mRNA_F-distichus_contig99309.19373.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig99309.19373.1
Unique NamemRNA_F-distichus_contig99309.19373.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig99309.19373.1 vs. uniprot
Match: D8LQQ0_ECTSI (GPI ethanolamine phosphate transferase 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQQ0_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 1.320e-29
Identity = 76/158 (48.10%), Postives = 93/158 (58.86%), Query Frame = 1
Query:    1 VFSSVDEDTVVFVLGDHGMTEDGNHGGATAEETGAALFIWSRSAERLFGSGARD-----GNAGRRRGIGVFGGEGS----------------ESVPGEGSGDADVGRT-------STATPSSGRQVAQIDLVPTVALLMGVPVPFGNLGGIMPVVFGG 390
            VF  VD++TVVFVLGDHGMTEDGNHGGAT EETGAAL +WSRS ERL G G ++     G    RR                          +  P +G GD   G         S   P++ R+VAQIDLVPT++LL+G P+PFG+LGG++P VFGG
Sbjct:  298 VFEGVDDETVVFVLGDHGMTEDGNHGGATPEETGAALLVWSRSGERLLGPGFKNRRNSGGTPSSRRXXXXXXXXXXXXXXXXXXXXXXXXRRQGGPSQGHGDVAAGEEEGSEEDHSGPVPAA-RRVAQIDLVPTISLLLGTPIPFGSLGGVIPEVFGG 454          
BLAST of mRNA_F-distichus_contig99309.19373.1 vs. uniprot
Match: A0A067CQW9_SAPPC (GPI ethanolamine phosphate transferase 3 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQW9_SAPPC)

HSP 1 Score: 92.8 bits (229), Expect = 2.220e-19
Identity = 57/128 (44.53%), Postives = 80/128 (62.50%), Query Frame = 1
Query:    1 VFSSVDEDTVVFVLGDHGMTEDGNHGGATAEETGAALFIWSRSAERLFGSGARDGNAGRRRGIGVFGGEGSESVPGEGSGDADVGRTSTATPSSGRQVAQIDLVPTVALLMGVPVPFGNLGGIMPVVF 384
            + ++V++DT+V VLGDHGM+EDGNHGGAT +ETGAALF++S++        A DG       + +F              +  VGR S         VAQ+DLVPT++LL+G+P+PFGNLG ++P VF
Sbjct:  258 LLATVEDDTLVVVLGDHGMSEDGNHGGATDDETGAALFLYSKTPLH-HAIAAPDGGT-----LSLF--------------NHVVGRRSNEYT-----VAQVDLVPTLSLLLGLPIPFGNLGAVIPHVF 360          
BLAST of mRNA_F-distichus_contig99309.19373.1 vs. uniprot
Match: A0A4D9CYS9_9STRA (GPI ethanolamine phosphate transferase 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYS9_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.470e-18
Identity = 56/128 (43.75%), Postives = 78/128 (60.94%), Query Frame = 1
Query:   22 DTVVFVLGDHGMTEDGNHGGATAEETGAALFIWSRSAERLFGSGARDGNAGR-------RRGIGVFGGEGSESVPGEGSGDADVGRTSTATPSSGRQVAQIDLVPTVALLMGVPVPFGNLGGIMPVVF 384
            +T++ V+GDHGMT+DGNHGGA+ +ET AALF++S   E + G+       GR       ++G GV+    S     E  G         + P   R+VAQ+DLVPT+ALL+GVPVP+ NLG +MP +F
Sbjct:  333 ETLIVVMGDHGMTDDGNHGGASQDETEAALFLYSPGKELVAGAEDEGREGGREERGETGKKGRGVYVWRDSAGKEEERGGLVATRLDGGSVP---RRVAQVDLVPTLALLLGVPVPYPNLGSVMPELF 457          
BLAST of mRNA_F-distichus_contig99309.19373.1 vs. uniprot
Match: A0A1V9ZUS7_9STRA (GPI ethanolamine phosphate transferase 3 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZUS7_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.660e-18
Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = 1
Query:    1 VFSSVDEDTVVFVLGDHGMTEDGNHGGATAEETGAALFIWSRSAERLFGSGARDGNAGRRRGIGVFGGEGSESVPGEGSGDADVGRTSTATPSSGRQ-----VAQIDLVPTVALLMGVPVPFGNLGGIMPVVF 384
            +F++V +DT+V VLGDHGM+EDGNHGGAT +ETGAALF++S++                           + + PG        G  S      GR+     VAQ+DLVPT+ALL+G+P+PFGNLG ++P +F
Sbjct:  258 LFTAVADDTLVVVLGDHGMSEDGNHGGATDDETGAALFLYSKAPLHH-----------------------AIAAPG--------GPMSLYNHVLGRRANDLTVAQVDLVPTLALLLGLPIPFGNLGAVIPHLF 359          
BLAST of mRNA_F-distichus_contig99309.19373.1 vs. uniprot
Match: D0MTA2_PHYIT (GPI ethanolamine phosphate transferase 3 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MTA2_PHYIT)

HSP 1 Score: 89.7 bits (221), Expect = 2.690e-18
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 1
Query:   19 EDTVVFVLGDHGMTEDGNHGGATAEETGAALFIWSRSAERLFGSGARDGNAGRRRGIGVFGGEGSESVPGEGSGDADVGRTSTATPSSGRQVAQIDLVPTVALLMGVPVPFGNLGGIMPVVF 384
            +D ++ VLGDHGM+ DGNHGGA+ EETGAALF++S++A  L  +G  + N   R                      ++ + +     S R+V Q+DLVPT+ALL G+P+PFGNLG I+P +F
Sbjct:  277 DDVLLAVLGDHGMSADGNHGGASDEETGAALFLYSKAA--LVATGRENDNEDAR----------------------ELKKYAERILDSSREVPQVDLVPTLALLSGLPIPFGNLGSIIPSLF 374          
BLAST of mRNA_F-distichus_contig99309.19373.1 vs. uniprot
Match: A0A3M6VM76_9STRA (GPI ethanolamine phosphate transferase 3 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VM76_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.700e-18
Identity = 51/122 (41.80%), Postives = 71/122 (58.20%), Query Frame = 1
Query:   19 EDTVVFVLGDHGMTEDGNHGGATAEETGAALFIWSRSAERLFGSGARDGNAGRRRGIGVFGGEGSESVPGEGSGDADVGRTSTATPSSGRQVAQIDLVPTVALLMGVPVPFGNLGGIMPVVF 384
            ED ++ VLGDHGM+ DGNHGGA+ EETGAALF++S+++    G  +   NA   R                        + +     S R+V Q+DLVPT+ALL G+P+PFGNLG ++P +F
Sbjct:  277 EDVLLAVLGDHGMSADGNHGGASDEETGAALFLYSKASLLATGGDSDGENASELR------------------------KYAEKLLDSSREVPQVDLVPTLALLSGLPIPFGNLGSVIPSLF 374          
BLAST of mRNA_F-distichus_contig99309.19373.1 vs. uniprot
Match: G4ZDA1_PHYSP (GPI ethanolamine phosphate transferase 3 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZDA1_PHYSP)

HSP 1 Score: 89.4 bits (220), Expect = 3.680e-18
Identity = 50/122 (40.98%), Postives = 71/122 (58.20%), Query Frame = 1
Query:   19 EDTVVFVLGDHGMTEDGNHGGATAEETGAALFIWSRSAERLFGSGARDGNAGRRRGIGVFGGEGSESVPGEGSGDADVGRTSTATPSSGRQVAQIDLVPTVALLMGVPVPFGNLGGIMPVVF 384
            ED ++ VLGDHGM+ DGNHGGA+ EETGAALF++S+++    G G  D                            ++ + +     S R+V Q+DLVPT+ALL G+P+PFGNLG ++P +F
Sbjct:  277 EDVLLAVLGDHGMSADGNHGGASDEETGAALFLYSKASLVATGGGTDD----------------------------ELQKYAERILDSSREVPQVDLVPTLALLSGLPIPFGNLGSVIPSLF 370          
BLAST of mRNA_F-distichus_contig99309.19373.1 vs. uniprot
Match: A0A6A3MZP5_9STRA (GPI ethanolamine phosphate transferase 3 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MZP5_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 4.690e-18
Identity = 50/122 (40.98%), Postives = 71/122 (58.20%), Query Frame = 1
Query:   19 EDTVVFVLGDHGMTEDGNHGGATAEETGAALFIWSRSAERLFGSGARDGNAGRRRGIGVFGGEGSESVPGEGSGDADVGRTSTATPSSGRQVAQIDLVPTVALLMGVPVPFGNLGGIMPVVF 384
            ED ++ VLGDHGM+ DGNHGGA+ +ETGAALF++S+++    G GA D                            ++   +     S R+V Q+DLVPT+ALL G+P+PFGNLG ++P +F
Sbjct:  277 EDVLLAVLGDHGMSADGNHGGASDDETGAALFLYSKASLVATGGGADD----------------------------ELREYAERIIDSSREVPQVDLVPTLALLSGLPIPFGNLGSVIPSLF 370          
BLAST of mRNA_F-distichus_contig99309.19373.1 vs. uniprot
Match: L8GJJ5_ACACA (GPI ethanolamine phosphate transferase 3 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GJJ5_ACACA)

HSP 1 Score: 89.0 bits (219), Expect = 5.100e-18
Identity = 58/150 (38.67%), Postives = 84/150 (56.00%), Query Frame = 1
Query:    1 VFSSVDEDTVVFVLGDHGMTEDGNHGGATAEETGAALFIWSRSA------ERLFGSGARDGNAGRRRGIGVFGGEGSESVPGEGSGDADVGRTSTATPSSG----------------RQVAQIDLVPTVALLMGVPVPFGNLGGIMPVVF 384
            +  ++++DT++FV+GDHGMT DGNHGG T  E  AALF+++ S       +   G   +D          VF G    S  GE   DA +   +T  P++                 RQV+QID+VPT+ALL+G+P+PFGNLGG++P +F
Sbjct:  233 IVEAMEDDTILFVMGDHGMTADGNHGGHTESEVTAALFVYTPSTTFNRWDQLHLGEDIKD----------VFTG----SELGEELKDALLRERATGAPAAAKQPARPEGVVLTKDHFRQVSQIDVVPTIALLLGLPIPFGNLGGVIPELF 368          
BLAST of mRNA_F-distichus_contig99309.19373.1 vs. uniprot
Match: A0A662X9S6_9STRA (GPI ethanolamine phosphate transferase 3 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9S6_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 6.860e-18
Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 1
Query:   19 EDTVVFVLGDHGMTEDGNHGGATAEETGAALFIWSRSAERLFGSGARDGNAGRRRGIGVFGGEGSESVPGEGSGDADVGRTSTATPSSGRQVAQIDLVPTVALLMGVPVPFGNLGGIMPVVF 384
            +DT++ VLGDHGM+ DGNHGGA+ EETGAALF++S++   + GSG  D    R                       ++ + +    +   +V Q+DLVPT+ALL G+P+PF NLG ++P +F
Sbjct:  276 DDTLLAVLGDHGMSADGNHGGASDEETGAALFLYSKTPLVVMGSGEEDDKEMR-----------------------ELRKYAGKIAAGAHEVPQVDLVPTLALLSGLPIPFANLGSVIPSLF 374          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig99309.19373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQQ0_ECTSI1.320e-2948.10GPI ethanolamine phosphate transferase 3 n=2 Tax=E... [more]
A0A067CQW9_SAPPC2.220e-1944.53GPI ethanolamine phosphate transferase 3 n=2 Tax=S... [more]
A0A4D9CYS9_9STRA1.470e-1843.75GPI ethanolamine phosphate transferase 3 n=2 Tax=M... [more]
A0A1V9ZUS7_9STRA2.660e-1842.11GPI ethanolamine phosphate transferase 3 n=1 Tax=A... [more]
D0MTA2_PHYIT2.690e-1842.62GPI ethanolamine phosphate transferase 3 n=2 Tax=P... [more]
A0A3M6VM76_9STRA2.700e-1841.80GPI ethanolamine phosphate transferase 3 n=2 Tax=P... [more]
G4ZDA1_PHYSP3.680e-1840.98GPI ethanolamine phosphate transferase 3 n=1 Tax=P... [more]
A0A6A3MZP5_9STRA4.690e-1840.98GPI ethanolamine phosphate transferase 3 n=3 Tax=P... [more]
L8GJJ5_ACACA5.100e-1838.67GPI ethanolamine phosphate transferase 3 n=1 Tax=A... [more]
A0A662X9S6_9STRA6.860e-1840.16GPI ethanolamine phosphate transferase 3 n=2 Tax=N... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig99309contigF-distichus_contig99309:959..1438 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score123.6
Seed ortholog evalue6.6e-26
Seed eggNOG ortholog2880.D8LQQ0
Preferred namePIGO
KEGG rclassRC00017
KEGG koko:K05288
KEGG ReactionR05923,R08107
KEGG Pathwayko00563,ko01100,map00563,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016740,GO:0016772,GO:0016780,GO:0019538,GO:0019637,GO:0031224,GO:0031984,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0051377,GO:0071704,GO:0090407,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509
EggNOG free text desc.mannose-ethanolamine phosphotransferase activity
EggNOG OGsCOG1524@1,KOG2126@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons2
Model size390
Cds size390
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931174.8079631-CDS-F-distichus_contig99309:958..11211622931174.8079631-CDS-F-distichus_contig99309:958..1121Fucus distichus monoicousCDSF-distichus_contig99309 959..1121 +
1690886190.805449-CDS-F-distichus_contig99309:958..11211690886190.805449-CDS-F-distichus_contig99309:958..1121Fucus distichus monoicousCDSF-distichus_contig99309 959..1121 +
1622931174.823624-CDS-F-distichus_contig99309:1211..14381622931174.823624-CDS-F-distichus_contig99309:1211..1438Fucus distichus monoicousCDSF-distichus_contig99309 1212..1438 +
1690886190.820255-CDS-F-distichus_contig99309:1211..14381690886190.820255-CDS-F-distichus_contig99309:1211..1438Fucus distichus monoicousCDSF-distichus_contig99309 1212..1438 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig99309.19373.1prot_F-distichus_contig99309.19373.1Fucus distichus monoicouspolypeptideF-distichus_contig99309 959..1438 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig99309.19373.1

>prot_F-distichus_contig99309.19373.1 ID=prot_F-distichus_contig99309.19373.1|Name=mRNA_F-distichus_contig99309.19373.1|organism=Fucus distichus monoicous|type=polypeptide|length=130bp
VFSSVDEDTVVFVLGDHGMTEDGNHGGATAEETGAALFIWSRSAERLFGS
GARDGNAGRRRGIGVFGGEGSESVPGEGSGDADVGRTSTATPSSGRQVAQ
IDLVPTVALLMGVPVPFGNLGGIMPVVFGG
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mRNA from alignment at F-distichus_contig99309:959..1438+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig99309.19373.1 ID=mRNA_F-distichus_contig99309.19373.1|Name=mRNA_F-distichus_contig99309.19373.1|organism=Fucus distichus monoicous|type=mRNA|length=480bp|location=Sequence derived from alignment at F-distichus_contig99309:959..1438+ (Fucus distichus monoicous)
GTGTTCAGCAGCGTCGACGAAGACACGGTGGTGTTCGTGCTGGGCGACCA CGGCATGACGGAGGACGGCAACCACGGCGGCGCCACGGCCGAGGAGACCG GCGCCGCCCTCTTCATCTGGAGCCGTTCCGCGGAACGGCTTTTCGGGAGC GGGGCTCGGGACGGTGCGAGTCTCTTCCCCCCCCATGCCCACCTCCACCA TGGCCATGGCCATGATGAGGATGGCGAGGAGCGTATTACCGGGGGTGGCG GAGGCAACGCCGGGAGAAGAAGGGGGATCGGGGTTTTCGGTGGGGAAGGT AGTGAGAGTGTGCCTGGGGAGGGGTCGGGGGACGCGGACGTGGGGCGAAC CAGCACCGCGACACCGTCGTCCGGGCGGCAGGTGGCGCAGATTGACCTCG TTCCGACCGTCGCGCTCCTGATGGGCGTGCCAGTCCCGTTCGGGAACCTG GGGGGAATTATGCCGGTGGTTTTTGGGGGC
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Coding sequence (CDS) from alignment at F-distichus_contig99309:959..1438+

>mRNA_F-distichus_contig99309.19373.1 ID=mRNA_F-distichus_contig99309.19373.1|Name=mRNA_F-distichus_contig99309.19373.1|organism=Fucus distichus monoicous|type=CDS|length=780bp|location=Sequence derived from alignment at F-distichus_contig99309:959..1438+ (Fucus distichus monoicous)
GTGTTCAGCAGCGTCGACGAAGACACGGTGGTGTTCGTGCTGGGCGACCA
CGGCATGACGGAGGACGGCAACCACGGCGGCGCCACGGCCGAGGAGACCG
GCGCCGCCCTCTTCATCTGGAGCCGTTCCGCGGAACGGCTTTTCGGGAGC
GGGGCTCGGGACGGTGTTCAGCAGCGTCGACGAAGACACGGTGGTGTTCG
TGCTGGGCGACCACGGCATGACGGAGGACGGCAACCACGGCGGCGCCACG
GCCGAGGAGACCGGCGCCGCCCTCTTCATCTGGAGCCGTTCCGCGGAACG
GCTTTTCGGGAGCGGGGCTCGGGACGGCAACGCCGGGAGAAGAAGGGGGA
TCGGGGTTTTCGGTGGGGAAGGTAGTGAGAGTGTGCCTGGGGAGGGGTCG
GGGGACGCGGACGTGGGGCGAACCAGCACCGCGACACCGTCGTCCGGGCG
GCAGGTGGCGCAGATTGACCTCGTTCCGACCGTCGCGCTCCTGATGGGCG
TGCCAGTCCCGTTCGGGAACCTGGGGGGAATTATGCCGGTGGTTTTTGGG
GGCGCAACGCCGGGAGAAGAAGGGGGATCGGGGTTTTCGGTGGGGAAGGT
AGTGAGAGTGTGCCTGGGGAGGGGTCGGGGGACGCGGACGTGGGGCGAAC
CAGCACCGCGACACCGTCGTCCGGGCGGCAGGTGGCGCAGATTGACCTCG
TTCCGACCGTCGCGCTCCTGATGGGCGTGCCAGTCCCGTTCGGGAACCTG
GGGGGAATTATGCCGGTGGTTTTTGGGGGC
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