mRNA_F-distichus_contig99381.19381.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig99381.19381.1 vs. uniprot
Match: D8LFY4_ECTSI (Elongation factor G, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFY4_ECTSI) HSP 1 Score: 204 bits (520), Expect = 9.020e-60 Identity = 100/111 (90.09%), Postives = 109/111 (98.20%), Query Frame = 1
Query: 1 QGVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQIESTVPLANMFQ 333
+GVESVLSNGVLAGFPVLGMKA+LVDGA+HDVDSSVMAFEIAGRAA REGLRKAGARLMEP+MQVD+ITPEEYMGDVIGDIN+RRG +VEL+DRNGLKQ+ESTVPLANMFQ
Sbjct: 621 KGVESVLSNGVLAGFPVLGMKAVLVDGAFHDVDSSVMAFEIAGRAACREGLRKAGARLMEPIMQVDIITPEEYMGDVIGDINSRRGSIVELSDRNGLKQVESTVPLANMFQ 731
BLAST of mRNA_F-distichus_contig99381.19381.1 vs. uniprot
Match: A0A836CHR4_9STRA (Elongation factor G, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHR4_9STRA) HSP 1 Score: 197 bits (502), Expect = 3.250e-57 Identity = 95/111 (85.59%), Postives = 107/111 (96.40%), Query Frame = 1
Query: 1 QGVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQIESTVPLANMFQ 333
+G+ESVL+NGVLAGFPVLG+KA LVDGAYHDVDSSVMAFEIAGRAA REGLRKAGARLMEP+M+VDV+TPEEYMGD+IGDIN+RRGQVVE+ DRNGLKQ+E+ VPLANMFQ
Sbjct: 620 KGIESVLANGVLAGFPVLGLKATLVDGAYHDVDSSVMAFEIAGRAATREGLRKAGARLMEPIMKVDVVTPEEYMGDIIGDINSRRGQVVEMIDRNGLKQVEAAVPLANMFQ 730
BLAST of mRNA_F-distichus_contig99381.19381.1 vs. uniprot
Match: A0A7S0IR20_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IR20_9EUKA) HSP 1 Score: 167 bits (422), Expect = 1.240e-50 Identity = 81/111 (72.97%), Postives = 99/111 (89.19%), Query Frame = 1
Query: 1 QGVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQIESTVPLANMFQ 333
+G+ESV+S+GVLAGFPV+G KA LVDGA+HDVDSSVMAFEIAGRAAAR+GLR+AGA+LMEP+M+V+V TPEE MGDVIGDIN+RRG + EL +R +K + + VPLANMFQ
Sbjct: 25 KGLESVMSSGVLAGFPVIGCKATLVDGAFHDVDSSVMAFEIAGRAAARKGLREAGAKLMEPLMKVEVTTPEESMGDVIGDINSRRGLIAELAERGNMKVVRAKVPLANMFQ 135
BLAST of mRNA_F-distichus_contig99381.19381.1 vs. uniprot
Match: A0A7S3LBD3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBD3_9STRA) HSP 1 Score: 173 bits (438), Expect = 1.290e-50 Identity = 85/111 (76.58%), Postives = 98/111 (88.29%), Query Frame = 1
Query: 1 QGVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQIESTVPLANMFQ 333
+G+ESVL GV+AGFPVLG+KA L+DGAYHDVDSSVMAFEIAGRAAAREGLRKA ARLMEP+MQVD+ TPEEYMGD++GDIN+RRG V EL +R +K I + VPLANMFQ
Sbjct: 241 KGIESVLGTGVIAGFPVLGLKATLLDGAYHDVDSSVMAFEIAGRAAAREGLRKAKARLMEPLMQVDITTPEEYMGDILGDINSRRGLVGELGERGNVKTISAQVPLANMFQ 351
BLAST of mRNA_F-distichus_contig99381.19381.1 vs. uniprot
Match: A0A7S1GRX9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GRX9_CYCTE) HSP 1 Score: 172 bits (436), Expect = 5.960e-50 Identity = 85/111 (76.58%), Postives = 98/111 (88.29%), Query Frame = 1
Query: 1 QGVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQIESTVPLANMFQ 333
+G+ESVL +GV+AG+PVLGMKA LVDGAYHDVDSSVMAFEIAGRAA REGLRKA ARLMEP+MQVDV TPEEYMGD++GDIN+RRG V +L +R +K I + VPLANMFQ
Sbjct: 271 KGIESVLGSGVIAGYPVLGMKATLVDGAYHDVDSSVMAFEIAGRAATREGLRKAKARLMEPLMQVDVTTPEEYMGDILGDINSRRGLVGDLGERGNVKTISAQVPLANMFQ 381
BLAST of mRNA_F-distichus_contig99381.19381.1 vs. uniprot
Match: A0A7S2FQT5_9STRA (Elongation factor G, mitochondrial n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FQT5_9STRA) HSP 1 Score: 176 bits (446), Expect = 8.590e-50 Identity = 88/111 (79.28%), Postives = 96/111 (86.49%), Query Frame = 1
Query: 1 QGVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQIESTVPLANMFQ 333
+G+ESVLS+G +AGFPVLGMKA L+DGAYHDVDSSVMAFEIAGR AAREGLRK G RLMEP+MQVDV TPEEYMGDVIGDI ARRG VVEL +R K IE+ VPL NMFQ
Sbjct: 497 KGIESVLSSGPIAGFPVLGMKATLIDGAYHDVDSSVMAFEIAGRMAAREGLRKGGGRLMEPLMQVDVTTPEEYMGDVIGDITARRGMVVELGERGNTKTIEALVPLGNMFQ 607
BLAST of mRNA_F-distichus_contig99381.19381.1 vs. uniprot
Match: W7THY0_9STRA (Elongation factor G, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7THY0_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.450e-49 Identity = 85/111 (76.58%), Postives = 101/111 (90.99%), Query Frame = 1
Query: 1 QGVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQIESTVPLANMFQ 333
+GVESV+ NGVLAGFPV G+KA LVDGA+HDVDSSV+AFEIAGRAAAREGLRKAG++LMEP+M+V+V+TPEEYMGDVIGDIN+RRGQ+ EL +R K +E+ VPLANMFQ
Sbjct: 626 KGVESVMGNGVLAGFPVQGLKATLVDGAFHDVDSSVLAFEIAGRAAAREGLRKAGSKLMEPMMKVEVVTPEEYMGDVIGDINSRRGQIAELGERGNAKTVEAMVPLANMFQ 736
BLAST of mRNA_F-distichus_contig99381.19381.1 vs. uniprot
Match: A0A7S0BD03_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BD03_9RHOD) HSP 1 Score: 162 bits (411), Expect = 3.660e-49 Identity = 78/111 (70.27%), Postives = 97/111 (87.39%), Query Frame = 1
Query: 1 QGVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQIESTVPLANMFQ 333
+G+ES ++NGV+AGFP+LG++A LVDGAYHDVDSSV+AFEIA RAA +EGLRKAGARLMEP+M+V+V+TPEEYMGDV+GD+N+RRGQV L DR K I + VPL+ MFQ
Sbjct: 10 KGIESEMTNGVVAGFPLLGLRAKLVDGAYHDVDSSVLAFEIAARAAFKEGLRKAGARLMEPIMKVEVVTPEEYMGDVLGDLNSRRGQVQSLGDRGVAKNIVALVPLSEMFQ 120
BLAST of mRNA_F-distichus_contig99381.19381.1 vs. uniprot
Match: A0A7S2U7T6_9STRA (Elongation factor G, mitochondrial n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7T6_9STRA) HSP 1 Score: 174 bits (442), Expect = 5.080e-49 Identity = 86/111 (77.48%), Postives = 99/111 (89.19%), Query Frame = 1
Query: 1 QGVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQIESTVPLANMFQ 333
+G+ESVL +GV+AG+PVLGMKA LVDGAYHDVDSSVMAFEIAGRAA REGLRKA ARLMEP+M+VD+ TPEEYMGDV+GDIN+RRGQV EL +R +K I + VPLANMFQ
Sbjct: 542 KGIESVLGSGVVAGYPVLGMKATLVDGAYHDVDSSVMAFEIAGRAATREGLRKAKARLMEPLMKVDITTPEEYMGDVLGDINSRRGQVDELGERGNIKTISALVPLANMFQ 652
BLAST of mRNA_F-distichus_contig99381.19381.1 vs. uniprot
Match: A0A7S3AYB0_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AYB0_9EUKA) HSP 1 Score: 166 bits (419), Expect = 6.510e-49 Identity = 79/111 (71.17%), Postives = 99/111 (89.19%), Query Frame = 1
Query: 1 QGVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGLRKAGARLMEPVMQVDVITPEEYMGDVIGDINARRGQVVELTDRNGLKQIESTVPLANMFQ 333
+G+ES++ +G+LAGFPV+G KA L+DGAYHDVDSSVMAFEIAGR AAR+GLR+AGA+LMEP+M+V+VITPEE+MGDVIGDIN+RRG V EL +R +K + + VPLANMFQ
Sbjct: 125 KGLESIMGSGILAGFPVIGCKATLMDGAYHDVDSSVMAFEIAGRGAARKGLREAGAQLMEPMMKVEVITPEEHMGDVIGDINSRRGMVGELGERGNMKVVRAQVPLANMFQ 235 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig99381.19381.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig99381.19381.1 >prot_F-distichus_contig99381.19381.1 ID=prot_F-distichus_contig99381.19381.1|Name=mRNA_F-distichus_contig99381.19381.1|organism=Fucus distichus monoicous|type=polypeptide|length=111bp QGVESVLSNGVLAGFPVLGMKAILVDGAYHDVDSSVMAFEIAGRAAAREGback to top mRNA from alignment at F-distichus_contig99381:19..942+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig99381.19381.1 ID=mRNA_F-distichus_contig99381.19381.1|Name=mRNA_F-distichus_contig99381.19381.1|organism=Fucus distichus monoicous|type=mRNA|length=924bp|location=Sequence derived from alignment at F-distichus_contig99381:19..942+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig99381:19..942+ >mRNA_F-distichus_contig99381.19381.1 ID=mRNA_F-distichus_contig99381.19381.1|Name=mRNA_F-distichus_contig99381.19381.1|organism=Fucus distichus monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at F-distichus_contig99381:19..942+ (Fucus distichus monoicous)back to top |