mRNA_F-distichus_contig9885.19325.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig9885.19325.1
Unique NamemRNA_F-distichus_contig9885.19325.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: D7G6Q7_ECTSI (PYlqF, plastid YlqF/RbgA-like GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Q7_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 6.700e-124
Identity = 186/218 (85.32%), Postives = 197/218 (90.37%), Query Frame = 1
Query:    1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 654
            YPGHIAKAER+LQDYL MVDVV+EVRDCRIPAATTHQLVP W   R L  IVV+NRVD A   AV QWK+YLV EGGLRADNR GNVP FFVDSK+G+GVHEIKKAALKAG+R+N+RR+RRGMNPRSVRVAVIGFPNVGKSALINRLIGK VAKSMN PGVTKK+NWVRLGG DTKPE  LELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV
Sbjct:  174 YPGHIAKAERQLQDYLNMVDVVVEVRDCRIPAATTHQLVPSWVGKRPL--IVVLNRVDTASPTAVEQWKKYLVAEGGLRADNRGGNVPVFFVDSKRGRGVHEIKKAALKAGSRVNDRRVRRGMNPRSVRVAVIGFPNVGKSALINRLIGKKVAKSMNKPGVTKKMNWVRLGGKDTKPEQNLELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 389          
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A835ZND5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZND5_9STRA)

HSP 1 Score: 306 bits (783), Expect = 6.150e-100
Identity = 151/217 (69.59%), Postives = 177/217 (81.57%), Query Frame = 1
Query:    1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQ 651
            YPGHIAKAER L++YLK+VDVV+EVRD RIP +TTH LVP+W   R L  +VVM R D+APA A+  WKRY   E G+    R  NVP FFVDSK+GK V  +KKA LKAGA +NE+R+ RG+NPRSVRVAVIG+PNVGKSALIN+L+GK+VAKS N+PGVTKK+NW+RLGG D + + ELELLDSPGIIPA+QEDQ  ALKLAICNDIGQASYD Q
Sbjct:   89 YPGHIAKAERTLEEYLKLVDVVVEVRDARIPISTTHPLVPRWVGGRPL--VVVMARSDVAPAKAIDDWKRYYTQEKGMAQTGRRSNVPVFFVDSKRGKHVFLVKKAVLKAGAHVNEKRVSRGINPRSVRVAVIGYPNVGKSALINQLVGKAVAKSRNLPGVTKKINWIRLGGQDNRIDQELELLDSPGIIPAKQEDQESALKLAICNDIGQASYDPQ 303          
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A4D9DA39_9STRA (G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA39_9STRA)

HSP 1 Score: 267 bits (682), Expect = 3.250e-84
Identity = 140/223 (62.78%), Postives = 169/223 (75.78%), Query Frame = 1
Query:    1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGN--VPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGT---DTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 654
            YPGHIAKAERELQD+LK+VDVV+E RD RIP ATTH LV +W   R L  IV M R DMAP+AA+ +W  + V     RA +R G   VP  FVDS++G  +H +K  ALKAGA +NERR R G+ PRS+RVAVIG+PNVGKSA+IN+LIG+ +AKS N+PGVTK+++WVRLG      ++ E ELELLDSPGIIPA+Q DQ  A KLA+CNDIGQASYD QV
Sbjct:  102 YPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRRPL--IVAMTRKDMAPSAAIKEWSDFYVQSA--RAAHRIGQPRVPVVFVDSRQGTDIHRLKMIALKAGAAVNERRARLGLLPRSIRVAVIGYPNVGKSAIINKLIGRRLAKSKNMPGVTKRISWVRLGAAAMGSSRKEEELELLDSPGIIPAKQVDQATAFKLAVCNDIGQASYDVQV 320          
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A482SIN3_9ARCH (Ribosome biogenesis GTPase YlqF n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIN3_9ARCH)

HSP 1 Score: 252 bits (644), Expect = 6.050e-80
Identity = 133/218 (61.01%), Postives = 158/218 (72.48%), Query Frame = 1
Query:    1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 654
            YPGHIAKAEREL +YLK VDVVIEV D RIP ATTH +VP+W  S+ L  IV + R+D    AA+ +WK+Y              +   +F++ K G GV  +K+ ALKAG  +NERRMRRG+ PR+VR AVIGFPNVGKSALINRL+GK +AKS N+PGVT+ L WVR+GG      H LELLDSPGIIPARQ DQ+ ALKLAICNDIG+ASYD  V
Sbjct:   17 YPGHIAKAERELAEYLKKVDVVIEVIDARIPFATTHPIVPQWVGSKPL--IVAVARLDQVSTAALKEWKKYYTQ---YPVHPERPDAKIYFINGKLGAGVLSLKRQALKAGEAVNERRMRRGIQPRAVRAAVIGFPNVGKSALINRLLGKKMAKSRNLPGVTRALQWVRVGGLQGPQGHVLELLDSPGIIPARQFDQDSALKLAICNDIGEASYDRVV 229          
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A7S4D8U7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8U7_HETAK)

HSP 1 Score: 251 bits (640), Expect = 6.350e-79
Identity = 131/225 (58.22%), Postives = 166/225 (73.78%), Query Frame = 1
Query:    1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLG-------GTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 654
            YPGHIAKAE +L++YLK+VDVV+E RD RI  +TTH  V  W   R    IVV+NR D  P+ A+  WK++L+   G     +    P FFV+SK+G G+H +K+A LKAGA +NERR+RRG+ PR++R A+IG+PNVGKSALINRLIG++VA+S N+PGVT+ LNW R+G       G   K   ELELLDSPGIIPA+Q DQ+ A++LAICNDIGQASYDTQV
Sbjct:   57 YPGHIAKAESQLKEYLKLVDVVVECRDARILESTTHPSVADWIGKRPH--IVVVNREDAIPSGAIDLWKKHLLYTSGRSGKKK----PVFFVNSKRGTGIHTVKRAILKAGAFVNERRVRRGIQPRAIRTAIIGYPNVGKSALINRLIGRAVARSKNIPGVTRTLNWHRIGRHQGQAQGQGAKSS-ELELLDSPGIIPAKQVDQSTAVRLAICNDIGQASYDTQV 274          
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A7S0T146_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T146_9STRA)

HSP 1 Score: 243 bits (621), Expect = 3.220e-77
Identity = 127/218 (58.26%), Postives = 157/218 (72.02%), Query Frame = 1
Query:    1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 654
            YPGHIAKAEREL  YL  VDVVIEVRD RIP ATTH  VP+W   + L + VV  R D     A+ QWK Y        A     +   FF+D+K G+G+  +KK ALKAG  +N++R++RG+ PR+VR AVIGFPNVGKSALIN+L+G+ +AKS ++PGVT++L WVRLGG +   E+ +ELLDSPGIIPARQ DQ  A+KLAICNDIG+ASYD  V
Sbjct:   65 YPGHIAKAERELASYLSKVDVVIEVRDARIPLATTHPKVPEWVNKKPLIIAVV--RYDQISNHALNQWKEYYAMNP---AHTERPDAKVFFIDNKTGQGIISLKKEALKAGILVNQKRVKRGIQPRAVRAAVIGFPNVGKSALINQLLGRRIAKSRDMPGVTRQLMWVRLGGLEGSQENVIELLDSPGIIPARQLDQFNAIKLAICNDIGEASYDRVV 277          
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A7S2V344_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V344_9STRA)

HSP 1 Score: 248 bits (632), Expect = 4.900e-77
Identity = 133/235 (56.60%), Postives = 164/235 (69.79%), Query Frame = 1
Query:    1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGTDTKPEH-----------------ELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 654
            YPGHIAKAE  L++YLKMVDVVIEVRD RI  +TTH +V +W  +R L  +V +NR+D      +  W+R+L  E           V  FFV+SK+G G+HE+K+AALKAGA +NERR RRG+ PR+VR AVIG+PNVGKSALINRL+G++VAKSMN PGVT+ L WVR+G   ++                    ELELLDSPGIIPA+Q  Q+ A +LAICNDIGQASYDTQV
Sbjct:  111 YPGHIAKAEHNLKEYLKMVDVVIEVRDARILQSTTHPMVKEWVGNRPL--LVCVNRMDCVGVDTLNVWRRHLNAEAARSEAEGGAKVSYFFVNSKRGGGIHEVKRAALKAGAFVNERRARRGIRPRAVRAAVIGYPNVGKSALINRLVGRAVAKSMNTPGVTRVLTWVRIGRRHSEKVGQASARGGSGGHVQGSLPELELLDSPGIIPAKQVSQDCATRLAICNDIGQASYDTQV 343          
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A7S2RRC8_9STRA (Hypothetical protein n=3 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRC8_9STRA)

HSP 1 Score: 238 bits (608), Expect = 6.660e-74
Identity = 124/217 (57.14%), Postives = 155/217 (71.43%), Query Frame = 1
Query:    1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQ 651
            YPGH+AKAE++L D L+ VDVV+E+RD RIP AT H LV  W +  A   IVV  R DM P +AV +W RYL ++            P F+VD K+G GV E+K+A L AG  +N+RR  RG+ PR VR AVIGFPNVGKSALIN+L+GK  A S N PGVT+ L W+R+GG ++    ++ELLDSPGIIPA+Q DQN ALKLAICNDIG+ASYD++
Sbjct:   65 YPGHVAKAEKQLVDCLQRVDVVVELRDARIPEATAHPLVDGW-VGNAKPRIVVFARKDMVPGSAVAEWHRYLTSKPDYNG------APIFWVDGKRGAGVRELKRAVLSAGEYVNKRRENRGIRPRPVRAAVIGFPNVGKSALINQLVGKKRAVSENRPGVTRSLQWIRIGGDNS----QIELLDSPGIIPAKQVDQNCALKLAICNDIGEASYDSE 270          
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A7R9U7N3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7N3_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.930e-71
Identity = 120/218 (55.05%), Postives = 159/218 (72.94%), Query Frame = 1
Query:    1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLG-GTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQ 651
            YPGHIAKAER+L +Y+K VD+VIEVRD RIP +TTH +V  W  S+    IVV NR D APA AV  W+++ V+         +   P F  ++K  +GVHEIKKA L+ GA +NE+R ++G+ PR++R+AVIGFPNVGKSALINRL+G+ +A+S + PGVT++L W+RLG G D     ++ELLDSPGIIPA+Q DQ  A  LA+CNDIG ASY+++
Sbjct:   91 YPGHIAKAERQLAEYMKCVDIVIEVRDARIPFSTTHPMVSTWIGSKPH--IVVFNRKDCAPAVAVTHWRKHFVDLAKQSESEGSPGKPIFAFNAKAQEGVHEIKKACLQLGAHVNEKREKKGLLPRAIRIAVIGFPNVGKSALINRLLGRKMARSADTPGVTRQLTWIRLGKGRDGA---DIELLDSPGIIPAKQVDQRAAEALAMCNDIGVASYESE 303          
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: R7QJP3_CHOCR (CP-type G domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJP3_CHOCR)

HSP 1 Score: 228 bits (580), Expect = 3.880e-70
Identity = 118/218 (54.13%), Postives = 153/218 (70.18%), Query Frame = 1
Query:    1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 654
            YPGHIAKAER L++ +KMVDVV+EVRDCRIP AT H  V +W  +R    I+ MNR D+AP  A  QW+++LV +G              F+++K+G+GV E+KK A+ AG+ +NE+R R+G+ PR VR  VIG+PNVGKSALINRL+G+  AKS N PGVT+   WVR+  T       +ELLD PGIIPA+ E Q  A++LAIC+DIGQA+YD QV
Sbjct:   96 YPGHIAKAERTLKECIKMVDVVVEVRDCRIPLATAHPDVERWIGNRTR--ILAMNRADLAPEVARAQWRKHLVEQG----------EKVRFINAKQGRGVKELKKLAIDAGSFVNEKRTRKGLLPRPVRCLVIGYPNVGKSALINRLVGRKAAKSANKPGVTRNYQWVRISDT-------IELLDMPGIIPAKLERQESAVRLAICDDIGQAAYDAQV 294          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Q7_ECTSI6.700e-12485.32PYlqF, plastid YlqF/RbgA-like GTPase n=2 Tax=Ectoc... [more]
A0A835ZND5_9STRA6.150e-10069.59P-loop containing nucleoside triphosphate hydrolas... [more]
A0A4D9DA39_9STRA3.250e-8462.78G domain-containing protein n=2 Tax=Monodopsidacea... [more]
A0A482SIN3_9ARCH6.050e-8061.01Ribosome biogenesis GTPase YlqF n=1 Tax=archaeon T... [more]
A0A7S4D8U7_HETAK6.350e-7958.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0T146_9STRA3.220e-7758.26Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S2V344_9STRA4.900e-7756.60Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RRC8_9STRA6.660e-7457.14Hypothetical protein n=3 Tax=Rhizochromulina marin... [more]
A0A7R9U7N3_9STRA1.930e-7155.05Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
R7QJP3_CHOCR3.880e-7054.13CP-type G domain-containing protein n=1 Tax=Chondr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9885contigF-distichus_contig9885:6024..7877 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score369.4
Seed ortholog evalue1.2e-99
Seed eggNOG ortholog2880.D7G6Q7
KEGG koko:K19828
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003924,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022613,GO:0042254,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071840
EggNOG free text desc.guanine nucleotide-binding protein-like
EggNOG OGsCOG1161@1,KOG2484@2759
Ec32 ortholog descriptionPYlqF, plastid YlqF/RbgA-like GTPase
Ec32 orthologEc-26_000500.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009,ko03029
Exons5
Model size660
Cds size660
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9885.19325.1prot_F-distichus_contig9885.19325.1Fucus distichus monoicouspolypeptideF-distichus_contig9885 6024..7877 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931169.3831112-CDS-F-distichus_contig9885:6023..61551622931169.3831112-CDS-F-distichus_contig9885:6023..6155Fucus distichus monoicousCDSF-distichus_contig9885 6024..6155 -
1690886188.5570197-CDS-F-distichus_contig9885:6023..61551690886188.5570197-CDS-F-distichus_contig9885:6023..6155Fucus distichus monoicousCDSF-distichus_contig9885 6024..6155 -
1622931169.4007385-CDS-F-distichus_contig9885:6708..69301622931169.4007385-CDS-F-distichus_contig9885:6708..6930Fucus distichus monoicousCDSF-distichus_contig9885 6709..6930 -
1690886188.5704703-CDS-F-distichus_contig9885:6708..69301690886188.5704703-CDS-F-distichus_contig9885:6708..6930Fucus distichus monoicousCDSF-distichus_contig9885 6709..6930 -
1622931169.4169173-CDS-F-distichus_contig9885:7234..73971622931169.4169173-CDS-F-distichus_contig9885:7234..7397Fucus distichus monoicousCDSF-distichus_contig9885 7235..7397 -
1690886188.5815432-CDS-F-distichus_contig9885:7234..73971690886188.5815432-CDS-F-distichus_contig9885:7234..7397Fucus distichus monoicousCDSF-distichus_contig9885 7235..7397 -
1622931169.4328215-CDS-F-distichus_contig9885:7650..76671622931169.4328215-CDS-F-distichus_contig9885:7650..7667Fucus distichus monoicousCDSF-distichus_contig9885 7651..7667 -
1690886188.5976617-CDS-F-distichus_contig9885:7650..76671690886188.5976617-CDS-F-distichus_contig9885:7650..7667Fucus distichus monoicousCDSF-distichus_contig9885 7651..7667 -
1622931169.4508157-CDS-F-distichus_contig9885:7751..78771622931169.4508157-CDS-F-distichus_contig9885:7751..7877Fucus distichus monoicousCDSF-distichus_contig9885 7752..7877 -
1690886188.6122339-CDS-F-distichus_contig9885:7751..78771690886188.6122339-CDS-F-distichus_contig9885:7751..7877Fucus distichus monoicousCDSF-distichus_contig9885 7752..7877 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig9885.19325.1

>prot_F-distichus_contig9885.19325.1 ID=prot_F-distichus_contig9885.19325.1|Name=mRNA_F-distichus_contig9885.19325.1|organism=Fucus distichus monoicous|type=polypeptide|length=220bp
YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRL
IVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGV
HEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGK
SVAKSMNVPGVTKKLNWVRLGGTDTKPEHELELLDSPGIIPARQEDQNQA
LKLAICNDIGQASYDTQVS*
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mRNA from alignment at F-distichus_contig9885:6024..7877-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig9885.19325.1 ID=mRNA_F-distichus_contig9885.19325.1|Name=mRNA_F-distichus_contig9885.19325.1|organism=Fucus distichus monoicous|type=mRNA|length=1854bp|location=Sequence derived from alignment at F-distichus_contig9885:6024..7877- (Fucus distichus monoicous)
TATCCGGGCCACATCGCAAAGGCGGAGCGGGAGCTGCAAGATTACCTCAA GATGGTGGATGTCGTGATCGAGGTCCGCGATTGCCGAATACCCGCGGCCA CGACGCATCAGTTAGTGCCCAAGTGGGTGGGCAACAGGCGAGTCTCTTCA ACACCTTGCGGCAGGCTTACTTAAGTCCCCTACACATTCATAGCGCCGTG CCACTACGAGTTTATATCCAGAGCATTGTACTGAGATTACTGCAGCACTA GACCTCAAAAAGACGCGTGGCGCTCGCTCCGGAAGCTATCTCTCCGTTCT GCTCGCATATTACCAAACGCTAGCAGTTCGACTGGGGCGTCGCGGTTGCT TCCGGTCGCCTTTAGCTTATCCTCGTGGCTTAATAACAATCGATGCAAGA AGTGATATCAGCTCTTCGACGTTTGCGTTCTCGTCCAAACTGCTGCTGCT GCTGCTTTCCCGTACCAACTTACTCCGCAGGCGGCTCATCGTAGTCATGA ATCGGGTGGATATGGCCCCCGCCGCAGCGGTGGGGCAATGGAAGAGGTAC CTGGTCAACGAGGGGGGATTGCGTGCGGACAATCGGGCTGGCAACGTTCC GGCCTTTTTCGTGGACTCGAAGAAGGGCAAGGGGGTGCACGAGGTGCTTG CTCACGGGATCAGCTCGTGGTTTGACGCCATGCGACGTCGCGCCTGCAAT ATTTTTTACCAAGAATGGGGGAATATTATCTTGACTCAAGCTACTTAACA CAAACGCTACAGTACAACCGCGAAACATTTTTGCAGGCTTCGTGCGTCTA GTACACCTGCCCCTGAAGGCCTGTTTCCCTGGTTGATTAGAGGGGGCATA ACTGAGCGATCCCTTTTGCAATATTTGGCGCTCACAACAGTACTTCGTCT TCCTTTTAACATATTCATTCGCGACGCAAACACGTCAATTTGGTCAGATC AAGAAGGCCGCACTTAAGGCTGGGGCGAGGATGAACGAGCGACGCATGAG GCGTGGGATGAACCCTCGCAGCGTGCGAGTGGCGGTGATCGGGTTTCCTA ACGTGGGCAAGAGCGCACTGATCAATAGGCTGATAGGAAAGAGCGTGGCG AAGTCGATGAACGTGCCTGGCGTCACCAAAAAGTTGAATTGGGTTCGGCT CGGCGGTACAGACACCAAGGTGTGATATTTCCACCTCCTCAGATGTACGT ATCTTGTGTTCTTCGCCGTCCGCGTTTGTGTACGTAGGGTACAGTATTTC ATGATAGAGGGAAACCTGACACGCTTTGCCACGAAGGCTTTCAGTTTGTA CTGTACATTTTTTCCCCCTGACTGGGGGATGCTCAGAAGGTCTAGGTGCG TTCTGTATTTTCTTCAAAGACAGCCCGTGCTCCCACAATACACCCACGAC GCAACTACCGTTACTGTGGTGACTTGAGCCGAAAGAAATTTCCGGCACGA GACTCTCTCTCCCGAAAGAACGCTCTACGCATAAGATGCACACAAAAATA TCGAGACAATAGATGCCCCAGGTCGCCCATGGGCTGAATATTGCTTCCGG TAAACGTGGTGTCATTTTTATGGAGATCGATGCCTTCCGTCGTTAAATTT TTTCAACAAGCGGGCAAAAAAAACGCCTGTTCGTTACCCCCGCTGATTCT GGCATGTCTGGCAAATGCCGCAACTGCGTATCGATAAGTCGTGTTACATT GACCTTTTATTTACTTGTGCAGCCGGAGCACGAGCTGGAGCTCCTAGACT CTCCGGGTATCATCCCCGCCAGACAGGAGGATCAGAATCAAGCCCTGAAA CTGGCCATCTGTAACGATATCGGCCAAGCATCGTACGACACTCAAGTGAG CTGA
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Coding sequence (CDS) from alignment at F-distichus_contig9885:6024..7877-

>mRNA_F-distichus_contig9885.19325.1 ID=mRNA_F-distichus_contig9885.19325.1|Name=mRNA_F-distichus_contig9885.19325.1|organism=Fucus distichus monoicous|type=CDS|length=1320bp|location=Sequence derived from alignment at F-distichus_contig9885:6024..7877- (Fucus distichus monoicous)
TATCCGGGCCACATCGCAAAGGCGGAGCGGGAGCTGCAAGATTACCTCAA
GATGGTGGATGTCGTGATCGAGGTCCGCGATTGCCGAATACCCGCGGCCA
CGACGCATCAGTTAGTGCCCAAGTGGTATCCGGGCCACATCGCAAAGGCG
GAGCGGGAGCTGCAAGATTACCTCAAGATGGTGGATGTCGTGATCGAGGT
CCGCGATTGCCGAATACCCGCGGCCACGACGCATCAGTTAGTGCCCAAGT
GGTTTATATCCAGAGCATTTTTATATCCAGAGCATTGCGGCTCATCGTAG
TCATGAATCGGGTGGATATGGCCCCCGCCGCAGCGGTGGGGCAATGGAAG
AGGTACCTGGTCAACGAGGGGGGATTGCGTGCGGACAATCGGGCTGGCAA
CGTTCCGGCCTTTTTCGTGGACTCGAAGAAGGGCAAGGGGGTGCACGAGG
CGGCTCATCGTAGTCATGAATCGGGTGGATATGGCCCCCGCCGCAGCGGT
GGGGCAATGGAAGAGGTACCTGGTCAACGAGGGGGGATTGCGTGCGGACA
ATCGGGCTGGCAACGTTCCGGCCTTTTTCGTGGACTCGAAGAAGGGCAAG
GGGGTGCACGAGATCAAGAAGGCCGCACTTAAGGCTGGGGCGAGGATGAA
CGAGCGACGCATGAGGCGTGGGATGAACCCTCGCAGCGTGCGAGTGGCGG
TGATCGGGTTTCCTAACGTGGGCAAGAGCGCACTGATCAATAGGCTGATA
GGAAAGAGCGTGGCGAAGTCGATGAACGTGCCTGGCGTCACCAAAAAGTT
GAATTGGGTTCGGCTCGGCGGTACAGACACCAAGATCAAGAAGGCCGCAC
TTAAGGCTGGGGCGAGGATGAACGAGCGACGCATGAGGCGTGGGATGAAC
CCTCGCAGCGTGCGAGTGGCGGTGATCGGGTTTCCTAACGTGGGCAAGAG
CGCACTGATCAATAGGCTGATAGGAAAGAGCGTGGCGAAGTCGATGAACG
TGCCTGGCGTCACCAAAAAGTTGAATTGGGTTCGGCTCGGCGGTACAGAC
ACCAAGCCGGAGCACGAGCTGGAGCTCCTAGACTCTCCGGGTATCATCCC
CGCCAGACAGGAGGATCAGAATCAAGCCCTGAAACTGGCCATCTGTAACG
ATATCGGCCAAGCATCGTACGACACTCAAGTGAGCTGACCGGAGCACGAG
CTGGAGCTCCTAGACTCTCCGGGTATCATCCCCGCCAGACAGGAGGATCA
GAATCAAGCCCTGAAACTGGCCATCTGTAACGATATCGGCCAAGCATCGT
ACGACACTCAAGTGAGCTGA
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