mRNA_F-distichus_contig98955.19333.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig98955.19333.1
Unique NamemRNA_F-distichus_contig98955.19333.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98955.19333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig98955contigF-distichus_contig98955:729..1535 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Hectar predicted targeting categorysignal anchor
Exons1
Model size807
Cds size807
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931170.1566198-CDS-F-distichus_contig98955:728..15351622931170.1566198-CDS-F-distichus_contig98955:728..1535Fucus distichus monoicousCDSF-distichus_contig98955 729..1535 -
1690886188.9025564-CDS-F-distichus_contig98955:728..15351690886188.9025564-CDS-F-distichus_contig98955:728..1535Fucus distichus monoicousCDSF-distichus_contig98955 729..1535 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig98955.19333.1prot_F-distichus_contig98955.19333.1Fucus distichus monoicouspolypeptideF-distichus_contig98955 729..1535 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig98955.19333.1

>prot_F-distichus_contig98955.19333.1 ID=prot_F-distichus_contig98955.19333.1|Name=mRNA_F-distichus_contig98955.19333.1|organism=Fucus distichus monoicous|type=polypeptide|length=269bp
FLRDLFIDNFAFTRRKPKETSEKEIAFWVTKKWRLRFYASLLMTGALFVI
ISLATPGYSIALDAATELSSLEEITQMVSEQFGWEYRPKGTLALILKIAF
GIVTLRIAFWLFSKMDPISDTKLISSIYKNFGNLRRSRQHRPFHEIYTYA
QAAPSNKMRDICNGCGHDIDCPNSYNKSENDSHHGWKLVFNNLSPEALLN
LLHQVHKARSTLYTRLVLFSAAIAAAFVYCAARLYEFLIIGQGVNSNIWL
LFFIAISAILFLIFGLIEP
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mRNA from alignment at F-distichus_contig98955:729..1535-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig98955.19333.1 ID=mRNA_F-distichus_contig98955.19333.1|Name=mRNA_F-distichus_contig98955.19333.1|organism=Fucus distichus monoicous|type=mRNA|length=807bp|location=Sequence derived from alignment at F-distichus_contig98955:729..1535- (Fucus distichus monoicous)
TTCCTCAGAGATTTATTTATTGATAACTTCGCTTTTACAAGAAGAAAACC
GAAGGAGACATCTGAAAAGGAAATAGCATTTTGGGTAACTAAGAAATGGA
GATTGAGATTTTACGCATCTCTATTGATGACCGGAGCACTTTTCGTAATT
ATAAGCTTGGCAACTCCAGGCTACTCAATCGCGCTGGATGCAGCCACTGA
GCTAAGTAGTCTCGAAGAAATAACACAAATGGTGTCTGAGCAATTCGGGT
GGGAGTATCGACCGAAGGGTACGCTGGCGTTAATACTTAAAATCGCATTC
GGAATAGTAACACTGAGAATCGCGTTTTGGTTGTTTAGTAAAATGGACCC
TATAAGCGACACAAAATTGATTTCTTCAATTTACAAGAATTTTGGAAATC
TACGTCGAAGTAGGCAACATCGTCCATTTCATGAAATTTATACTTACGCC
CAAGCAGCGCCATCAAACAAAATGCGGGATATATGTAATGGATGCGGTCA
TGATATCGATTGTCCAAATTCCTATAACAAATCGGAAAATGACTCGCATC
ACGGATGGAAGCTTGTCTTTAATAATCTATCACCTGAAGCACTTTTAAAT
CTTCTTCATCAAGTGCACAAAGCTAGGAGCACACTCTATACCAGATTGGT
TCTTTTCAGCGCTGCTATAGCTGCTGCGTTCGTATATTGTGCGGCAAGGC
TCTACGAATTCCTTATTATCGGACAAGGCGTTAATTCCAATATCTGGCTG
CTTTTTTTTATTGCTATCAGCGCAATATTATTTCTTATCTTTGGCCTGAT
CGAACCC
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Coding sequence (CDS) from alignment at F-distichus_contig98955:729..1535-

>mRNA_F-distichus_contig98955.19333.1 ID=mRNA_F-distichus_contig98955.19333.1|Name=mRNA_F-distichus_contig98955.19333.1|organism=Fucus distichus monoicous|type=CDS|length=1614bp|location=Sequence derived from alignment at F-distichus_contig98955:729..1535- (Fucus distichus monoicous)
TTCCTCAGAGATTTATTTATTGATAACTTCGCTTTTACAAGAAGAAAACC
GAAGGAGACATCTGAAAAGGAAATAGCATTTTGGGTAACTAAGAAATGGA
GATTGAGATTTTACGCATCTCTATTGATGACCGGAGCACTTTTCGTAATT
ATAAGCTTGGCAACTCCAGGCTACTCAATCGCGCTGGATGCAGCCACTGA
GCTAAGTAGTCTCGAAGAAATAACACAAATGGTGTCTGAGCAATTCGGGT
GGGAGTATCGACCGAAGGGTACGCTGGCGTTAATACTTAAAATCGCATTC
GGAATAGTAACACTGAGAATCGCGTTTTGGTTGTTTAGTAAAATGGACCC
TATAAGCGACACAAAATTGATTTCTTCAATTTACAAGAATTTTGGAAATC
TACGTCGAAGTAGGCAACATCGTCCATTTCATGAAATTTATACTTACGCC
CAAGCAGCGCCATCAAACAAAATGCGGGATATATGTAATGGATGCGGTCA
TGATATCGATTGTCCAAATTCCTATAACAAATCGGAAAATGACTCGCATC
ACGGATGGAAGCTTGTCTTTAATAATCTATCACCTGAAGCACTTTTAAAT
CTTCTTCATCAAGTGCACAAAGCTAGGAGCACACTCTATACCAGATTGGT
TCTTTTCAGCGCTGCTATAGCTGCTGCGTTCGTATATTGTGCGGCAAGGC
TCTACGAATTCCTTATTATCGGACAAGGCGTTAATTCCAATATCTGGCTG
CTTTTTTTTATTGCTATCAGCGCAATATTATTTCTTATCTTTGGCCTGAT
CGAACCCTTCCTCAGAGATTTATTTATTGATAACTTCGCTTTTACAAGAA
GAAAACCGAAGGAGACATCTGAAAAGGAAATAGCATTTTGGGTAACTAAG
AAATGGAGATTGAGATTTTACGCATCTCTATTGATGACCGGAGCACTTTT
CGTAATTATAAGCTTGGCAACTCCAGGCTACTCAATCGCGCTGGATGCAG
CCACTGAGCTAAGTAGTCTCGAAGAAATAACACAAATGGTGTCTGAGCAA
TTCGGGTGGGAGTATCGACCGAAGGGTACGCTGGCGTTAATACTTAAAAT
CGCATTCGGAATAGTAACACTGAGAATCGCGTTTTGGTTGTTTAGTAAAA
TGGACCCTATAAGCGACACAAAATTGATTTCTTCAATTTACAAGAATTTT
GGAAATCTACGTCGAAGTAGGCAACATCGTCCATTTCATGAAATTTATAC
TTACGCCCAAGCAGCGCCATCAAACAAAATGCGGGATATATGTAATGGAT
GCGGTCATGATATCGATTGTCCAAATTCCTATAACAAATCGGAAAATGAC
TCGCATCACGGATGGAAGCTTGTCTTTAATAATCTATCACCTGAAGCACT
TTTAAATCTTCTTCATCAAGTGCACAAAGCTAGGAGCACACTCTATACCA
GATTGGTTCTTTTCAGCGCTGCTATAGCTGCTGCGTTCGTATATTGTGCG
GCAAGGCTCTACGAATTCCTTATTATCGGACAAGGCGTTAATTCCAATAT
CTGGCTGCTTTTTTTTATTGCTATCAGCGCAATATTATTTCTTATCTTTG
GCCTGATCGAACCC
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