEICAIGLRNPWRCSFDRLNDDLYCGDVGQISVEEINFIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGISRSGFTFPLF 289
BLAST of mRNA_F-distichus_contig99446.19387.1 vs. uniprot
Match: A0A6H5KS07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS07_9PHAE) HSP 1 Score: 139 bits (350), Expect = 1.570e-35 Identity = 70/141 (49.65%), Postives = 86/141 (60.99%), Query Frame = 1
Query: 1 HDLYWALGDGGPQRDTLDHGQRTDGYYGMVVRISVPSK-GSGYEIPEGNYAGPDDDPEEVLPEICANGFRNNWRCGFDRLTDELYCGDVGHNDIESIYKIECGNNYGWVRFEGSRCTEFSEDTYGP-CADVDRSSFTFPYF 417
H+L+WA+GD GPQ DT D GQ + +G ++RI V S+ GSG + G RN +RC FDRL D+LYCGDVGH D+ESI KIECGNNYGW +FEG RC + ED + C +DRS FTFP F
Sbjct: 222 HELFWAMGDSGPQLDTSDRGQDPNILHGSIIRIEVSSEMGSGDK----------------------EGMRNPYRCSFDRLNDDLYCGDVGHLDVESIKKIECGNNYGWRQFEGDRCMQQIEDQFPETCEFLDRSPFTFPEF 340
BLAST of mRNA_F-distichus_contig99446.19387.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI) HSP 1 Score: 121 bits (303), Expect = 3.280e-29 Identity = 55/99 (55.56%), Postives = 63/99 (63.64%), Query Frame = 1
Query: 4 DLYWALGDGGPQRDTLDHGQRTDGYYGMVVRISVPSKGSGYEIPEGNYAGPDDDPEEVLPEICANGFRNNWRCGFDRLTDELYCGDVGHNDIESIYKIE 300
DLYW GDGGPQ D +H Q G ++RISVP+ G+GY IP GNY G E+CA G RN WRCGFDRL D+LYCGDVGH +E I IE
Sbjct: 272 DLYWTTGDGGPQTDPFNHSQDETTMLGAMMRISVPADGTGYTIPSGNYPG-------AKAEVCAIGLRNPWRCGFDRLNDDLYCGDVGHTLVEEINFIE 363 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig99446.19387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig99446.19387.1 >prot_F-distichus_contig99446.19387.1 ID=prot_F-distichus_contig99446.19387.1|Name=mRNA_F-distichus_contig99446.19387.1|organism=Fucus distichus monoicous|type=polypeptide|length=139bp HDLYWALGDGGPQRDTLDHGQRTDGYYGMVVRISVPSKGSGYEIPEGNYAback to top mRNA from alignment at F-distichus_contig99446:946..2094+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig99446.19387.1 ID=mRNA_F-distichus_contig99446.19387.1|Name=mRNA_F-distichus_contig99446.19387.1|organism=Fucus distichus monoicous|type=mRNA|length=1149bp|location=Sequence derived from alignment at F-distichus_contig99446:946..2094+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig99446:946..2094+ >mRNA_F-distichus_contig99446.19387.1 ID=mRNA_F-distichus_contig99446.19387.1|Name=mRNA_F-distichus_contig99446.19387.1|organism=Fucus distichus monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at F-distichus_contig99446:946..2094+ (Fucus distichus monoicous)back to top |