mRNA_F-distichus_contig9885.19325.1 (mRNA) Fucus distichus monoicous
|
Overview
Homology
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: D7G6Q7_ECTSI (PYlqF, plastid YlqF/RbgA-like GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Q7_ECTSI) HSP 1 Score: 370 bits (950), Expect = 6.700e-124 Identity = 186/218 (85.32%), Postives = 197/218 (90.37%), Query Frame = 1
Query: 1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 654
YPGHIAKAER+LQDYL MVDVV+EVRDCRIPAATTHQLVP W R L IVV+NRVD A AV QWK+YLV EGGLRADNR GNVP FFVDSK+G+GVHEIKKAALKAG+R+N+RR+RRGMNPRSVRVAVIGFPNVGKSALINRLIGK VAKSMN PGVTKK+NWVRLGG DTKPE LELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV
Sbjct: 174 YPGHIAKAERQLQDYLNMVDVVVEVRDCRIPAATTHQLVPSWVGKRPL--IVVLNRVDTASPTAVEQWKKYLVAEGGLRADNRGGNVPVFFVDSKRGRGVHEIKKAALKAGSRVNDRRVRRGMNPRSVRVAVIGFPNVGKSALINRLIGKKVAKSMNKPGVTKKMNWVRLGGKDTKPEQNLELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 389
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A835ZND5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZND5_9STRA) HSP 1 Score: 306 bits (783), Expect = 6.150e-100 Identity = 151/217 (69.59%), Postives = 177/217 (81.57%), Query Frame = 1
Query: 1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQ 651
YPGHIAKAER L++YLK+VDVV+EVRD RIP +TTH LVP+W R L +VVM R D+APA A+ WKRY E G+ R NVP FFVDSK+GK V +KKA LKAGA +NE+R+ RG+NPRSVRVAVIG+PNVGKSALIN+L+GK+VAKS N+PGVTKK+NW+RLGG D + + ELELLDSPGIIPA+QEDQ ALKLAICNDIGQASYD Q
Sbjct: 89 YPGHIAKAERTLEEYLKLVDVVVEVRDARIPISTTHPLVPRWVGGRPL--VVVMARSDVAPAKAIDDWKRYYTQEKGMAQTGRRSNVPVFFVDSKRGKHVFLVKKAVLKAGAHVNEKRVSRGINPRSVRVAVIGYPNVGKSALINQLVGKAVAKSRNLPGVTKKINWIRLGGQDNRIDQELELLDSPGIIPAKQEDQESALKLAICNDIGQASYDPQ 303
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A4D9DA39_9STRA (G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA39_9STRA) HSP 1 Score: 267 bits (682), Expect = 3.250e-84 Identity = 140/223 (62.78%), Postives = 169/223 (75.78%), Query Frame = 1
Query: 1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGN--VPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGT---DTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 654
YPGHIAKAERELQD+LK+VDVV+E RD RIP ATTH LV +W R L IV M R DMAP+AA+ +W + V RA +R G VP FVDS++G +H +K ALKAGA +NERR R G+ PRS+RVAVIG+PNVGKSA+IN+LIG+ +AKS N+PGVTK+++WVRLG ++ E ELELLDSPGIIPA+Q DQ A KLA+CNDIGQASYD QV
Sbjct: 102 YPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRRPL--IVAMTRKDMAPSAAIKEWSDFYVQSA--RAAHRIGQPRVPVVFVDSRQGTDIHRLKMIALKAGAAVNERRARLGLLPRSIRVAVIGYPNVGKSAIINKLIGRRLAKSKNMPGVTKRISWVRLGAAAMGSSRKEEELELLDSPGIIPAKQVDQATAFKLAVCNDIGQASYDVQV 320
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A482SIN3_9ARCH (Ribosome biogenesis GTPase YlqF n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIN3_9ARCH) HSP 1 Score: 252 bits (644), Expect = 6.050e-80 Identity = 133/218 (61.01%), Postives = 158/218 (72.48%), Query Frame = 1
Query: 1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 654
YPGHIAKAEREL +YLK VDVVIEV D RIP ATTH +VP+W S+ L IV + R+D AA+ +WK+Y + +F++ K G GV +K+ ALKAG +NERRMRRG+ PR+VR AVIGFPNVGKSALINRL+GK +AKS N+PGVT+ L WVR+GG H LELLDSPGIIPARQ DQ+ ALKLAICNDIG+ASYD V
Sbjct: 17 YPGHIAKAERELAEYLKKVDVVIEVIDARIPFATTHPIVPQWVGSKPL--IVAVARLDQVSTAALKEWKKYYTQ---YPVHPERPDAKIYFINGKLGAGVLSLKRQALKAGEAVNERRMRRGIQPRAVRAAVIGFPNVGKSALINRLLGKKMAKSRNLPGVTRALQWVRVGGLQGPQGHVLELLDSPGIIPARQFDQDSALKLAICNDIGEASYDRVV 229
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A7S4D8U7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8U7_HETAK) HSP 1 Score: 251 bits (640), Expect = 6.350e-79 Identity = 131/225 (58.22%), Postives = 166/225 (73.78%), Query Frame = 1
Query: 1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLG-------GTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 654
YPGHIAKAE +L++YLK+VDVV+E RD RI +TTH V W R IVV+NR D P+ A+ WK++L+ G + P FFV+SK+G G+H +K+A LKAGA +NERR+RRG+ PR++R A+IG+PNVGKSALINRLIG++VA+S N+PGVT+ LNW R+G G K ELELLDSPGIIPA+Q DQ+ A++LAICNDIGQASYDTQV
Sbjct: 57 YPGHIAKAESQLKEYLKLVDVVVECRDARILESTTHPSVADWIGKRPH--IVVVNREDAIPSGAIDLWKKHLLYTSGRSGKKK----PVFFVNSKRGTGIHTVKRAILKAGAFVNERRVRRGIQPRAIRTAIIGYPNVGKSALINRLIGRAVARSKNIPGVTRTLNWHRIGRHQGQAQGQGAKSS-ELELLDSPGIIPAKQVDQSTAVRLAICNDIGQASYDTQV 274
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A7S0T146_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T146_9STRA) HSP 1 Score: 243 bits (621), Expect = 3.220e-77 Identity = 127/218 (58.26%), Postives = 157/218 (72.02%), Query Frame = 1
Query: 1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 654
YPGHIAKAEREL YL VDVVIEVRD RIP ATTH VP+W + L + VV R D A+ QWK Y A + FF+D+K G+G+ +KK ALKAG +N++R++RG+ PR+VR AVIGFPNVGKSALIN+L+G+ +AKS ++PGVT++L WVRLGG + E+ +ELLDSPGIIPARQ DQ A+KLAICNDIG+ASYD V
Sbjct: 65 YPGHIAKAERELASYLSKVDVVIEVRDARIPLATTHPKVPEWVNKKPLIIAVV--RYDQISNHALNQWKEYYAMNP---AHTERPDAKVFFIDNKTGQGIISLKKEALKAGILVNQKRVKRGIQPRAVRAAVIGFPNVGKSALINQLLGRRIAKSRDMPGVTRQLMWVRLGGLEGSQENVIELLDSPGIIPARQLDQFNAIKLAICNDIGEASYDRVV 277
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A7S2V344_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V344_9STRA) HSP 1 Score: 248 bits (632), Expect = 4.900e-77 Identity = 133/235 (56.60%), Postives = 164/235 (69.79%), Query Frame = 1
Query: 1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGTDTKPEH-----------------ELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 654
YPGHIAKAE L++YLKMVDVVIEVRD RI +TTH +V +W +R L +V +NR+D + W+R+L E V FFV+SK+G G+HE+K+AALKAGA +NERR RRG+ PR+VR AVIG+PNVGKSALINRL+G++VAKSMN PGVT+ L WVR+G ++ ELELLDSPGIIPA+Q Q+ A +LAICNDIGQASYDTQV
Sbjct: 111 YPGHIAKAEHNLKEYLKMVDVVIEVRDARILQSTTHPMVKEWVGNRPL--LVCVNRMDCVGVDTLNVWRRHLNAEAARSEAEGGAKVSYFFVNSKRGGGIHEVKRAALKAGAFVNERRARRGIRPRAVRAAVIGYPNVGKSALINRLVGRAVAKSMNTPGVTRVLTWVRIGRRHSEKVGQASARGGSGGHVQGSLPELELLDSPGIIPAKQVSQDCATRLAICNDIGQASYDTQV 343
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A7S2RRC8_9STRA (Hypothetical protein n=3 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRC8_9STRA) HSP 1 Score: 238 bits (608), Expect = 6.660e-74 Identity = 124/217 (57.14%), Postives = 155/217 (71.43%), Query Frame = 1
Query: 1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQ 651
YPGH+AKAE++L D L+ VDVV+E+RD RIP AT H LV W + A IVV R DM P +AV +W RYL ++ P F+VD K+G GV E+K+A L AG +N+RR RG+ PR VR AVIGFPNVGKSALIN+L+GK A S N PGVT+ L W+R+GG ++ ++ELLDSPGIIPA+Q DQN ALKLAICNDIG+ASYD++
Sbjct: 65 YPGHVAKAEKQLVDCLQRVDVVVELRDARIPEATAHPLVDGW-VGNAKPRIVVFARKDMVPGSAVAEWHRYLTSKPDYNG------APIFWVDGKRGAGVRELKRAVLSAGEYVNKRRENRGIRPRPVRAAVIGFPNVGKSALINQLVGKKRAVSENRPGVTRSLQWIRIGGDNS----QIELLDSPGIIPAKQVDQNCALKLAICNDIGEASYDSE 270
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: A0A7R9U7N3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7N3_9STRA) HSP 1 Score: 233 bits (593), Expect = 1.930e-71 Identity = 120/218 (55.05%), Postives = 159/218 (72.94%), Query Frame = 1
Query: 1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLG-GTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQ 651
YPGHIAKAER+L +Y+K VD+VIEVRD RIP +TTH +V W S+ IVV NR D APA AV W+++ V+ + P F ++K +GVHEIKKA L+ GA +NE+R ++G+ PR++R+AVIGFPNVGKSALINRL+G+ +A+S + PGVT++L W+RLG G D ++ELLDSPGIIPA+Q DQ A LA+CNDIG ASY+++
Sbjct: 91 YPGHIAKAERQLAEYMKCVDIVIEVRDARIPFSTTHPMVSTWIGSKPH--IVVFNRKDCAPAVAVTHWRKHFVDLAKQSESEGSPGKPIFAFNAKAQEGVHEIKKACLQLGAHVNEKREKKGLLPRAIRIAVIGFPNVGKSALINRLLGRKMARSADTPGVTRQLTWIRLGKGRDGA---DIELLDSPGIIPAKQVDQRAAEALAMCNDIGVASYESE 303
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Match: R7QJP3_CHOCR (CP-type G domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJP3_CHOCR) HSP 1 Score: 228 bits (580), Expect = 3.880e-70 Identity = 118/218 (54.13%), Postives = 153/218 (70.18%), Query Frame = 1
Query: 1 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLIVVMNRVDMAPAAAVGQWKRYLVNEGGLRADNRAGNVPAFFVDSKKGKGVHEIKKAALKAGARMNERRMRRGMNPRSVRVAVIGFPNVGKSALINRLIGKSVAKSMNVPGVTKKLNWVRLGGTDTKPEHELELLDSPGIIPARQEDQNQALKLAICNDIGQASYDTQV 654
YPGHIAKAER L++ +KMVDVV+EVRDCRIP AT H V +W +R I+ MNR D+AP A QW+++LV +G F+++K+G+GV E+KK A+ AG+ +NE+R R+G+ PR VR VIG+PNVGKSALINRL+G+ AKS N PGVT+ WVR+ T +ELLD PGIIPA+ E Q A++LAIC+DIGQA+YD QV
Sbjct: 96 YPGHIAKAERTLKECIKMVDVVVEVRDCRIPLATAHPDVERWIGNRTR--ILAMNRADLAPEVARAQWRKHLVEQG----------EKVRFINAKQGRGVKELKKLAIDAGSFVNEKRTRKGLLPRPVRCLVIGYPNVGKSALINRLVGRKAAKSANKPGVTRNYQWVRISDT-------IELLDMPGIIPAKLERQESAVRLAICDDIGQAAYDAQV 294 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9885.19325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig9885.19325.1 >prot_F-distichus_contig9885.19325.1 ID=prot_F-distichus_contig9885.19325.1|Name=mRNA_F-distichus_contig9885.19325.1|organism=Fucus distichus monoicous|type=polypeptide|length=220bp YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWFISRALRLback to top mRNA from alignment at F-distichus_contig9885:6024..7877- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig9885.19325.1 ID=mRNA_F-distichus_contig9885.19325.1|Name=mRNA_F-distichus_contig9885.19325.1|organism=Fucus distichus monoicous|type=mRNA|length=1854bp|location=Sequence derived from alignment at F-distichus_contig9885:6024..7877- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig9885:6024..7877- >mRNA_F-distichus_contig9885.19325.1 ID=mRNA_F-distichus_contig9885.19325.1|Name=mRNA_F-distichus_contig9885.19325.1|organism=Fucus distichus monoicous|type=CDS|length=1320bp|location=Sequence derived from alignment at F-distichus_contig9885:6024..7877- (Fucus distichus monoicous)back to top |