mRNA_F-distichus_contig98753.19315.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig98753.19315.1 vs. uniprot
Match: D8LHJ6_ECTSI (tRNA (Guanine-n(7)-)-methyltransferase complex subunit, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ6_ECTSI) HSP 1 Score: 196 bits (497), Expect = 1.030e-56 Identity = 133/229 (58.08%), Postives = 145/229 (63.32%), Query Frame = 1
Query: 1 DPSVALKHLLGHTAMTITATAFLRKGTLLATADRAEHIRVSQFPRTSIVHAYLLGHTDFVSALAPVPGED-SLLLSGGGDGMVGLWDAERGERLAMISVRRACQDLADGDEQPPPREDESRHQGEGDGGGVHPPSEGVEGMDLEEGGGGXXXXXX--------------ENGSSGADDGGVGKCQKGGKSGELGSGRNSQRGDGAEEGGVPLSIACSEDGRTVAVAVSG 642
DPS ALKHLLGHTAMTITA L++G LLATADRAEHIRVSQFPRT+IVH YLLGH DFVSALA VPGE ++LLSGGGDG VGLW+AE G LAMISVR+ACQDLADGD SEGV MDLEE G XXXXX +NG SGAD G G+ GG + E G VPLS++CSEDGRTVAV VSG
Sbjct: 109 DPSSALKHLLGHTAMTITAMVTLKRGQLLATADRAEHIRVSQFPRTTIVHTYLLGHQDFVSALAAVPGEGGTMLLSGGGDGRVGLWEAEAGRELAMISVRQACQDLADGDNA----------------------SEGVATMDLEEEEGSKXXXXXXXXXXXXXGDASSCKNGDSGADSRGEGEAGSGGVTSETPKGXXXXX----XXXXVPLSVSCSEDGRTVAVVVSG 311
BLAST of mRNA_F-distichus_contig98753.19315.1 vs. uniprot
Match: A0A6H5KN97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN97_9PHAE) HSP 1 Score: 172 bits (437), Expect = 2.750e-47 Identity = 98/145 (67.59%), Postives = 105/145 (72.41%), Query Frame = 1
Query: 1 DPSVALKHLLGHTAMTITATAFLRKGTLLATADRAEHIRVSQFPRTSIVHAYLLGHTDFVSALAPVPGED-SLLLSGGGDGMVGLWDAERGERLAMISVRRACQDLADGDEQPPPREDESRHQGEGDGGGVHPPSEGVEGMDLEE 432
DPS ALKHLLGHTAMTITA L+ G LLATADRAEH+RVSQFPRT+IVH YLLGH DFVSALA VPGE ++LLSGGGDG VGLWDAE G LAMISVR+ACQDLADGD+ SEGV MDLEE
Sbjct: 204 DPSSALKHLLGHTAMTITAMVTLKGGQLLATADRAEHVRVSQFPRTTIVHTYLLGHQDFVSALAAVPGEGGAMLLSGGGDGRVGLWDAEAGRELAMISVRQACQDLADGDDA----------------------SEGVATMDLEE 326
BLAST of mRNA_F-distichus_contig98753.19315.1 vs. uniprot
Match: A0A6P5AL06_BRABE (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5AL06_BRABE) HSP 1 Score: 80.9 bits (198), Expect = 3.030e-14 Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 1
Query: 1 DPSVALKHLLGHTAMTITATAFLRKGTLLATADRAEHIRVSQFPRTSIVHAYLLGHTDFVSALAPVPGEDSLLLSGGGDGMVGLWDAERGERLAMISVRRACQDLAD 321
DP LLGH +M + A + L T DR E IR+S +P T ++ Y LGHT++++AL P D +LLSGGGDG V +WD +G+ L + + + C+ L D
Sbjct: 145 DPEAPGTLLLGHLSMLLDI-AIKDDDSFLVTCDRDEKIRISHYPNTHSIYGYCLGHTEYITALCLSPYPDGILLSGGGDGTVRVWDWLKGKELHVEHLAKFCRGLKD 250
BLAST of mRNA_F-distichus_contig98753.19315.1 vs. uniprot
Match: WDR4_XENLA (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 n=6 Tax=Xenopus laevis TaxID=8355 RepID=WDR4_XENLA) HSP 1 Score: 79.3 bits (194), Expect = 9.560e-14 Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 28 LGHTAMTITATAFLRKGTLLATADRAEHIRVSQFPRTSIVHAYLLGHTDFVSALAPVPGEDSLLLSGGGDGMVGLWDAERGERLAMISVRRACQDLAD 321
LGH +M + T L G + T DR E IRVS + ++ ++ LGHT+FVS L P+PG++ LLLSG GDG + LW+ E G+ + +++R +L D
Sbjct: 136 LGHLSMLLDVTVSL-DGKHIITCDRDEKIRVSCWGAPHVIMSFCLGHTEFVSQLLPLPGQEKLLLSGSGDGTLRLWEYESGKEVHSVTLRSLAHELED 232
BLAST of mRNA_F-distichus_contig98753.19315.1 vs. uniprot
Match: W7I7G6_9PEZI (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 n=1 Tax=Drechslerella stenobrocha 248 TaxID=1043628 RepID=W7I7G6_9PEZI) HSP 1 Score: 77.8 bits (190), Expect = 4.260e-13 Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = 1
Query: 19 KHLLGHTAMTITATAFL-RKGT----LLATADRAEHIRVSQFPRTSIVHAYLLGHTDFVSALAPVPGEDSLLLSGGGDGMVGLWDAERGERLAMISVRRACQDLADGDE 330
K LLGH ++ T T+ GT + TADR EHIRV+ +P T ++H + L HT FVS L D+LL+SGGGD +G+W+ + GE L + VR ++L G+E
Sbjct: 236 KLLLGHVSLLTTLTSSSSNNGTSERKFVITADRDEHIRVTNYPLTHVIHGFCLAHTAFVSRLLVTA--DNLLVSGGGDDWLGVWNWKDGELLQQVDVRGVVEELFTGEE 342
BLAST of mRNA_F-distichus_contig98753.19315.1 vs. uniprot
Match: A0A397G950_9GLOM (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397G950_9GLOM) HSP 1 Score: 77.4 bits (189), Expect = 4.910e-13 Identity = 42/100 (42.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query: 1 DPSVALKHLLGHTAMTITATAFLRKGTLLATADRAEHIRVSQFPRTSIVHAYLLGHTDFVSALAPVPGEDSLLLSGGGDGMVGLWDAERGERLAMISVRR 300
D + + LLGH +M IT + TADR EHIRVS+FP+ + ++ LGHT FVS L +P + +LLLSGGGD V LWD G + + +++
Sbjct: 144 DDKSSCELLLGHVSM-ITDMVLTSDNKFIITADRDEHIRVSRFPKGYKIESFCLGHTQFVSKLNILPWDSNLLLSGGGDDFVVLWDFVSGMLIQQLDIKQ 242
BLAST of mRNA_F-distichus_contig98753.19315.1 vs. uniprot
Match: A0A1V8SDL1_9PEZI (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 n=1 Tax=Rachicladosporium antarcticum TaxID=1507870 RepID=A0A1V8SDL1_9PEZI) HSP 1 Score: 76.3 bits (186), Expect = 1.410e-12 Identity = 51/110 (46.36%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 10 VALKH--LLGHTAMT---ITATAFLRKGT--LLATADRAEHIRVSQFPRTS-IVHAYLLGHTDFVSALAPVPGEDSLLLSGGGDGMVGLWDAERGERLAMISVRRACQDL 315
+A +H LLGH +M I AT + T + TADR EHIRVS+ P S ++ Y LGHTDFVS + +PG D LL+SGGG+ +G+WD R E LA + +R+A L
Sbjct: 220 LAFEHRLLLGHVSMLTDMIHATREVDGKTRRYILTADRDEHIRVSRGPPQSHVIEGYCLGHTDFVSKICLIPGSD-LLVSGGGNDWLGVWDWPRCELLAKVDLRKAISHL 328
BLAST of mRNA_F-distichus_contig98753.19315.1 vs. uniprot
Match: A0A0J9XE16_GEOCN (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XE16_GEOCN) HSP 1 Score: 75.9 bits (185), Expect = 1.660e-12 Identity = 41/98 (41.84%), Postives = 58/98 (59.18%), Query Frame = 1
Query: 7 SVALKHLLGHTAMTITATAFLRKGT-LLATADRAEHIRVSQFPRTSIVHAYLLGHTDFVSALAPVPGEDSLLLSGGGDGMVGLWDAERGERLAMISVR 297
S +++ +LGH +M + G + TADR EHIRVS+FP+ I+ +L GHT+FVS L VP + LLLSGGGD + +W+ G L +R
Sbjct: 170 SASIQPILGHVSMLVDIQIAEADGKQYVITADRDEHIRVSKFPQAYIIDRWLFGHTEFVSELTLVPWKPELLLSGGGDDFLAVWNWTTGALLQKFEIR 267
BLAST of mRNA_F-distichus_contig98753.19315.1 vs. uniprot
Match: A0A8H3ZVV6_GIGMA (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 n=3 Tax=Gigaspora TaxID=4873 RepID=A0A8H3ZVV6_GIGMA) HSP 1 Score: 75.5 bits (184), Expect = 2.430e-12 Identity = 40/97 (41.24%), Postives = 54/97 (55.67%), Query Frame = 1
Query: 19 KHLLGHTAMTITATAFLRKGTLLATADRAEHIRVSQFPRTSIVHAYLLGHTDFVSALAPVPGEDSLLLSGGGDGMVGLWDAERGERLAMISVRRACQ 309
K LLGH +M +T + TADR EHIRVSQFP+ + +Y GHT F+S L +P + LLLS GGD + LWD G + + ++ Q
Sbjct: 151 KLLLGHVSM-VTDMVLTPNNKFVITADRDEHIRVSQFPKGYNIKSYCFGHTQFLSKLHILPWDSDLLLSAGGDDFIALWDYVPGRLIQTLDIKNLIQ 246
BLAST of mRNA_F-distichus_contig98753.19315.1 vs. uniprot
Match: F2QNQ7_KOMPC (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 n=2 Tax=Komagataella phaffii TaxID=460519 RepID=F2QNQ7_KOMPC) HSP 1 Score: 75.1 bits (183), Expect = 3.030e-12 Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 1
Query: 19 KHLLGHTAMTITATAFLRKGTLLATADRAEHIRVSQFPRTSIVHAYLLGHTDFVSALAPVPGEDSLLLSGGGDGMVGLWDAERGERLAMISVRRACQDL 315
K +LGH +M +T F + + T+DR EHIRV+Q+P+T I+ YL GH+ FVS L P + +L+SGGGD + +W+ G+ L + + Q L
Sbjct: 177 KSILGHVSM-LTNVIFAKNH--IITSDRDEHIRVTQYPKTYIIERYLFGHSQFVSCLKLCPWNEDILISGGGDDFINIWNWTTGDLLFHLDLTSYVQPL 272 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98753.19315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig98753.19315.1 >prot_F-distichus_contig98753.19315.1 ID=prot_F-distichus_contig98753.19315.1|Name=mRNA_F-distichus_contig98753.19315.1|organism=Fucus distichus monoicous|type=polypeptide|length=215bp DPSVALKHLLGHTAMTITATAFLRKGTLLATADRAEHIRVSQFPRTSIVHback to top mRNA from alignment at F-distichus_contig98753:631..2136- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig98753.19315.1 ID=mRNA_F-distichus_contig98753.19315.1|Name=mRNA_F-distichus_contig98753.19315.1|organism=Fucus distichus monoicous|type=mRNA|length=1506bp|location=Sequence derived from alignment at F-distichus_contig98753:631..2136- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig98753:631..2136- >mRNA_F-distichus_contig98753.19315.1 ID=mRNA_F-distichus_contig98753.19315.1|Name=mRNA_F-distichus_contig98753.19315.1|organism=Fucus distichus monoicous|type=CDS|length=1290bp|location=Sequence derived from alignment at F-distichus_contig98753:631..2136- (Fucus distichus monoicous)back to top |