mRNA_F-distichus_contig99335.19376.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig99335.19376.1 vs. uniprot
Match: A0A6H5KNP1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP1_9PHAE) HSP 1 Score: 108 bits (271), Expect = 8.660e-28 Identity = 54/86 (62.79%), Postives = 65/86 (75.58%), Query Frame = 1
Query: 1 VDAGHLKGEWKGVVLVATAKDTNNTLVLVALAICDKENASNFSFLLTEMKKNPHMTALLSSTGTTIYSDEHPGISAALKTHASRCI 258
VD GH+KG WKG+VLVA KDTNN LVLVA ICDKEN++N+ FL +EMKKN H+ A L S TTIYSDE+ GI +A++ AS I
Sbjct: 95 VDGGHMKGTWKGMVLVAAGKDTNNNLVLVAFVICDKENSTNYEFLFSEMKKNVHLKAPLESPLTTIYSDENNGIKSAIEIEASDII 180
BLAST of mRNA_F-distichus_contig99335.19376.1 vs. uniprot
Match: A0A6H5JC04_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC04_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 1.810e-15 Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 1 VDAGHLKGEWKGVVLVATAKDTNNTLVLVALAICDKENASNFSFLLTEMKKNPHMTALLSSTGTTIYSDEHPGISAALK 237
+DAGHLKG WKGV+ V D+NN ++ V+ + DKENA+N+ FLL + +N HM LLSS T + D H G AAL+
Sbjct: 250 MDAGHLKGSWKGVMYVLCMHDSNNKIIHVSTVLADKENATNYKFLLQQTCRNEHMHRLLSSGEVTFFIDGHKGSPAALR 328
BLAST of mRNA_F-distichus_contig99335.19376.1 vs. uniprot
Match: D7G6Q0_ECTSI (MULE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q0_ECTSI) HSP 1 Score: 79.0 bits (193), Expect = 3.530e-15 Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 1 VDAGHLKGEWKGVVLVATAKDTNNTLVLVALAICDKENASNFSFLLTEMKKNPHMTALLSSTGTTIYSDEHPGISAALK 237
+DAGHLKG W GV+ V D+NN ++ V+ + DKENA+N+ FLL + +N HM LLSS T Y D H G AAL+
Sbjct: 164 MDAGHLKGSWHGVMYVLCMHDSNNKIIHVSTVLADKENATNYEFLLQQTCRNEHMQRLLSSGEVTFYIDGHKGSPAALR 242
BLAST of mRNA_F-distichus_contig99335.19376.1 vs. uniprot
Match: A0A6H5KQH4_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH4_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 4.470e-15 Identity = 36/79 (45.57%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 1 VDAGHLKGEWKGVVLVATAKDTNNTLVLVALAICDKENASNFSFLLTEMKKNPHMTALLSSTGTTIYSDEHPGISAALK 237
+DAGHL+ WKGV+ ++NN ++ V+ + DKENA+N+ FLL + +N HM LLSS T Y D H G AAL+
Sbjct: 4 MDAGHLRDSWKGVMYALCMHNSNNKIIHVSTVLADKENATNYKFLLQQTCRNEHMQRLLSSGEVTFYIDGHKGSPAALR 82
BLAST of mRNA_F-distichus_contig99335.19376.1 vs. uniprot
Match: A0A6H5K7Q3_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Q3_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 6.890e-15 Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 1 VDAGHLKGEWKGVVLVATAKDTNNTLVLVALAICDKENASNFSFLLTEMKKNPHMTALLSSTGTTIYSDEHPGISAALK 237
+DAGHLKG WKGV+ V D+NN ++ + I DKE+A+NF FLL + +N HM LLSS T + D H G AAL+
Sbjct: 28 MDAGHLKGSWKGVMYVLCMHDSNNKIIHFSTVIADKEHATNFKFLLQQTCRNEHMHRLLSSGEVTFFIDGHKGSPAALR 106
BLAST of mRNA_F-distichus_contig99335.19376.1 vs. uniprot
Match: A0A6H5L9F2_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9F2_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 1.220e-14 Identity = 39/79 (49.37%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 1 VDAGHLKGEWKGVVLVATAKDTNNTLVLVALAICDKENASNFSFLLTEMKKNPHMTALLSSTGTTIYSDEHPGISAALK 237
+DAGHLKG WKGV+ V D+NN ++ V + DKENA+N+ FLL + +N HM LLSS T D H G AAL+
Sbjct: 82 MDAGHLKGSWKGVMYVLCMHDSNNKIIHVTTVLADKENATNYKFLLQQTCRNEHMHRLLSSGEVTFVIDGHKGSPAALR 160
BLAST of mRNA_F-distichus_contig99335.19376.1 vs. uniprot
Match: A0A6H5KCE5_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCE5_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 3.770e-14 Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 1 VDAGHLKGEWKGVVLVATAKDTNNTLVLVALAICDKENASNFSFLLTEMKKNPHMTALLSSTGTTIYSDEHPGISAALK 237
+DAGHLKG WKGV+ D+NN ++ V+ + DKE A+N+ FLL + +N HM LLSS T + D H G AAL+
Sbjct: 4 MDAGHLKGSWKGVMYFLCMHDSNNKIIHVSTVLADKEIATNYRFLLQQTFRNEHMHRLLSSGEVTFFIDGHKGSPAALR 82
BLAST of mRNA_F-distichus_contig99335.19376.1 vs. uniprot
Match: A0A6H5KDH4_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDH4_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 2.790e-13 Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 1
Query: 1 VDAGHLKGEWKGVVL-VATAKDTNNTLVLVALAICDKENASNFSFLLTEMKKNPHMTALLSSTGTTIYSDEHPGISAALK 237
+DAGHLKG WKGV+ V ++ N ++ V + DKENA+N+ FLL + +N HM LLSS T + D H G AAL+
Sbjct: 4 MDAGHLKGSWKGVMYDVLCMHESKNKIIHVNTVLADKENATNYKFLLQQTCRNEHMHRLLSSGEVTFFIDGHKGSPAALR 83
BLAST of mRNA_F-distichus_contig99335.19376.1 vs. uniprot
Match: UPI000DEC585F (uncharacterized protein LOC112756706 n=1 Tax=Arachis hypogaea TaxID=3818 RepID=UPI000DEC585F) HSP 1 Score: 54.7 bits (130), Expect = 5.750e-7 Identity = 31/79 (39.24%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 1 VDAGHLKGEWKGVVLVATAKDTNNTLVLVALAICDKENASNFSFLLTEMKKNPHMTALLSSTGTTIYSDEHPGISAALK 237
+D HL G++ G +LVA A+D N++++ VA A+ + ENA ++SF L+ ++ H+T G + SD H GI AAL+
Sbjct: 96 IDGTHLYGKYGGTLLVAIAQDGNSSILPVAFALVEGENAESWSFFLSHLRH--HVTP---QPGLLVISDRHNGIKAALE 169
BLAST of mRNA_F-distichus_contig99335.19376.1 vs. uniprot
Match: A0A6H5K9J4_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J4_9PHAE) HSP 1 Score: 55.1 bits (131), Expect = 8.690e-7 Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 61 DTNNTLVLVALAICDKENASNFSFLLTEMKKNPHMTALLSSTGTTIYSDEHPGISAALK 237
D+NN ++ V+ + DKENA+N+ FLL ++ +N HM LLSS T + D H G AAL+
Sbjct: 8 DSNNKIIHVSTVLADKENATNYKFLLQQICRNEHMHRLLSSGEVTFFIDGHKGSPAALR 66 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig99335.19376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig99335.19376.1 >prot_F-distichus_contig99335.19376.1 ID=prot_F-distichus_contig99335.19376.1|Name=mRNA_F-distichus_contig99335.19376.1|organism=Fucus distichus monoicous|type=polypeptide|length=90bp VDAGHLKGEWKGVVLVATAKDTNNTLVLVALAICDKENASNFSFLLTEMKback to top mRNA from alignment at F-distichus_contig99335:1309..1578+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig99335.19376.1 ID=mRNA_F-distichus_contig99335.19376.1|Name=mRNA_F-distichus_contig99335.19376.1|organism=Fucus distichus monoicous|type=mRNA|length=270bp|location=Sequence derived from alignment at F-distichus_contig99335:1309..1578+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig99335:1309..1578+ >mRNA_F-distichus_contig99335.19376.1 ID=mRNA_F-distichus_contig99335.19376.1|Name=mRNA_F-distichus_contig99335.19376.1|organism=Fucus distichus monoicous|type=CDS|length=540bp|location=Sequence derived from alignment at F-distichus_contig99335:1309..1578+ (Fucus distichus monoicous)back to top |