mRNA_F-distichus_contig9924.19368.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig9924.19368.1
Unique NamemRNA_F-distichus_contig9924.19368.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig9924.19368.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.380e-41
Identity = 101/287 (35.19%), Postives = 155/287 (54.01%), Query Frame = 1
Query:    7 VVARSVLWWCASFGVPKVLTSDGGTHFTGKVMQTVSSRLGVVHHFGVTNVSWSHGTVERMNHEVVKTFRAVLSERRRPSSEWPLALGAMQWAPKSAYRKRMGTTPFQMVTGRPPATAMSVLAGEDGDASTVEELDVGRGCLPVF-----------EVGDYVLLARVWE--PGRVPELVQIWTGPCRVVPEESEHVRVGEDIVTRETKEVHVVRMSPYADSSLVVGAEVCILFEMTKHQDELEIADVISVCKDPARVGEYRVQIAWVGLEDKEPTWEPMSTVYADAPK 828
            + A+ +L WC   GVP+V  SD  +HF   +M  + + LGV  +F V N  WS+GT ERM  EVV+T +A++ E R  + +W   + A+QWA  +A+R+R G+TP+ ++ GR P TA+S LA   G    V+ LD     L V            EV D V  +R       RV  L     G   +V  E  HV   ++IV+ E ++VHV R+  YAD++L + AE+  +F+    Q E E+A ++ +       G + V++ WVG + +E TWE +S ++  AP+
Sbjct: 1416 LTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWKVDVLDEKSLRLKVQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFVVGDYVIVAAERLHVYGVQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMSVAEDGPG-FDVEVEWVGFDKEENTWEELSKMWDAAPQ 1701          
BLAST of mRNA_F-distichus_contig9924.19368.1 vs. uniprot
Match: A0A2P4XSG7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSG7_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.520e-36
Identity = 94/280 (33.57%), Postives = 140/280 (50.00%), Query Frame = 1
Query:   22 VLWWCASFGVPKVLTSDGGTHFTGKVMQTVSSRLGVVHHFGVTNVSWSHGTVERMNHEVVKTFRAVLSERRRPSSEWPLALGAMQW----APKSAYRKRMGTTPFQMVTGRPPATAMSVLAGEDG-DASTVEELDVGRG-------CLPVFEVGDYVLLARVWEPGRVPELVQIWTGPCRVVPEESEHVRVGEDIVTRETKEVHVVRMSPYADSSLVVGAEVCILFEMTKHQDELEIADVISVCKDPARVGEYRVQIAWVGLEDKEPTWEPMSTVYADAP 825
            ++ W ASFGV +   SD GTHF  KV++ +   LG  HHF      W++GTVE +N EV++  RA+LSE R  S EWP  +  +Q     +P SA     G  P   +TG         LA  D    +T++E+   +         +  F+VGD+VL A VW+  R    V+ W GP +V    S  +   E+++T E +EVH  R+  YADSSL V  +   L     H  E  + D +   +  A+   + +++ W GL + E +WEP + +  D P
Sbjct:  176 LMTWFASFGVVRWWVSDQGTHFKNKVIEGLQHALGAHHHFTTARCPWANGTVEVVNREVLRCCRALLSEWRLQSGEWPRVIKIVQMVLNHSPCSAID---GVAPVTAMTGLKAMNPTDPLAVPDPIQVATLDEIQRRKHHNGKKGTTMAQFDVGDFVLYADVWQHARAKLRVK-WCGPAQVTAATSNWIFEIENLITGERREVHASRLKFYADSSLEVTED---LLRHVAHNSEGHVVDSLLAARYNAQEKRHELKVHWRGLAEAEDSWEPAAVLLQDVP 448          
BLAST of mRNA_F-distichus_contig9924.19368.1 vs. uniprot
Match: A0A6G0RPX5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RPX5_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.030e-32
Identity = 93/313 (29.71%), Postives = 147/313 (46.96%), Query Frame = 1
Query:    4 EVVARSVLWWCASFGVPKVLTSDGGTHFTGKVMQTVSSRLGVVHHFGVTNVSWSHGTVERMNHEVVKTFRAVLSERRRPSSEW----PLALGAMQWAPKSAYRKRMGTTPFQMVTGRPPATAMSVLAGEDGDASTVEELDVGR-----------------------------------GCLPVFEVGDYVLLARVWEPGRVPELVQIWTGPCRVVPEESEHVRVGEDIVTRETKEVHVVRMSPYADSSLVVGAEVCILFEMTKHQDELEIADVISVCKDPARVGEYRVQIAWVGLEDKEPTWEPMSTVYADAP 825
            EVV  S+L W   FG+P+   SD G+HF  +VM ++  RL     F      W +GTVER+N ++++  RA+L E +  +  W    PL    +  +P ++        P ++  G P  +A+  +A      + +  +D  R                                   G +  F VGD+VL +RV    +  +L+  W GP RVV E  +H  + E ++T++  EVH  R+  Y DSSL V AE  +   + K    L +  +++   +P    E+ VQ+AW+GLED E +WEP+  +YAD P
Sbjct:   45 EVVVASILDWFKRFGLPESWESDNGSHFKAEVMASLCERLKANQSFVPAYTPWINGTVERINRDILQVLRAMLLEFQLDTGNWLYLLPLIQANLNHSPVASLGNH---APIEVFMGLPAPSALDTIAVPSDKGTRLVPVDPERVSAHVEKLRRSLHAMRKEATTQKEKKRLYEMARAKGGICNFAVGDFVLWSRVDSRLQGSKLLVRWVGPFRVV-EARQHSFIIEHLITKDKVEVHGSRLKFYCDSSLNVTAE--LKEHVAKQGIVLGVRAIVNHRNNPVS-NEWEVQVAWIGLEDVENSWEPLRRIYADVP 350          
BLAST of mRNA_F-distichus_contig9924.19368.1 vs. uniprot
Match: A0A6A4G1U2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G1U2_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.050e-31
Identity = 93/313 (29.71%), Postives = 148/313 (47.28%), Query Frame = 1
Query:    4 EVVARSVLWWCASFGVPKVLTSDGGTHFTGKVMQTVSSRLGVVHHFGVTNVSWSHGTVERMNHEVVKTFRAVLSERRRPSSEW----PLALGAMQWAPKSAYRKRMGTTPFQMVTGRPPATAMSVLAGEDGDASTVEELDVGR-----------------------------------GCLPVFEVGDYVLLARVWEPGRVPELVQIWTGPCRVVPEESEHVRVGEDIVTRETKEVHVVRMSPYADSSLVVGAEVCILFEMTKHQDELEIADVISVCKDPARVGEYRVQIAWVGLEDKEPTWEPMSTVYADAP 825
            EVV  S+L W   FG+P+   SD G+HF  +VM ++  RL     F      W +GTVER+N ++++  RA+L E +  +  W    PL    +  +P ++        P ++ TG P  +A+  +A      + +  +D  R                                   G +  F VGD+VL +RV    +  +L+  W GP RVV E  +H  + + ++T++  EVH  R+  Y DSSL V AE  +   + K    L +  +++   +P    E+ VQ+AW+GLED E +WEP+  +YAD P
Sbjct:  668 EVVVASILDWFKRFGLPESWESDNGSHFKAEVMASLCERLKANQSFVPVYTPWINGTVERINRDILQVLRAMLLEFQLDTRNWLYLLPLIQANLNHSPVASLGNH---APIEVFTGLPAPSALDTIAVPSDKGTRLVPVDPERVSAHVEKLRRSLHAMHKEATTQKEKKRLYEMARAKGGICNFAVGDFVLWSRVDSRLQGSKLLVRWVGPFRVV-EARQHSFIIDHLITKDKVEVHGSRLKFYCDSSLNVTAE--LKEHVAKQGIVLGVRAIVNHRNNPVS-NEWEVQVAWIGLEDVENSWEPLRRIYADVP 973          
BLAST of mRNA_F-distichus_contig9924.19368.1 vs. uniprot
Match: A0A6A3KPV3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3KPV3_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.280e-31
Identity = 93/313 (29.71%), Postives = 148/313 (47.28%), Query Frame = 1
Query:    4 EVVARSVLWWCASFGVPKVLTSDGGTHFTGKVMQTVSSRLGVVHHFGVTNVSWSHGTVERMNHEVVKTFRAVLSERRRPSSEW----PLALGAMQWAPKSAYRKRMGTTPFQMVTGRPPATAMSVLAGEDGDASTVEELDVGR-----------------------------------GCLPVFEVGDYVLLARVWEPGRVPELVQIWTGPCRVVPEESEHVRVGEDIVTRETKEVHVVRMSPYADSSLVVGAEVCILFEMTKHQDELEIADVISVCKDPARVGEYRVQIAWVGLEDKEPTWEPMSTVYADAP 825
            EVV  S+L W   FG+P+   SD G+HF  +VM ++  RL     F      W +GTVER+N ++++  RA+L E +  +  W    PL    +  +P ++        P ++ TG P  +A+  +A      + +  +D  R                                   G +  F VGD+VL +RV    +  +L+  W GP RVV E  +H  + + ++T++  EVH  R+  Y DSSL V AE  +   + K    L +  +++   +P    E+ VQ+AW+GLED E +WEP+  +YAD P
Sbjct: 1084 EVVVASILDWFKRFGLPESWESDNGSHFKAEVMASLCERLKANQSFVPVYTPWINGTVERINRDILQVLRAMLLEFQLDTRNWLYLLPLIQANLNHSPVASLGNH---APIEVFTGLPAPSALDTIAVPSDKGTRLVPVDPERVSAHVEKLRRSLHAMHKEATTQKEKKRLYEMARAKGGICNFAVGDFVLWSRVDSRLQGSKLLVRWVGPFRVV-EARQHSFIIDHLITKDKVEVHGSRLKFYCDSSLNVTAE--LKEHVAKQGIVLGVRAIVNHRNNPVS-NEWEVQVAWIGLEDVENSWEPLRRIYADVP 1389          
BLAST of mRNA_F-distichus_contig9924.19368.1 vs. uniprot
Match: A0A2P4WXA7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXA7_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.270e-27
Identity = 82/255 (32.16%), Postives = 123/255 (48.24%), Query Frame = 1
Query:   67 SDGGTHFTGKVMQTVSSRLGVVHHFGVTNVSWSHGTVERMNHEVVKTFRAVLSERRRPSSEWPLALGAMQWA-PKSAYRKRMGTTPFQMVTGRPPATAMSVLAGEDGDAST--VEELDVGRGC-LPVFEVGDYVLLARVWEPGRVPELVQIWTGPCRVVPEESEHVRVGEDIVTRETKEVHVVRMSPYADSSLVVGAEVCILFEMTKHQDELEIADVISVCKDPARVGEYRVQIAWVGLEDKEPTWEPMSTVYAD 819
            SD GTHF   V+Q +   LG  HHF      W++GTVE +  EV++  RA+LSE R   +EWP  +  +Q    +S      G  P + +TG      +  +    G ++          RG  +  F +GDYVL A VW   R  +L   W GP RVV   S  V   E+++TRET+EVH  R+  +ADS L +  +   L     H  E  + + I   +      ++++ + W GL + E +WEP+  +  D
Sbjct: 1201 SDQGTHFKNAVIQALQRALGAHHHFTTARCPWANGTVEVVMREVLRCCRALLSEWRLAEAEWPRVIKIVQLVLNQSPSASLEGVAPVRAMTGIAAMNPVDPIITPSGQSARNKARTKSSKRGAKMAQFAIGDYVLYADVWSH-RHSKLRVKWCGPARVVDTASNWVFTIENLLTRETREVHASRLKFFADSDLGITED---LLAHVAHNSEGHVVEEIREARYDNVGKQHQLLVKWRGLGEIENSWEPVQNLLED 1451          
BLAST of mRNA_F-distichus_contig9924.19368.1 vs. uniprot
Match: A0A6G0RX23_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RX23_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.900e-26
Identity = 92/312 (29.49%), Postives = 138/312 (44.23%), Query Frame = 1
Query:   16 RSVLWWCASFGVPKVLTSDGGTHFTGKVMQTVSSRLGVVHHFGVTNVSWSHGTVERMNHEVVKTFRAVLSERRRPSSEWPLALGAMQWAPKSAYRKRMG-TTPFQMVTGRPPATAM-SVLAGEDGDASTVEELD-------------------------------------VGRGC-LPVFEVGDYVLLARVWEPGRVP-ELVQIWTGPCRVVPEESEHVRVGEDIVTRETKEV-HVVRMSPYADSSLVVGAEVCILFEMTKHQDELEIADVISVCKDPARVGEYRVQIAWVGLEDKEPTWEPMSTVYADAP 825
            +S+L W   FGV     SD G HF  +VM+ +S  LG  HHF      W++GTVE +N EV+K+ +A+LSERR    +WP  L  +Q A  +    R+G  TP    T  P  + +  +L   D   STV  ++                                       RG  LP F  GD+VL A     GR   +L  +W GP R+V   +++    +D++     E+ H  R+  Y D++     E   L E   H    ++ + +  C+       + VQ+ W GL+D E +WEP  T+ +D P
Sbjct:  224 QSLLDWFKRFGVVHQWISDQGAHFKNQVMEKLSVALGANHHFTTAYTPWANGTVEVVNREVLKSVKALLSERRLQVQDWPRVLPVVQAALNTMPADRLGGVTPLTAFTALPGGSQLRGILHPRDPLVSTVTWVEDETIQHLASVRAALDGMHREMTNASEKRRRAARDRHAKKRGVTLPRFSEGDFVLAATA--TGRSGNKLALLWRGPKRIVKAVNDYTFEVQDLMAPFDIELRHASRLQLYRDAARGHAEE---LVEQAIHGQGGQLIEGLKACRLSPETHRWEVQVKWFGLDDIEQSWEPAETIRSDVP 530          
BLAST of mRNA_F-distichus_contig9924.19368.1 vs. uniprot
Match: A0A225VKM9_9STRA (RNA-directed DNA polymerase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VKM9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.760e-26
Identity = 90/310 (29.03%), Postives = 143/310 (46.13%), Query Frame = 1
Query:    4 EVVARSVLWWCASFGVPKVLTSDGGTHFTGKVMQTVSSRLGVVHHFGVTNVSWSHGTVERMNHEVVKTFRAVLSERRRPSSEW----PLALGAMQWAPKSAYRKRMGTTPFQMVTGRPPATAMSVLAGEDGDASTVEELDVGR--------------------------------GCLPVFEVGDYVLLARVWEPGRVPELVQIWTGPCRVVPEESEHVRVGEDIVTRETKEVHVVRMSPYADSSLVVGAEVCILFEMTKHQDELEIADVISVCKDPARVGEYRVQIAWVGLEDKEPTWEPMSTVYADAP 825
            EVV  ++L W   FG+P+   S  G++F  +VM+ +S RL     F        +GTVER+N ++++  RA+L E +  +  W    PL    +  AP ++         F   TG P  +A+  +A      + +  +D  R                                G +  F VGD+VL +RV    +  +L+  W GP RVV E  +H  + + ++T++  EVH  R+  Y DSSL V AE      + +H  +  I  V+ V        ++ VQ+AW+GLED E +WEP+ ++Y D P
Sbjct:  902 EVVVAAILDWFKHFGLPESWESANGSYFKAEVMEQLSKRLKANQSFVPVYTPCINGTVERINRDILQVLRAMLLEFQLDTRNWLYLLPLIQANLNHAPVASLGNXXXXXXF---TGLPAPSALDTIAVPSDKGTRLVPVDPERVSAHVEKYLHDMHKEAATQREKKRLYEMARAKGRICNFVVGDFVLWSRVDSRLQGSKLLVRWVGPFRVV-EARQHSFIVQHLITKDKVEVHGSRLKFYCDSSLNVTAE------LKEHVAKQGI--VLGVRASITGSTQWEVQVAWIGLEDVENSWEPLRSIYVDVP 1199          
BLAST of mRNA_F-distichus_contig9924.19368.1 vs. uniprot
Match: A0A6A3W606_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3W606_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.090e-25
Identity = 92/314 (29.30%), Postives = 137/314 (43.63%), Query Frame = 1
Query:   16 RSVLWWCASFGVPKVLTSDGGTHFTGKVMQTVSSRLGVVHHFGVTNVSWSHGTVERMNHEVVKTFRAVLSERRRPSSEWPLALGAMQWAPKSAYRKRMG-TTPFQMVTGRPPATAM-SVLAGEDGDASTVEELD-------------------------------------VGRGC-LPVFEVGDYVLLARVWEPGRVP-ELVQIWTGPCRVVPEESEHVRVGEDIVTRETKEV-HVVRMSPYADSSLVVGAEVCILFEMTKHQDELEIADVISVCKDPARVGEYRVQIAWVGLEDKEPTWEPMSTVYADAPKH 831
            +S+L W   FGV     SD G HF  +VM+ +S  LG  HHF      W++GTVE +N EV+K+ +A+LSERR    +WP  L  +Q A  +    R+G  TP    T  P  + +  +L   D   STV  ++                                       RG  LP F  GD+VL A     GR   +L  +W  P R+V   +++    +D++     E+ H  R+  Y D++     E   L E   H     + + +  C+       + VQ+ W GL+D E +WEP  T+ +D P H
Sbjct:  507 QSLLDWFKRFGVVHQWISDQGAHFKNQVMEKLSVALGANHHFTTAYTPWANGTVEVVNREVLKSVKALLSERRLQVQDWPRVLPVVQAALNTMPADRLGGVTPLTAFTALPGGSQLRGILHPRDPLVSTVTWVEDETIQHLASVRAALDGMHREMTSASEKRRRAAQDRHAKKRGVTLPRFSEGDFVLAATA--TGRSGNKLALLWRDPKRIVKAVNDYTFEVQDLMAPFDIELRHASRLQLYRDAARGHAEE---LVEQAIHGQGGHLIEGLKACRLSPETHRWEVQVKWFGLDDIEQSWEPAETIRSDVPVH 815          
BLAST of mRNA_F-distichus_contig9924.19368.1 vs. uniprot
Match: A0A2P4XGX1_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XGX1_9STRA)

HSP 1 Score: 110 bits (275), Expect = 8.240e-25
Identity = 75/220 (34.09%), Postives = 106/220 (48.18%), Query Frame = 1
Query:   31 WCASFGVPKVLTSDGGTHFTGKVMQTVSSRLGVVHHFGVTNVSWSHGTVERMNHEVVKTFRAVLSERRRPSSEWPLALGAMQWAPKSAYRKRMGTTPFQMVTGRPPATAMSVLAGEDG-------DASTVEELD----------VGRGCLPVFEVGDYVLLARVWEPGRVPELVQIWTGPCRVVPEESEHVRVGEDIVTRETKEVHVVRMSPYADSSLVV 639
            W A FGV +   SD GTHF  KV++ +   LG   HF     +W++GTVE +N EV++  RA+LSE R  S EWP  +   Q          +  +P   + G  P TAM+ L   D        D   V  LD          +    +  F++GD+VL A VW+  R    V+ W GP +V    S  +   E++++ E +EVH  R+  Y DSSL V
Sbjct:   87 WFAMFGVVRWWVSDQGTHFKNKVLEGLQHALGAHRHFTTARCTWTNGTVEVVNREVLRCCRALLSEWRLQSGEWPRVIKNFQMV--------LNHSPCSAIDGVAPVTAMTGLKVMDPTDPLAVPDPIQVATLDDFQRRKHHNGIKGTTMAQFDMGDFVLYADVWQYARAKLRVK-WCGPAQVTAAASNGIFEIENLISGERREVHAGRLKFYTDSSLEV 297          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9924.19368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE1.380e-4135.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P4XSG7_9STRA1.520e-3633.57Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6G0RPX5_9STRA2.030e-3229.71Uncharacterized protein n=4 Tax=Phytophthora fraga... [more]
A0A6A4G1U2_9STRA3.050e-3129.71Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A6A3KPV3_9STRA3.280e-3129.71Uncharacterized protein n=3 Tax=Phytophthora rubi ... [more]
A0A2P4WXA7_9STRA1.270e-2732.16Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6G0RX23_9STRA2.900e-2629.49Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A225VKM9_9STRA4.760e-2629.03RNA-directed DNA polymerase n=1 Tax=Phytophthora m... [more]
A0A6A3W606_9STRA1.090e-2529.30Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A2P4XGX1_9STRA8.240e-2534.09Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9924contigF-distichus_contig9924:8109..9056 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score129.4
Seed ortholog evalue2.6e-27
Seed eggNOG ortholog4792.ETI57041
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QEWS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size834
Cds size834
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931174.29704-CDS-F-distichus_contig9924:8108..85211622931174.29704-CDS-F-distichus_contig9924:8108..8521Fucus distichus monoicousCDSF-distichus_contig9924 8109..8521 +
1690886190.446775-CDS-F-distichus_contig9924:8108..85211690886190.446775-CDS-F-distichus_contig9924:8108..8521Fucus distichus monoicousCDSF-distichus_contig9924 8109..8521 +
1622931174.3166552-CDS-F-distichus_contig9924:8635..90561622931174.3166552-CDS-F-distichus_contig9924:8635..9056Fucus distichus monoicousCDSF-distichus_contig9924 8636..9056 +
1690886190.4590456-CDS-F-distichus_contig9924:8635..90561690886190.4590456-CDS-F-distichus_contig9924:8635..9056Fucus distichus monoicousCDSF-distichus_contig9924 8636..9056 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9924.19368.1prot_F-distichus_contig9924.19368.1Fucus distichus monoicouspolypeptideF-distichus_contig9924 8109..9056 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig9924.19368.1

>prot_F-distichus_contig9924.19368.1 ID=prot_F-distichus_contig9924.19368.1|Name=mRNA_F-distichus_contig9924.19368.1|organism=Fucus distichus monoicous|type=polypeptide|length=278bp
MEVVARSVLWWCASFGVPKVLTSDGGTHFTGKVMQTVSSRLGVVHHFGVT
NVSWSHGTVERMNHEVVKTFRAVLSERRRPSSEWPLALGAMQWAPKSAYR
KRMGTTPFQMVTGRPPATAMSVLAGEDGDASTVEELDVGRGCLPVFEVGD
YVLLARVWEPGRVPELVQIWTGPCRVVPEESEHVRVGEDIVTRETKEVHV
VRMSPYADSSLVVGAEVCILFEMTKHQDELEIADVISVCKDPARVGEYRV
QIAWVGLEDKEPTWEPMSTVYADAPKH*
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mRNA from alignment at F-distichus_contig9924:8109..9056+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig9924.19368.1 ID=mRNA_F-distichus_contig9924.19368.1|Name=mRNA_F-distichus_contig9924.19368.1|organism=Fucus distichus monoicous|type=mRNA|length=948bp|location=Sequence derived from alignment at F-distichus_contig9924:8109..9056+ (Fucus distichus monoicous)
ATGGAGGTGGTGGCACGTTCAGTGCTGTGGTGGTGTGCCTCGTTTGGGGT GCCCAAGGTGCTCACGAGTGATGGTGGGACGCACTTTACCGGGAAAGTGA TGCAGACGGTGTCGTCCCGATTGGGGGTTGTTCATCATTTTGGCGTGACG AATGTTTCGTGGTCGCATGGGACGGTAGAACGGATGAATCATGAAGTCGT GAAGACGTTTCGTGCGGTCCTCAGCGAAAGACGTCGGCCTTCGAGCGAGT GGCCGTTGGCGTTGGGGGCTATGCAGTGGGCTCCCAAGTCGGCGTACCGG AAGCGCATGGGGACGACGCCGTTCCAGATGGTGACGGGACGACCTCCGGC GACGGCAATGTCGGTGCTTGCAGGGGAAGACGGTGACGCTTCGACTGTGG AGGAGCTAGACGTGTCGTGCGACCAAATGCAGTCCTGAGGTGCTGGTTGG GTGCGAGAGCAGGAAGACTTACGGCGTGACGTCGTAAAGCGCGTTCATGA GCAGCGTGAGCGTGTACGAGAGGTGAGCGGTCGTGGATGCTTGCCGGTTT TTGAGGTTGGTGATTACGTCTTGTTGGCTCGGGTGTGGGAACCAGGTCGT GTGCCTGAGCTCGTACAGATCTGGACTGGACCATGTCGTGTTGTGCCTGA GGAATCAGAGCATGTTCGTGTGGGAGAGGATATTGTCACGAGGGAAACCA AGGAAGTGCACGTGGTGCGAATGAGTCCGTATGCTGATTCGTCTCTGGTC GTGGGGGCAGAGGTCTGCATATTGTTTGAAATGACTAAGCACCAAGATGA GCTTGAGATCGCTGACGTGATCAGTGTTTGTAAGGATCCGGCGCGAGTGG GAGAATACCGGGTGCAGATCGCCTGGGTGGGTCTTGAGGATAAGGAACCT ACTTGGGAACCGATGTCAACTGTCTACGCCGACGCTCCCAAGCACTAG
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Coding sequence (CDS) from alignment at F-distichus_contig9924:8109..9056+

>mRNA_F-distichus_contig9924.19368.1 ID=mRNA_F-distichus_contig9924.19368.1|Name=mRNA_F-distichus_contig9924.19368.1|organism=Fucus distichus monoicous|type=CDS|length=1668bp|location=Sequence derived from alignment at F-distichus_contig9924:8109..9056+ (Fucus distichus monoicous)
ATGGAGGTGGTGGCACGTTCAGTGCTGTGGTGGTGTGCCTCGTTTGGGGT
GCCCAAGGTGCTCACGAGTGATGGTGGGACGCACTTTACCGGGAAAGTGA
TGCAGACGGTGTCGTCCCGATTGGGGGTTGTTCATCATTTTGGCGTGACG
AATGTTTCGTGGTCGCATGGGACGGTAGAACGGATGAATCATGAAGTCGT
GAAGACGTTTCGTGCGGTCCTCAGCGAAAGACGTCGGCCTTCGAGCGAGT
GGCCGTTGGCGTTGGGGGCTATGCAGTGGGCTCCCAAGTCGGCGTACCGG
AAGCGCATGGGGACGACGCCGTTCCAGATGGTGACGGGACGACCTCCGGC
GACGGCAATGTCGGTGCTTGCAGGGGAAGACGGTGACGCTTCGACTGTGG
AGGAGCTAGACGTATGGAGGTGGTGGCACGTTCAGTGCTGTGGTGGTGTG
CCTCGTTTGGGGTGCCCAAGGTGCTCACGAGTGATGGTGGGACGCACTTT
ACCGGGAAAGTGATGCAGACGGTGTCGTCCCGATTGGGGGTTGTTCATCA
TTTTGGCGTGACGAATGTTTCGTGGTCGCATGGGACGGTAGAACGGATGA
ATCATGAAGTCGTGAAGACGTTTCGTGCGGTCCTCAGCGAAAGACGTCGG
CCTTCGAGCGAGTGGCCGTTGGCGTTGGGGGCTATGCAGTGGGCTCCCAA
GTCGGCGTACCGGAAGCGCATGGGGACGACGCCGTTCCAGATGGTGACGG
GACGACCTCCGGCGACGGCAATGTCGGTGCTTGCAGGGGAAGACGGTGAC
GCTTCGACTGTGGAGGAGCTAGACGTCGGTCGTGGATGCTTGCCGGTTTT
TGAGGTTGGTGATTACGTCTTGTTGGCTCGGGTGTGGGAACCAGGTCGTG
TGCCTGAGCTCGTACAGATCTGGACTGGACCATGTCGTGTTGTGCCTGAG
GAATCAGAGCATGTTCGTGTGGGAGAGGATATTGTCACGAGGGAAACCAA
GGAAGTGCACGTGGTGCGAATGAGTCCGTATGCTGATTCGTCTCTGGTCG
TGGGGGCAGAGGTCTGCATATTGTTTGAAATGACTAAGCACCAAGATGAG
CTTGAGATCGCTGACGTGATCAGTGTTTGTAAGGATCCGGCGCGAGTGGG
AGAATACCGGGTGCAGATCGCCTGGGTGGGTCTTGAGGATAAGGAACCTA
CTTGGGAACCGATGTCAACTGTCTACGCCGACGCTCCCAAGCACTAGCGG
TCGTGGATGCTTGCCGGTTTTTGAGGTTGGTGATTACGTCTTGTTGGCTC
GGGTGTGGGAACCAGGTCGTGTGCCTGAGCTCGTACAGATCTGGACTGGA
CCATGTCGTGTTGTGCCTGAGGAATCAGAGCATGTTCGTGTGGGAGAGGA
TATTGTCACGAGGGAAACCAAGGAAGTGCACGTGGTGCGAATGAGTCCGT
ATGCTGATTCGTCTCTGGTCGTGGGGGCAGAGGTCTGCATATTGTTTGAA
ATGACTAAGCACCAAGATGAGCTTGAGATCGCTGACGTGATCAGTGTTTG
TAAGGATCCGGCGCGAGTGGGAGAATACCGGGTGCAGATCGCCTGGGTGG
GTCTTGAGGATAAGGAACCTACTTGGGAACCGATGTCAACTGTCTACGCC
GACGCTCCCAAGCACTAG
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