mRNA_F-distichus_contig98446.19281.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig98446.19281.1 vs. uniprot
Match: D7FVG0_ECTSI (Centaurin, beta 5, isoform CRA_a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVG0_ECTSI) HSP 1 Score: 183 bits (464), Expect = 6.820e-52 Identity = 94/138 (68.12%), Postives = 118/138 (85.51%), Query Frame = 1
Query: 1 MKQDMNRASEDHEHAMARFLQLKRNSEEGITQARAGEVAMAKKRFEMARFDLVQHLNQLETRKKHEVVDRTCSALYAFLKMFQECHMLVASTEPHMRELQQALKLSREELEREDQMWTVKRSDLETSLNEGIPASAVL 414
MKQ+MNR+ ED+EH+MARFLQLKRNSEEG+TQARA EVA++KKRFEMARFDLV+HL+ LET+KKHEVV RTC+AL+AFL +FQ C+ LVASTE +REL+ AL LSR++L++ED +W +R LE SLN+ IP +A L
Sbjct: 1 MKQEMNRSCEDYEHSMARFLQLKRNSEEGVTQARAAEVALSKKRFEMARFDLVRHLSLLETKKKHEVVGRTCTALHAFLALFQRCNGLVASTEQRLRELECALTLSRQDLDQEDGVWLARRDQLEASLNKAIPPNAAL 138
BLAST of mRNA_F-distichus_contig98446.19281.1 vs. uniprot
Match: A0A6H5L2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J8_9PHAE) HSP 1 Score: 176 bits (446), Expect = 1.600e-48 Identity = 92/141 (65.25%), Postives = 117/141 (82.98%), Query Frame = 1
Query: 1 MKQDMNRASEDHEHAMARFLQLKRNSEEGITQARAGEVAMAKKRFEMARFDLVQHLNQLETRKKHEVVDRTCSALYAFLKMFQECHMLVASTEPHMRELQQALKLSRE---ELEREDQMWTVKRSDLETSLNEGIPASAVL 414
MKQ+MNR+ ED+EH+MARFLQLKRNSEEG+TQAR+ EVA++KKRFEMARFD V HL+QLET+KKHEVV RTC+AL+AFL +FQ C+ LVASTE +REL+ AL LSR+ +L++E+ +W +R LE SLN+ IP +A L
Sbjct: 118 MKQEMNRSCEDYEHSMARFLQLKRNSEEGVTQARSAEVALSKKRFEMARFDFVHHLSQLETKKKHEVVGRTCTALHAFLALFQRCNGLVASTEQRLRELECALTLSRQASSDLDKEEGVWLARRDQLEASLNKAIPPNAAL 258
BLAST of mRNA_F-distichus_contig98446.19281.1 vs. uniprot
Match: A0A835ZCL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL2_9STRA) HSP 1 Score: 123 bits (309), Expect = 5.130e-30 Identity = 74/172 (43.02%), Postives = 102/172 (59.30%), Query Frame = 1
Query: 1 MKQDMNRASEDHEHAMARFLQLKRNSEEGITQARAGE-------VAMAKKRFEMARFDLVQHLNQLETRKKHEV------------------------------VDRTCSALYAFLKMFQECHMLVASTEPHMRELQQALKLSREELEREDQMWTVKRSDLETSLNEGIPAS 405
MKQ+++RASED+E + + LQLKRNSE+ Q R+ VA ++RFE++RFDLV HLNQLET+KK ++ V+R CSALYAFL F +CH LVA+ EP MR+LQ AL L+R++ ++D++WT KR LE LN + A+
Sbjct: 462 MKQEVSRASEDYEAHLFKLLQLKRNSEDAQFQVRSAXXXXXXXXVAATRRRFELSRFDLVHHLNQLETKKKFQLAVGQRLARQNKKRGTLSTGDAQRLAFAVDEVERVCSALYAFLGYFHQCHTLVATVEPSMRDLQHALHLARKDFAKDDRLWTAKRMQLEMQLNRQVGAA 633
BLAST of mRNA_F-distichus_contig98446.19281.1 vs. uniprot
Match: A0A7R9YAC1_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAC1_9STRA) HSP 1 Score: 106 bits (265), Expect = 4.260e-24 Identity = 54/129 (41.86%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 1 MKQDMNRASEDHEHAMARFLQLKRNSEEGITQARAGEVAMAKKRFEMARFDLVQHLNQLETRKKHEVVDRTCSALYAFLKMFQECHMLVASTEPHMRELQQALKLSREELEREDQMWTVKRSDLETSLN 387
MK + R+ E+HE + + LQL+ +++ + R + + KR E+ARFDLV LNQLE +KK ++V+R C+ LYA L F +CH+++A+ EP MR+LQ AL+L+R++ D++W KR LE L+
Sbjct: 277 MKVESQRSLEEHEQDLGKLLQLRNDADAAVVSQRKQAASASYKRHELARFDLVHELNQLEMKKKFQLVERVCNGLYAELGYFHQCHIVMANMEPRMRDLQLALQLARKKFAGADRIWAAKRKQLEIKLD 405
BLAST of mRNA_F-distichus_contig98446.19281.1 vs. uniprot
Match: A0A7S1U8B4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8B4_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.070e-22 Identity = 51/119 (42.86%), Postives = 78/119 (65.55%), Query Frame = 1
Query: 31 DHEHAMARFLQLKRNSEEGITQARAGEVAMAKKRFEMARFDLVQHLNQLETRKKHEVVDRTCSALYAFLKMFQECHMLVASTEPHMRELQQALKLSREELEREDQMWTVKRSDLETSLN 387
+HE +AR LQL +++ + AR + + KR E+ARFDLV LNQLE RKK ++ +R C+ LYA L F +CH+++A+ EP MR++Q AL ++R++ D++W KR LE L+
Sbjct: 223 EHETNLARLLQLHNDADADMVAARQDAASASFKRHELARFDLVHELNQLEMRKKFQIAERVCNGLYADLGFFHQCHIVMATLEPSMRDMQHALSVARKKFAGHDRIWLAKRKQLELRLD 341
BLAST of mRNA_F-distichus_contig98446.19281.1 vs. uniprot
Match: A0A662XKE9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XKE9_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.470e-16 Identity = 44/101 (43.56%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 109 EVAMAKKRFEMARFDLVQHLNQLETRKKHEVVDRTCSALYAFLKMFQECHMLVASTEPHMRELQQALKLSREELEREDQMWTVKRSDLETSLNEGIPASAV 411
EV A++RFE+ARFDLV++LN+L+ KK +V+ S LYA L F CH LV + EP +RE Q+ +++SR++ E+++QMWT +R L+ L + +V
Sbjct: 427 EVVQARRRFELARFDLVRYLNRLDCMKKFVLVECFNSTLYALLGHFHACHELVKAVEPALRERQEMMQVSRQDFEQDEQMWTAQRELLDKRLAHDVDVMSV 527
BLAST of mRNA_F-distichus_contig98446.19281.1 vs. uniprot
Match: A0A4D9CVE4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVE4_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 3.800e-16 Identity = 51/130 (39.23%), Postives = 80/130 (61.54%), Query Frame = 1
Query: 1 MKQDMNRASEDHEHAMARFLQ-LKRNSEEGITQARAGEVAMAKKRFEMARFDLVQHLNQLETRKKHEVVDRTCSALYAFLKMFQECHMLVASTEPHMRELQQALKLSREELEREDQMWTVKRSDLETSLN 387
+K + RA ED+ + R LQ L+R ++ + +AR ++ ++R+E+ R DLV LNQLET+KK ++V+R ALYA+L F + H +A+ EP MR+LQ L LSR + + ++ KR LE L+
Sbjct: 447 LKDAVGRAYEDYVAHLQRHLQQLRRGTDPEVLRARTQDLIGVRRRYELGRIDLVNTLNQLETKKKFQLVERVLCALYAYLGYFHQGHEALAAIEPSMRDLQCQLSLSRRQFSKRARITEAKRMQLELLLS 576
BLAST of mRNA_F-distichus_contig98446.19281.1 vs. uniprot
Match: D0N718_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N718_PHYIT) HSP 1 Score: 81.6 bits (200), Expect = 2.440e-15 Identity = 41/98 (41.84%), Postives = 67/98 (68.37%), Query Frame = 1
Query: 109 EVAMAKKRFEMARFDLVQHLNQLETRKKHEVVDRTCSALYAFLKMFQECHMLVASTEPHMRELQQALKLSREELEREDQMWTVKRSDLETSLNEGIPA 402
+V A++RFE+ARFDLV+H+N+++ KK +V+ S LYA L F CH L+ S EP +R Q+ ++LSR++ E+++ MWT +R L+ L++ + A
Sbjct: 704 DVVTARRRFELARFDLVRHMNRVDCMKKFVLVECFNSILYAQLGHFHACHELIKSVEPSLRRRQEMMQLSRKDFEQDELMWTAQRELLDKRLSQDVEA 801
BLAST of mRNA_F-distichus_contig98446.19281.1 vs. uniprot
Match: H3GSJ5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSJ5_PHYRM) HSP 1 Score: 80.1 bits (196), Expect = 8.210e-15 Identity = 40/96 (41.67%), Postives = 69/96 (71.88%), Query Frame = 1
Query: 109 EVAMAKKRFEMARFDLVQHLNQLETRKKHEVVDRTCSALYAFLKMFQECHMLVASTEPHMRELQQALKLSREELEREDQMWTVKRSDLETSLNEGI 396
+V +A++RFE+ARFDLV+++N+++ KK +V+ S LYA L F CH LV S EP +R+ Q+ +++SR++LE+++QMW +R L+ L++ +
Sbjct: 360 DVVVARRRFELARFDLVRYMNRIDCMKKFVLVECFNSILYAQLGHFHACHELVKSVEPTLRKRQEMMQVSRKDLEQDEQMWVSQRQLLDKRLSQDV 455
BLAST of mRNA_F-distichus_contig98446.19281.1 vs. uniprot
Match: G4YYS8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YYS8_PHYSP) HSP 1 Score: 77.0 bits (188), Expect = 1.000e-13 Identity = 39/98 (39.80%), Postives = 68/98 (69.39%), Query Frame = 1
Query: 109 EVAMAKKRFEMARFDLVQHLNQLETRKKHEVVDRTCSALYAFLKMFQECHMLVASTEPHMRELQQALKLSREELEREDQMWTVKRSDLETSLNEGIPA 402
+V +A++RFE+ARFDLV+++N+++ KK +V+ S LYA L F CH LV S EP +R+ Q+ +++SR++ E+++ MW +R L+ L++ + A
Sbjct: 676 DVVVARRRFELARFDLVRYMNRIDCMKKFVLVECFNSILYAQLGHFHACHELVKSVEPTLRKRQEMMQVSRKDFEQDEVMWASQRELLDKRLSQDVDA 773 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98446.19281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig98446.19281.1 >prot_F-distichus_contig98446.19281.1 ID=prot_F-distichus_contig98446.19281.1|Name=mRNA_F-distichus_contig98446.19281.1|organism=Fucus distichus monoicous|type=polypeptide|length=138bp MKQDMNRASEDHEHAMARFLQLKRNSEEGITQARAGEVAMAKKRFEMARFback to top mRNA from alignment at F-distichus_contig98446:498..2137+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig98446.19281.1 ID=mRNA_F-distichus_contig98446.19281.1|Name=mRNA_F-distichus_contig98446.19281.1|organism=Fucus distichus monoicous|type=mRNA|length=1640bp|location=Sequence derived from alignment at F-distichus_contig98446:498..2137+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig98446:498..2137+ >mRNA_F-distichus_contig98446.19281.1 ID=mRNA_F-distichus_contig98446.19281.1|Name=mRNA_F-distichus_contig98446.19281.1|organism=Fucus distichus monoicous|type=CDS|length=828bp|location=Sequence derived from alignment at F-distichus_contig98446:498..2137+ (Fucus distichus monoicous)back to top |