mRNA_F-distichus_contig9899.19337.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig9899.19337.1 vs. uniprot
Match: D8LDF8_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF8_ECTSI) HSP 1 Score: 269 bits (688), Expect = 3.850e-86 Identity = 140/193 (72.54%), Postives = 160/193 (82.90%), Query Frame = 1
Query: 1 MVFVTLYQRTSSSYDVALQQYLDRVAAGLQPSTSIVDLFNVETEEALLLSTNFLYLGMVVVLYMKMLKRSKPVRFRALMMGYNTLNVCVSLYVACSLLFFKIRSRG----GEHG-----------GGFVCNPLRTDAEGQGIAQVFAVFYLQKYLELVDTVLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPF 534
MVFV LYQR S SY+VAL QY DRVAAGLQPST +V+L++V TEE LL+ NFLYLG+VV+LY++ML+R +PVR RALM+GYNTLNVC+SL+VACSLLFFK+ SRG G G GGFVCNPLRTD +GQ +A+VFAVFYLQKYLELVDT LFLLRRSFRQVTFFHLFHHCSITVIVGS+LPF
Sbjct: 1 MVFVRLYQRVSQSYEVALGQYQDRVAAGLQPSTRVVNLYSVGTEEGLLVCANFLYLGLVVLLYLRMLRRKEPVRLRALMLGYNTLNVCISLFVACSLLFFKVSSRGFNGEGRDGSVVSPGGGGGVGGFVCNPLRTDLQGQMVARVFAVFYLQKYLELVDTFLFLLRRSFRQVTFFHLFHHCSITVIVGSILPF 193
BLAST of mRNA_F-distichus_contig9899.19337.1 vs. uniprot
Match: W7TVB6_9STRA (Elongation of fatty acids protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVB6_9STRA) HSP 1 Score: 147 bits (371), Expect = 4.680e-39 Identity = 87/191 (45.55%), Postives = 115/191 (60.21%), Query Frame = 1
Query: 13 TLYQRTSSSYDVALQQYLDRVAAGLQPSTSIVDLFNVETEEALLLSTNFLYLGMVVVLYMKMLKRSKPVRFRALMMGYNTLNVCVSLYVACSLLFFKIRS---------RGGEHGG-----GFVCNPLRTDAEGQGIAQVFAVFYLQKYLELVDTVLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPFGEG 543
TLY+R + S +A Y R+A GLQP+T +++LF VE +E LL+ N YL + LY M +R K + + ++ YN +NV VS YV+ S+L +K+ S H F+CN L G+A VFAV+YLQKY E +DT F+LRRSFRQVTF HLFHH SITVIVGS++PF G
Sbjct: 20 TLYRRATESLHIAQTAYEHRIAGGLQPTTPLINLFVVENQEQLLVWMNLGYLVLTCGLYAHMRRREKAHQLKQVLTVYNLINVLVSSYVSASILKYKLFSSVLNAPLPQHANSHSPPFIATSFICNQLPLGHP--GLASVFAVYYLQKYFEFLDTYFFILRRSFRQVTFLHLFHHTSITVIVGSLMPFDFG 208
BLAST of mRNA_F-distichus_contig9899.19337.1 vs. uniprot
Match: A0A7S2FL32_9STRA (Elongation of fatty acids protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FL32_9STRA) HSP 1 Score: 106 bits (264), Expect = 9.000e-24 Identity = 71/176 (40.34%), Postives = 101/176 (57.39%), Query Frame = 1
Query: 25 RTSSSYDVALQQYLDRVAAGLQPSTSIVDLFNVETEEALLLSTNFLYLGMVVVLYMKMLKRSKPVR---FRALMMGYNTLNVCVSLYVACSLLFFKIRSRGGEHGGGFVCN-PLRTD--AEGQGIAQVFAVFYLQKYLELVDTVLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPF 534
R +SYD A + +R+AAG QP ++ T L++ N +YL + +LY M KR+ V + ++M YN + V ++ YV +L++K++ G FVCN R D + IA VF VFY QK+ E DT F+LRRSFRQVTF H+FHH SIT +VG++L F
Sbjct: 32 RMLASYDSAWSGFEERLAAGQQPPITMK-----WTNFTFLIAANAIYLTVTYILYSVMSKRTTGVNDKMIKKVIMVYNAVCVFLAGYVVVGMLYYKMQEPGK-----FVCNVSARVDDPEAAKFIAWVFWVFYAQKFWEFCDTWFFILRRSFRQVTFLHIFHHSSITFVVGTILKF 197
BLAST of mRNA_F-distichus_contig9899.19337.1 vs. uniprot
Match: A0A7S2B7C1_9STRA (Elongation of fatty acids protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7C1_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.830e-20 Identity = 68/180 (37.78%), Postives = 98/180 (54.44%), Query Frame = 1
Query: 10 VTLYQRTSSSYDVALQQYLDRVAAGLQPSTSIVDLFNVETEEALLLSTNFLYLGMVVVLYMKMLKRSKPVR---FRALMMGYNTLNVCVSLYVACSLLFFKIRSRGGEHGGGFVCNPLR--TDAEGQGIAQVFAVFYLQKYLELVDTVLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPF 534
V + R S S+ +RVA G+QP+ ++ T LL N +YL + + LY M +R + + + ++ YN + V ++ YV +++ +K+ G FVCN E Q IA VF +FY QK+ E +DT FLLRRSFRQVTF H+FHH SIT +VGS+L F
Sbjct: 16 VGILGRISQSWTENWDLLDERVATGMQPTITLRF-----TSFEFLLYANTVYLLVTLSLYQYMKQRKEGLNDKLLKRIIFYYNAICVGLAGYVVYAMVSYKVTVDAGS----FVCNTSAKPNTPETQYIAFVFWIFYAQKFWEFMDTWFFLLRRSFRQVTFLHIFHHSSITFVVGSILRF 186
BLAST of mRNA_F-distichus_contig9899.19337.1 vs. uniprot
Match: A0A813IE84_POLGL (Elongation of fatty acids protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IE84_POLGL) HSP 1 Score: 94.0 bits (232), Expect = 2.530e-19 Identity = 66/180 (36.67%), Postives = 91/180 (50.56%), Query Frame = 1
Query: 25 RTSSSYDVALQQYLDRVAAGLQPSTSIVDLFNVETEEALLLSTNFLYLGMVVVLYMKMLKRSKPVR---FRALMMGYNTLNVCVSLYVACSLLFFKIRSRGGEHGGGFVCNPLRT-----DAEGQG--IAQVFAVFYLQKYLELVDTVLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPF 534
R +SY + R AAG QPS L A L+ N YL LY M +R + F+++++ YN + V ++ YV +++ FVCN T D G +AQVF VFY QK+ E +DT F+ R+SFRQVTF H+FHHCSI ++VG +LPF
Sbjct: 12 RFVASYSSEWTLWEARAAAGSQPSLPYTGL-------AFLICMNAFYLLFTFGLYRFMEQRKEAFNCKPFKSILLAYNAICVALAGYVVWGIVYIL-----ATEDRSFVCNTTVTPGSAEDKSGSAAFLAQVFWVFYAQKFWEFLDTWFFIARKSFRQVTFLHVFHHCSINLVVGLILPF 179
BLAST of mRNA_F-distichus_contig9899.19337.1 vs. uniprot
Match: A0A7S4FUQ6_9EUGL (Elongation of fatty acids protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FUQ6_9EUGL) HSP 1 Score: 82.0 bits (201), Expect = 1.820e-15 Identity = 60/187 (32.09%), Postives = 96/187 (51.34%), Query Frame = 1
Query: 4 VFVTLYQRTSSSYDVALQQYLDRVAAGLQPSTSIVDL-----FNVETEEALLLSTNFLYLGMVVVLYMKMLKRSKPVR----FRALMMGYNTLNVCVSLYVACSLLFFKIRSRGGEHGGGFVCNPLR-TDAEGQGIAQVFAVFYLQKYLELVDTVLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPF 534
V +L R S+S++ + YL R+A G QP + L F + + N YL + VL + + R + +ALM+ YN + + ++ YVA +L+ K G F CN + A+G+ +A V+Y QKY E +DT +F+L+ S+RQV+F H++HH SITV+ L +
Sbjct: 5 VTASLMDRVSTSFETSHSAYLLRLANGTQPRYGLEGLPAWLAFLDPHNTIAVGAANVAYLVICAVLTILIKARGSGFKAEGMMKALMLVYNAVCMLLAGYVAVGILYVKATGDPGT----FACNKMDLVTAQGRWLAHFIWVYYAQKYWEYLDTWIFILKASWRQVSFLHVYHHISITVVSAIFLRY 187
BLAST of mRNA_F-distichus_contig9899.19337.1 vs. uniprot
Match: A0A196S6Y3_BLAHN (Elongation of fatty acids protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S6Y3_BLAHN) HSP 1 Score: 74.7 bits (182), Expect = 6.970e-13 Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 1
Query: 187 YMKMLKRSKPVRFRALMMGYNTLNVCVSLYVACSLLFFKIRSRGGEHGGGFVCNPLRTDAE-GQGIAQVFAVFYLQKYLELVDTVLFLLRRSFRQVTFFHLFHHCSITVIVGSVLPF 534
+M+ +R P RF M+ YN + V ++ Y ++ + I + C+ + +E + IA VF +FY+QKY E +DT LF+LR+S+RQVTF H++HH SITV+V L +
Sbjct: 47 FMEKRERFNPKRF---MIIYNAICVALATYCFVGMVKYYILKKSP-----LFCSSVDFFSEDAKHIAHVFYIFYVQKYWEFIDTFLFILRKSYRQVTFLHVYHHSSITVVVSLFLHY 155
BLAST of mRNA_F-distichus_contig9899.19337.1 vs. uniprot
Match: D8M728_BLAHO (Elongation of fatty acids protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M728_BLAHO) HSP 1 Score: 73.2 bits (178), Expect = 2.330e-12 Identity = 43/122 (35.25%), Postives = 69/122 (56.56%), Query Frame = 1
Query: 154 NFLYLGMVVVLYMKMLKRSKPVRFRALMMGYNTLNVCVSLYVACSLLFFKIRSRGGEHGGGFVCNPLRTDAE-GQGIAQVFAVFYLQKYLELVDTVLFLLRRSFRQVTFFHLFHHCSITVIV 516
N Y + VL M +R + + M+ YN + VC++ Y +L + G C+ + +E + + +VF VFY+QKY E +DT +F+LR+S+RQVTF H++HH SIT++V
Sbjct: 34 NIFYFVTIYVLMQIMNRREERFNPKKFMIVYNFICVCLATYCFYGMLRYYYLD-----GSVLSCSNIDFASEKAKQLVRVFYVFYIQKYWEFLDTFIFILRKSYRQVTFLHVYHHSSITIMV 150
BLAST of mRNA_F-distichus_contig9899.19337.1 vs. uniprot
Match: UPI000711B6C6 (elongation of very long chain fatty acids protein 4-like protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711B6C6) HSP 1 Score: 72.4 bits (176), Expect = 5.150e-12 Identity = 44/122 (36.07%), Postives = 68/122 (55.74%), Query Frame = 1
Query: 154 NFLYLGMVVVLYMKMLKRSKPVRFRALMMGYNTLNVCVSLYVACSLLFFKIRSRGGEHGGGFVCNPLRTDAEG-QGIAQVFAVFYLQKYLELVDTVLFLLRRSFRQVTFFHLFHHCSITVIV 516
N Y M+ +L +K +++ + + M+ YN + VC++ Y +L + + C+ + D E + IA VFYLQKY E DT LF+LR+S+RQVTF H++HH SIT +V
Sbjct: 36 NVFYFAMIFIL-LKFMEKRERFNPKPFMVVYNFICVCLATYCFYGMLTCYFLKKPFLY-----CSDIDFDTENSKAIAHYVYVFYLQKYWEFTDTFLFILRKSYRQVTFLHVYHHSSITFMV 151
BLAST of mRNA_F-distichus_contig9899.19337.1 vs. uniprot
Match: A0A6N0A507_LOCMI (Elongation of very long chain fatty acids protein n=1 Tax=Locusta migratoria TaxID=7004 RepID=A0A6N0A507_LOCMI) HSP 1 Score: 70.9 bits (172), Expect = 1.770e-11 Identity = 43/138 (31.16%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 145 LSTNFLYLGMVVVLYMKMLKRSKPVRFRALMMGYNTLNVCVSLYVACSLLFFKIRSRGGEHGGGFVCNPLR-TDA-EGQGIAQVFAVFYLQKYLELVDTVLFLLRRSFRQVTFFHLFHHCSI---TVIVGSVLPFGEG 543
+S FLYL V L ++++ +P R +M+ YN + V+LY+ F+K G ++C P+ +DA + +A + ++++ K +L+DTV F+LR+ + Q+TF H++HH ++ T I LP G G
Sbjct: 37 MSIVFLYLYFVNSLGPRLMRDVQPFRIERIMIAYNAFQIAVNLYI-----FYKCTQLGWVDKYSWLCEPVDFSDAPDALEVASICWLYFIVKVTDLLDTVFFVLRKKYNQITFLHVYHHAAMVFGTWIASKYLPGGHG 169 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9899.19337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig9899.19337.1 >prot_F-distichus_contig9899.19337.1 ID=prot_F-distichus_contig9899.19337.1|Name=mRNA_F-distichus_contig9899.19337.1|organism=Fucus distichus monoicous|type=polypeptide|length=182bp MVFVTLYQRTSSSYDVALQQYLDRVAAGLQPSTSIVDLFNVETEEALLLSback to top mRNA from alignment at F-distichus_contig9899:414..6408- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig9899.19337.1 ID=mRNA_F-distichus_contig9899.19337.1|Name=mRNA_F-distichus_contig9899.19337.1|organism=Fucus distichus monoicous|type=mRNA|length=5995bp|location=Sequence derived from alignment at F-distichus_contig9899:414..6408- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig9899:414..6408- >mRNA_F-distichus_contig9899.19337.1 ID=mRNA_F-distichus_contig9899.19337.1|Name=mRNA_F-distichus_contig9899.19337.1|organism=Fucus distichus monoicous|type=CDS|length=1092bp|location=Sequence derived from alignment at F-distichus_contig9899:414..6408- (Fucus distichus monoicous)back to top |