mRNA_F-distichus_contig984.19276.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig984.19276.1
Unique NamemRNA_F-distichus_contig984.19276.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig984.19276.1 vs. uniprot
Match: A0A6H5KIW5_9PHAE (Aqp protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIW5_9PHAE)

HSP 1 Score: 319 bits (818), Expect = 2.510e-101
Identity = 167/267 (62.55%), Postives = 202/267 (75.66%), Query Frame = 1
Query:  190 RKFELGIVFEGQ--QQDGKNRIF-SYNMFRAAFAEYVGMLIFLFNVITVARLAGRRDWED---EASASIILIALEFGLSIFTLIYILAQASGAHLNPAVSLGLLVGKRISVEKFVIYVIIQMFGAMTGASIATVFLDSTGGGYNAINDGFIAANAFGGEVLCTFLLVLTVFAACDGELGRKDAFIGPLVPWAIGMAVLLAHLIMVPIDGCSINPARSFANAFTNNKWEDHWVFWIGPLLGGVLATVMWEAILRPEQPVHSASTEKQA 972
            R++ELG+  E Q  Q++G    F  Y +FR+   E++G ++FLF VITVAR +  R  E    EA+A+II+I+  FGLSIF L+YI    SGAHLNPAVS+GLLVGKRISVE+F++YVI QM GA  GA IA+ +L +T GG+NA+ D   A +AFG EVLCTFLLV+TVFAACDGELGRK A  GPL+P  IGMAVLLAHL+++PIDG SINPARSFA A TNN+W DHWVFW+GPLLGGVLATV WEAILRP+Q V       QA
Sbjct:    9 REWELGLTSEAQIRQENGTTEPFVGYRLFRSLCGEFLGCMLFLFMVITVARFSDDRIQEGITTEATANIIMISSAFGLSIFVLVYIFVDVSGAHLNPAVSIGLLVGKRISVERFLLYVIAQMAGATAGAGIASTYLSTTRGGFNALADNVSATDAFGAEVLCTFLLVVTVFAACDGELGRKTAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNEWGDHWVFWVGPLLGGVLATVTWEAILRPDQVVEQEKNVPQA 275          
BLAST of mRNA_F-distichus_contig984.19276.1 vs. uniprot
Match: A0A6H5JZJ3_9PHAE (Aqp protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ3_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 6.140e-100
Identity = 164/266 (61.65%), Postives = 201/266 (75.56%), Query Frame = 1
Query:  169 MEETVYARKFELGIVFEGQQQDGKNRI----FSYNMFRAAFAEYVGMLIFLFNVITVARLAGRRDWED---EASASIILIALEFGLSIFTLIYILAQASGAHLNPAVSLGLLVGKRISVEKFVIYVIIQMFGAMTGASIATVFLDSTGGGYNAINDGFIAANAFGGEVLCTFLLVLTVFAACDGELGRKDAFIGPLVPWAIGMAVLLAHLIMVPIDGCSINPARSFANAFTNNKWEDHWVFWIGPLLGGVLATVMWEAILRPEQPV 945
            M +T+ AR++ELG++ E Q+      +      Y +FR+   E++G L+FLF  ITVARLAG R+  D   E SA+I +I+  FGLSIF L+YI A  SGAHLNPAVS+ LLVGKRIS+E+F +YV+ QM G + GAS+A  F  +TGGG+NAI DG  A  AFG EVLCTFLLV+TVF ACDGELGRK+A  GPL+P  IGMAVL+AHL+++PIDGCSINPARSFA A  NNKW+DHWVFW+GPLLGGVL T  WEAILRP+Q V
Sbjct:  236 MAQTIKAREWELGLITEAQRCKESKTVEPPFLGYRLFRSVCGEFLGCLLFLFMAITVARLAGNREDGDAAAEQSAAIFMISSAFGLSIFVLVYIFADVSGAHLNPAVSMSLLVGKRISIERFGLYVVAQMAGGVIGASMANSFPSTTGGGFNAIADGVSAIEAFGAEVLCTFLLVVTVFTACDGELGRKNAHTGPLLPLVIGMAVLIAHLVLIPIDGCSINPARSFATAVINNKWDDHWVFWVGPLLGGVLGTATWEAILRPDQTV 501          
BLAST of mRNA_F-distichus_contig984.19276.1 vs. uniprot
Match: D8LTV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV4_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 1.150e-85
Identity = 147/263 (55.89%), Postives = 180/263 (68.44%), Query Frame = 1
Query:  178 TVYARKFELGIVFEGQQQDGKNRI----FSYNMFRAAFAEYVGMLIFLFNVITVARLAGRRDWED---EASASIILIALEFGLSIFTLIYILAQASGAHLNPAVSLGLLVGKRISVEKFVIYVIIQMFGAMTGASIATVFLDSTGGGYNAINDGFIAANAFGGEVLCTFLLVLTVFAACDGELGRKDAFIGPLVPWAIGMAVLLAHLIMVPIDGCSINPARSFANAFTNNKWEDHWVFWIGPLLGGVLATVMWEAILRPEQPV 945
            T+ AR++ELG++ E Q+      +      Y +FR+   E++G L+FLF  ITVARLAG R+  D   E +A+I++I+  FGLSIF L+YI A  SGAHLNPAVS+ LLVGKRIS+E+F +YV  Q                              A  AFG EVLCTFLLV+TVF ACDGELGRK+A  GPL+P  IGMAVL+AHL+++PIDGCSINPARSFA A  NNKW+DHWVFW+GPLLGGVL T  WEAILRP+QPV
Sbjct:   29 TMKAREWELGLITETQRCKESKTVEPPFLGYRLFRSVCGEFLGCLLFLFMAITVARLAGNREDGDAAGEQTATILMISSAFGLSIFVLVYIFADVSGAHLNPAVSMSLLVGKRISIERFGLYVAAQ------------------------------AGEAFGAEVLCTFLLVVTVFTACDGELGRKNAHTGPLLPLVIGMAVLIAHLVLIPIDGCSINPARSFATAVINNKWDDHWVFWVGPLLGGVLGTATWEAILRPDQPV 261          
BLAST of mRNA_F-distichus_contig984.19276.1 vs. uniprot
Match: A0A835YY46_9STRA (Aquaporin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY46_9STRA)

HSP 1 Score: 209 bits (531), Expect = 9.430e-59
Identity = 117/291 (40.21%), Postives = 171/291 (58.76%), Query Frame = 1
Query:  190 RKFELGIVFEGQQQDGKNRIFSYNMFRAAFAEYVGMLIFLFNVITVA---RLAGRRDWEDEASASI--ILIALEFGLSIFTLIYILAQASGAHLNPAVSLGLLVGKRISVEKFVIYVIIQMFGAMTGASIATVFLDS----TGGGYNAINDGFIAANAFGGEVLCTFLLVLTVFAACDGELGRKDAFIGPLVPWAIGMAVLLAHLIMVPIDGCSINPARSFANAFTNNKWEDHWVFWIGPLLGGVLATVMWEAILRPEQPVHSASTEKQAAPIVPTDTSVAPITIHGEFPE 1035
            R +++GIV        K+  +S+++FR    E +   +FL+  IT     R+    +  + A+ S   +LIA  FGL+IF L+Y+ A  SGA++NPAVS GL +GKRI++++  +Y+I Q  GA+ G  +A     +    T GG N +N+   A  A GGE+LCT+LLV  V  A +  L +       L+PW IGM V+L H  +VP+DGCSINPARSF +A   N W+DHWVFW+GPL+G  +AT+++EAILRP +P      E   A +  T    +  + HG + E
Sbjct:   11 RAWQIGIV--------KDEPWSHDLFRGIVGELIATTLFLYVCITTVVFMRIDNISEVNNGATGSTERLLIAFNFGLAIFVLVYLFADVSGANINPAVSWGLCLGKRITLKRCGLYIIAQCLGAIIGVGLACSMSKAHFWETNGGANVVNNQVGAHQALGGEILCTWLLVTVVLCATNPGLQKAYVHQAVLLPWVIGMTVMLCHFTLVPVDGCSINPARSFGSAIITNTWKDHWVFWLGPLIGATIATLLFEAILRPPEPAPKLEAEDPQAKLYETSNQNSS-SRHGAYDE 292          
BLAST of mRNA_F-distichus_contig984.19276.1 vs. uniprot
Match: A0A836CE69_9STRA (Transmembrane channel protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE69_9STRA)

HSP 1 Score: 187 bits (474), Expect = 3.620e-50
Identity = 115/275 (41.82%), Postives = 155/275 (56.36%), Query Frame = 1
Query:  172 EETVYARKFELGIVFEGQQQDGKNRIFSYNMFRAAFAEYVGMLIFLFNVITVARLAGRRDWEDEASASIILIALEFGLSIFTLIYILAQASGAHLNPAVSLGLLVGKRISVEKFVIYVIIQMFGAMTGASIATVFLDS-----TGGGYNAINDGFIAANAFGGEVLCTFLLVLTVFAACDGELGRKDAFIGP--LVPWAIGMAVLLAHLIMVPIDGCSINPARSFANAFTNNKWEDHWVFWIGPLLGGVLATVMWEAILRPEQPV-HSASTEKQA 972
            E  V  R  +LG V   ++ D      SY  FRA   E + M  FL+NVITV             S   +LIAL FGLSIF L+Y  A  SG +LNPAV+  L++GKRISV + + Y+  QM GA+ G + A V   S       GG N +  G  A  A   E+L T ++ L V      EL       G   L+P A+G A++LAH++++PIDGCS+NPARSF  A  + +W D W+FW+GPL+GG++A ++WE ILRP Q V  SA T + +
Sbjct:   32 EGVVKKRACQLGFVLLEERFD------SY-FFRAVLVEGLAMAAFLYNVITVIAYNDDGQLVGIDSDKQLLIALVFGLSIFMLVYFTAGLSGGNLNPAVTFSLVIGKRISVARGICYIASQMVGAIVGTAFALVIAGSDKFNAVNGGANILAVGVSAGQALFAEILSTAMVCLAVIIGLSSELWHLMEKTGMDILLPIAVGTAIVLAHMVLIPIDGCSVNPARSFGAAVISGEWADMWIFWVGPLIGGLVAILLWELILRPPQEVSRSAHTRRSS 299          
BLAST of mRNA_F-distichus_contig984.19276.1 vs. uniprot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 n=16 Tax=cellular organisms TaxID=131567 RepID=PIP27_ORYSJ)

HSP 1 Score: 182 bits (463), Expect = 4.810e-49
Identity = 99/236 (41.95%), Postives = 145/236 (61.44%), Query Frame = 1
Query:  256 YNMFRAAFAEYVGMLIFLF-NVITVARLAGRRDWEDEASASIIL-IALEFGLSIFTLIYILAQASGAHLNPAVSLGLLVGKRISVEKFVIYVIIQMFGAMTGASIATVFL----DSTGGGYNAINDGFIAANAFGGEVLCTFLLVLTVFAACDGELGRKDAFIGPLVPWAIGMAVLLAHLIMVPIDGCSINPARSFANAFTNNK---WEDHWVFWIGPLLGGVLATVMWEAILRPE 936
            ++++RA  AE++  LIFL+ ++ TV     +R   D  +    L +A  FG +IF L+Y     SG H+NPAV+LGL  G+++S+ + V+YV+ Q  GA+ GA I    +    D+ GGG N ++DG+ AA A G E++ TF+LV TVF+A D +   +D+FI  LVP  IG AV + HL  +PI G  INPARS   A   N+   W+DHW+FW+GP++G  LA    + +LR E
Sbjct:   40 WSLYRALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAAAYHKLVLRGE 275          
BLAST of mRNA_F-distichus_contig984.19276.1 vs. uniprot
Match: A0A8J9WPI2_9CHLO (Aquaporin PIP2-5 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WPI2_9CHLO)

HSP 1 Score: 182 bits (463), Expect = 8.860e-49
Identity = 107/245 (43.67%), Postives = 141/245 (57.55%), Query Frame = 1
Query:  262 MFRAAFAEYVGMLIFLFNVI-TV---------ARLAGRRDWEDEA--------SASIILIALEFGLSIFTLIYILAQASGAHLNPAVSLGLLVGKRISVEKFVIYVIIQMFGAMTGA----SIATVFLDSTGGGYNAINDGFIAANAFGGEVLCTFLLVLTVFAACDGELGRKDAFIGPLVPWAIGMAVLLAHLIMVPIDGCSINPARSFANAFTNNKWEDHWVFWIGPLLGGVLATVMWEAILR 930
            +F+A  AEY    +FLF  I TV         A LAG     + A        + +++ IA+ FG SIF L+Y  A  SG H+NPAV+ G+LV ++ISV + V+Y++ Q  GA TGA    +I T    + GGG NA++ G   A  +G E + T  LV TVFAA D E     A +  L P+AIGM V L HL+ +P+DGCSINPARSF  A    KW+D WVFW+GPL G V+A   +E   R
Sbjct:   21 LFKAVVAEYAVTTLFLFFTIGTVSSNCHTADNASLAGADKSLESAGYGTCFLGTGNVLNIAMAFGFSIFVLVYCAASFSGGHINPAVTFGMLVARKISVSRAVLYIVAQCLGACTGAGLVKAIDTHGWRAAGGGTNALSAGVNNAAGWGLETILTMALVFTVFAATDAERASDTAHLPVLAPFAIGMVVFLCHLVAIPLDGCSINPARSFGAAAVAGKWDDQWVFWVGPLCGAVMAATAYELFFR 265          
BLAST of mRNA_F-distichus_contig984.19276.1 vs. uniprot
Match: I0ZAA7_COCSC (Plasma membrane intrinsic protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0ZAA7_COCSC)

HSP 1 Score: 181 bits (458), Expect = 4.680e-48
Identity = 102/245 (41.63%), Postives = 137/245 (55.92%), Query Frame = 1
Query:  268 RAAFAEYVGMLIFLFNVITVARLAGRRDWEDEASAS--------------------IILIALEFGLSIFTLIYILAQASGAHLNPAVSLGLLVGKRISVEKFVIYVIIQMFGAMTGASIATVFLD----STGGGYNAINDGFIAANAFGGEVLCTFLLVLTVFAACDGELGRKDAFIGPLVPWAIGMAVLLAHLIMVPIDGCSINPARSFANAFTNNKWEDHWVFWIGPLLGGVLATVMWEAILR 930
            +A  AEY    +FLF   T+  ++      D AS S                    ++ IA+ FG SIF L+Y  A  SG H+NPAV+ G+ V ++ISV + V+Y++ Q  GA TGA +     D    + GGG NA++ GF  A  +G E + T  LV TVFAA D E     A +  L P+AIGM V L HL+ +P+DGCSINPARSF  A  +  W++ WVFW+GPL G VLA  ++E I R
Sbjct:   24 KAVVAEYAVTTMFLF--FTIGTVSSNCHTLDNASRSGADKSLDSAGFGTCFLGTSNVLNIAIAFGFSIFVLVYCAASFSGGHINPAVTFGMFVARKISVLRAVLYMVAQCLGACTGAGLVRAIDDDGWRAAGGGANALSPGFGEAAGWGLETILTMALVFTVFAATDSERATDTAHLPVLAPFAIGMVVFLCHLVAIPLDGCSINPARSFGAAAVSGSWDNQWVFWVGPLSGAVLAAAIYELIFR 266          
BLAST of mRNA_F-distichus_contig984.19276.1 vs. uniprot
Match: UPI0010A3BC1F (aquaporin PIP2-7-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A3BC1F)

HSP 1 Score: 179 bits (455), Expect = 5.750e-48
Identity = 96/239 (40.17%), Postives = 145/239 (60.67%), Query Frame = 1
Query:  256 YNMFRAAFAEYVGMLIFLFNVITVARLAGRRDWEDEAS-------ASIILIALEFGLSIFTLIYILAQASGAHLNPAVSLGLLVGKRISVEKFVIYVIIQMFGAMTGASIA----TVFLDSTGGGYNAINDGFIAANAFGGEVLCTFLLVLTVFAACDGELGRKDAFIGPLVPWAIGMAVLLAHLIMVPIDGCSINPARSFANA--FTNNK-WEDHWVFWIGPLLGGVLATVMWEAILR 930
            ++++RA  AE+V  L+FL+  ITV  + G ++     +         I+ IA  FG  IF L+Y  A  SG H+NPAV+ GL VG+++S+ + V+Y++ QM GA+ G  +A    T + D  GGG N++ +G+    A G E++ TF+LV TVF+A D +   +D+ +  L P  IG AV + HL  +P+ G  INPARSF  A  + N+K W+DHW+FW+GP++G   A +  E ILR
Sbjct:   35 WSLYRAVIAEFVATLLFLY--ITVLTIIGYKNQTSGTTPEAQCEGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFVGRKVSLIRAVLYILAQMAGAICGTGLAKGFQTAYYDRYGGGANSVQEGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIYNNDKIWDDHWIFWVGPIIGAAAAAIYHEHILR 271          
BLAST of mRNA_F-distichus_contig984.19276.1 vs. uniprot
Match: UPI0019010D6C (probable aquaporin PIP1-4 n=1 Tax=Benincasa hispida TaxID=102211 RepID=UPI0019010D6C)

HSP 1 Score: 179 bits (453), Expect = 1.110e-47
Identity = 98/234 (41.88%), Postives = 140/234 (59.83%), Query Frame = 1
Query:  253 SYNMFRAAFAEYVGMLIFLF-NVITVARLAGRRDWEDEASASIILIALEFGLSIFTLIYILAQASGAHLNPAVSLGLLVGKRISVEKFVIYVIIQMFGAMTGASIATVF----LDSTGGGYNAINDGFIAANAFGGEVLCTFLLVLTVFAACDGELGRKDAFIGPLVPWAIGMAVLLAHLIMVPIDGCSINPARSFANAFTNNK---WEDHWVFWIGPLLGGVLATVMWEAILR 930
            S++ +RA  AE+VG L+FL+ +V+T+  +A   +      A    IA  FG  IF L+Y  A  SG H+NPAV+ GLL+G+++S+ + V Y+I+Q  GA+ GA++   F     +  GGG N +N G+    A G E++ TFLLV TVF+A D +   +D+ +  L P  IG AV L HL  +PI G  INPARS   A   N+   W DHWVFW GPL+G  LA +  + ++R
Sbjct:   47 SWSFYRAGIAEFVGSLLFLYVSVLTIMGVARAPNKCSTVGAQ--GIAWAFGGIIFVLVYCTAGISGGHINPAVTFGLLLGRKLSLTRAVFYIIMQCLGAICGAAVVKSFENGPFERLGGGANTVNGGYSTTAALGSEIVGTFLLVYTVFSATDAKRNARDSHVPMLAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNRHQGWHDHWVFWAGPLIGAALAALYHQTVIR 278          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig984.19276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIW5_9PHAE2.510e-10162.55Aqp protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A6H5JZJ3_9PHAE6.140e-10061.65Aqp protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LTV4_ECTSI1.150e-8555.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YY46_9STRA9.430e-5940.21Aquaporin n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
A0A836CE69_9STRA3.620e-5041.82Transmembrane channel protein n=1 Tax=Tribonema mi... [more]
PIP27_ORYSJ4.810e-4941.95Probable aquaporin PIP2-7 n=16 Tax=cellular organi... [more]
A0A8J9WPI2_9CHLO8.860e-4943.67Aquaporin PIP2-5 n=1 Tax=Coccomyxa sp. Obi TaxID=2... [more]
I0ZAA7_COCSC4.680e-4841.63Plasma membrane intrinsic protein n=1 Tax=Coccomyx... [more]
UPI0010A3BC1F5.750e-4840.17aquaporin PIP2-7-like n=1 Tax=Prosopis alba TaxID=... [more]
UPI0019010D6C1.110e-4741.88probable aquaporin PIP1-4 n=1 Tax=Benincasa hispid... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig984contigF-distichus_contig984:7896..19828 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score328.9
Seed ortholog evalue2.4e-87
Seed eggNOG ortholog2880.D8LTV5
Preferred nameMIP
KEGG koko:K09863,ko:K09864,ko:K09865,ko:K09866,ko:K09867,ko:K09868,ko:K09872
KEGG TC1.A.8,1.A.8.11,1.A.8.8
KEGG Pathwayko04924,ko04962,ko04964,ko04970,ko04976,map04924,map04962,map04964,map04970,map04976
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000302,GO:0000323,GO:0001101,GO:0001568,GO:0001654,GO:0001655,GO:0001656,GO:0001666,GO:0001822,GO:0001944,GO:0002088,GO:0002237,GO:0002790,GO:0003008,GO:0003014,GO:0003091,GO:0003094,GO:0003097,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003779,GO:0005102,GO:0005198,GO:0005212,GO:0005215,GO:0005216,GO:0005217,GO:0005221,GO:0005223,GO:0005253,GO:0005261,GO:0005267,GO:0005326,GO:0005372,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005739,GO:0005764,GO:0005768,GO:0005769,GO:0005773,GO:0005783,GO:0005791,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0005887,GO:0005901,GO:0005902,GO:0005903,GO:0005911,GO:0006139,GO:0006163,GO:0006164,GO:0006182,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006820,GO:0006833,GO:0006836,GO:0006855,GO:0006869,GO:0006884,GO:0006915,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0006996,GO:0007010,GO:0007015,GO:0007154,GO:0007163,GO:0007267,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007565,GO:0007568,GO:0007586,GO:0007588,GO:0007589,GO:0007600,GO:0007601,GO:0008092,GO:0008150,GO:0008152,GO:0008154,GO:0008219,GO:0008284,GO:0008324,GO:0008361,GO:0008509,GO:0008519,GO:0008643,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009314,GO:0009410,GO:0009411,GO:0009414,GO:0009415,GO:0009416,GO:0009506,GO:0009507,GO:0009526,GO:0009536,GO:0009605,GO:0009607,GO:0009611,GO:0009612,GO:0009617,GO:0009624,GO:0009628,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009887,GO:0009888,GO:0009892,GO:0009914,GO:0009925,GO:0009941,GO:0009987,GO:0009991,GO:0010008,GO:0010015,GO:0010033,GO:0010035,GO:0010038,GO:0010053,GO:0010054,GO:0010226,GO:0010243,GO:0010256,GO:0010466,GO:0010496,GO:0010591,GO:0010592,GO:0010605,GO:0010632,GO:0010634,GO:0010817,GO:0010876,GO:0010941,GO:0010951,GO:0010959,GO:0012501,GO:0012505,GO:0012506,GO:0014070,GO:0014074,GO:0015075,GO:0015077,GO:0015079,GO:0015103,GO:0015112,GO:0015144,GO:0015166,GO:0015168,GO:0015238,GO:0015250,GO:0015267,GO:0015276,GO:0015318,GO:0015669,GO:0015670,GO:0015672,GO:0015696,GO:0015698,GO:0015701,GO:0015706,GO:0015711,GO:0015718,GO:0015721,GO:0015722,GO:0015791,GO:0015793,GO:0015833,GO:0015849,GO:0015850,GO:0015893,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016050,GO:0016323,GO:0016324,GO:0018130,GO:0018995,GO:0019222,GO:0019233,GO:0019438,GO:0019637,GO:0019693,GO:0019725,GO:0019755,GO:0019899,GO:0019904,GO:0020003,GO:0021537,GO:0021591,GO:0021670,GO:0021700,GO:0022411,GO:0022414,GO:0022600,GO:0022603,GO:0022607,GO:0022622,GO:0022803,GO:0022834,GO:0022836,GO:0022838,GO:0022839,GO:0022857,GO:0022890,GO:0023052,GO:0023061,GO:0030001,GO:0030029,GO:0030036,GO:0030042,GO:0030054,GO:0030072,GO:0030104,GO:0030133,GO:0030135,GO:0030136,GO:0030141,GO:0030154,GO:0030155,GO:0030157,GO:0030162,GO:0030165,GO:0030184,GO:0030185,GO:0030334,GO:0030335,GO:0030424,GO:0030430,GO:0030658,GO:0030659,GO:0030667,GO:0030900,GO:0030950,GO:0030952,GO:0031045,GO:0031090,GO:0031224,GO:0031225,GO:0031226,GO:0031253,GO:0031300,GO:0031301,GO:0031302,GO:0031303,GO:0031323,GO:0031324,GO:0031344,GO:0031346,GO:0031410,GO:0031526,GO:0031625,GO:0031667,GO:0031668,GO:0031960,GO:0031965,GO:0031967,GO:0031975,GO:0031982,GO:0031984,GO:0032127,GO:0032268,GO:0032269,GO:0032496,GO:0032501,GO:0032502,GO:0032526,GO:0032535,GO:0032809,GO:0032835,GO:0032870,GO:0032879,GO:0032940,GO:0032941,GO:0032984,GO:0032991,GO:0033036,GO:0033267,GO:0033326,GO:0033363,GO:0033554,GO:0033643,GO:0033646,GO:0033655,GO:0033762,GO:0033993,GO:0034219,GO:0034220,GO:0034599,GO:0034614,GO:0034641,GO:0034644,GO:0034654,GO:0035295,GO:0035377,GO:0035378,GO:0035379,GO:0035690,GO:0035821,GO:0036293,GO:0036294,GO:0036477,GO:0040007,GO:0040012,GO:0040017,GO:0042044,GO:0042045,GO:0042060,GO:0042127,GO:0042221,GO:0042383,GO:0042476,GO:0042493,GO:0042538,GO:0042542,GO:0042592,GO:0042594,GO:0042631,GO:0042802,GO:0042886,GO:0042891,GO:0042981,GO:0042995,GO:0043005,GO:0043010,GO:0043025,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043230,GO:0043231,GO:0043269,GO:0043270,GO:0043281,GO:0043434,GO:0043624,GO:0043627,GO:0043656,GO:0043657,GO:0043679,GO:0043855,GO:0043933,GO:0044057,GO:0044058,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044241,GO:0044249,GO:0044271,GO:0044281,GO:0044297,GO:0044298,GO:0044306,GO:0044389,GO:0044403,GO:0044419,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044433,GO:0044434,GO:0044435,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0044853,GO:0045121,GO:0045177,GO:0045178,GO:0045202,GO:0045765,GO:0045766,GO:0045785,GO:0045861,GO:0046068,GO:0046390,GO:0046483,GO:0046541,GO:0046658,GO:0046677,GO:0046683,GO:0046688,GO:0046689,GO:0046691,GO:0046717,GO:0046873,GO:0046875,GO:0046877,GO:0046878,GO:0046879,GO:0046903,GO:0046942,GO:0048145,GO:0048146,GO:0048364,GO:0048468,GO:0048469,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048588,GO:0048589,GO:0048592,GO:0048593,GO:0048731,GO:0048764,GO:0048765,GO:0048767,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050878,GO:0050886,GO:0050891,GO:0050896,GO:0050953,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051179,GO:0051181,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051259,GO:0051260,GO:0051261,GO:0051262,GO:0051270,GO:0051272,GO:0051289,GO:0051290,GO:0051291,GO:0051336,GO:0051346,GO:0051384,GO:0051458,GO:0051591,GO:0051592,GO:0051702,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0051851,GO:0051924,GO:0051928,GO:0052547,GO:0052548,GO:0052652,GO:0055037,GO:0055038,GO:0055044,GO:0055085,GO:0055086,GO:0060255,GO:0060322,GO:0060429,GO:0060456,GO:0060491,GO:0060548,GO:0060560,GO:0060986,GO:0061326,GO:0061437,GO:0061440,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0065010,GO:0070062,GO:0070293,GO:0070295,GO:0070301,GO:0070382,GO:0070482,GO:0070633,GO:0070887,GO:0071214,GO:0071229,GO:0071236,GO:0071241,GO:0071248,GO:0071260,GO:0071280,GO:0071288,GO:0071300,GO:0071310,GO:0071320,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071453,GO:0071456,GO:0071462,GO:0071466,GO:0071470,GO:0071472,GO:0071474,GO:0071478,GO:0071482,GO:0071495,GO:0071496,GO:0071548,GO:0071549,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071731,GO:0071732,GO:0071804,GO:0071805,GO:0071840,GO:0071944,GO:0072001,GO:0072006,GO:0072009,GO:0072012,GO:0072014,GO:0072019,GO:0072020,GO:0072022,GO:0072032,GO:0072044,GO:0072070,GO:0072073,GO:0072080,GO:0072170,GO:0072205,GO:0072207,GO:0072210,GO:0072220,GO:0072224,GO:0072229,GO:0072230,GO:0072232,GO:0072234,GO:0072236,GO:0072237,GO:0072239,GO:0072243,GO:0072358,GO:0072359,GO:0072488,GO:0072521,GO:0072522,GO:0080090,GO:0080147,GO:0080170,GO:0085018,GO:0090066,GO:0090407,GO:0090558,GO:0090596,GO:0090627,GO:0097159,GO:0097205,GO:0097237,GO:0097305,GO:0097327,GO:0097366,GO:0097435,GO:0097458,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:0098791,GO:0098793,GO:0098805,GO:0098857,GO:0098858,GO:0098862,GO:0099094,GO:0099402,GO:0099503,GO:0104004,GO:0120025,GO:0120032,GO:0120034,GO:0120035,GO:0120038,GO:0150034,GO:1901135,GO:1901137,GO:1901293,GO:1901342,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901618,GO:1901652,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170,GO:1902743,GO:1902745,GO:1903561,GO:1904018,GO:1905392,GO:1990349,GO:2000026,GO:2000116,GO:2000117,GO:2000145,GO:2000147
EggNOG free text desc.water channel activity
EggNOG OGsCOG0580@1,KOG0223@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04147
Exons9
Model size1970
Cds size885
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931163.4742458-UTR-F-distichus_contig984:7895..88121622931163.4742458-UTR-F-distichus_contig984:7895..8812Fucus distichus monoicousUTRF-distichus_contig984 7896..8812 -
1690886185.8770354-UTR-F-distichus_contig984:7895..88121690886185.8770354-UTR-F-distichus_contig984:7895..8812Fucus distichus monoicousUTRF-distichus_contig984 7896..8812 -
1622931163.6751485-UTR-F-distichus_contig984:14777..148931622931163.6751485-UTR-F-distichus_contig984:14777..14893Fucus distichus monoicousUTRF-distichus_contig984 14778..14893 -
1690886185.990182-UTR-F-distichus_contig984:14777..148931690886185.990182-UTR-F-distichus_contig984:14777..14893Fucus distichus monoicousUTRF-distichus_contig984 14778..14893 -
1622931163.6926804-UTR-F-distichus_contig984:19776..198281622931163.6926804-UTR-F-distichus_contig984:19776..19828Fucus distichus monoicousUTRF-distichus_contig984 19777..19828 -
1690886186.0031822-UTR-F-distichus_contig984:19776..198281690886186.0031822-UTR-F-distichus_contig984:19776..19828Fucus distichus monoicousUTRF-distichus_contig984 19777..19828 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931163.4940882-CDS-F-distichus_contig984:8812..90021622931163.4940882-CDS-F-distichus_contig984:8812..9002Fucus distichus monoicousCDSF-distichus_contig984 8813..9002 -
1690886185.898905-CDS-F-distichus_contig984:8812..90021690886185.898905-CDS-F-distichus_contig984:8812..9002Fucus distichus monoicousCDSF-distichus_contig984 8813..9002 -
1622931163.5159087-CDS-F-distichus_contig984:9223..93171622931163.5159087-CDS-F-distichus_contig984:9223..9317Fucus distichus monoicousCDSF-distichus_contig984 9224..9317 -
1690886185.908511-CDS-F-distichus_contig984:9223..93171690886185.908511-CDS-F-distichus_contig984:9223..9317Fucus distichus monoicousCDSF-distichus_contig984 9224..9317 -
1622931163.5465202-CDS-F-distichus_contig984:9600..97451622931163.5465202-CDS-F-distichus_contig984:9600..9745Fucus distichus monoicousCDSF-distichus_contig984 9601..9745 -
1690886185.9216893-CDS-F-distichus_contig984:9600..97451690886185.9216893-CDS-F-distichus_contig984:9600..9745Fucus distichus monoicousCDSF-distichus_contig984 9601..9745 -
1622931163.5622048-CDS-F-distichus_contig984:10361..104511622931163.5622048-CDS-F-distichus_contig984:10361..10451Fucus distichus monoicousCDSF-distichus_contig984 10362..10451 -
1690886185.9318874-CDS-F-distichus_contig984:10361..104511690886185.9318874-CDS-F-distichus_contig984:10361..10451Fucus distichus monoicousCDSF-distichus_contig984 10362..10451 -
1622931163.5836117-CDS-F-distichus_contig984:11087..111991622931163.5836117-CDS-F-distichus_contig984:11087..11199Fucus distichus monoicousCDSF-distichus_contig984 11088..11199 -
1690886185.9467034-CDS-F-distichus_contig984:11087..111991690886185.9467034-CDS-F-distichus_contig984:11087..11199Fucus distichus monoicousCDSF-distichus_contig984 11088..11199 -
1622931163.6033995-CDS-F-distichus_contig984:12204..123101622931163.6033995-CDS-F-distichus_contig984:12204..12310Fucus distichus monoicousCDSF-distichus_contig984 12205..12310 -
1690886185.9574857-CDS-F-distichus_contig984:12204..123101690886185.9574857-CDS-F-distichus_contig984:12204..12310Fucus distichus monoicousCDSF-distichus_contig984 12205..12310 -
1622931163.6283185-CDS-F-distichus_contig984:13906..140421622931163.6283185-CDS-F-distichus_contig984:13906..14042Fucus distichus monoicousCDSF-distichus_contig984 13907..14042 -
1690886185.9687927-CDS-F-distichus_contig984:13906..140421690886185.9687927-CDS-F-distichus_contig984:13906..14042Fucus distichus monoicousCDSF-distichus_contig984 13907..14042 -
1622931163.652256-CDS-F-distichus_contig984:14765..147771622931163.652256-CDS-F-distichus_contig984:14765..14777Fucus distichus monoicousCDSF-distichus_contig984 14766..14777 -
1690886185.979958-CDS-F-distichus_contig984:14765..147771690886185.979958-CDS-F-distichus_contig984:14765..14777Fucus distichus monoicousCDSF-distichus_contig984 14766..14777 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig984.19276.1prot_F-distichus_contig984.19276.1Fucus distichus monoicouspolypeptideF-distichus_contig984 8813..14777 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig984.19276.1

>prot_F-distichus_contig984.19276.1 ID=prot_F-distichus_contig984.19276.1|Name=mRNA_F-distichus_contig984.19276.1|organism=Fucus distichus monoicous|type=polypeptide|length=295bp
MEETVYARKFELGIVFEGQQQDGKNRIFSYNMFRAAFAEYVGMLIFLFNV
ITVARLAGRRDWEDEASASIILIALEFGLSIFTLIYILAQASGAHLNPAV
SLGLLVGKRISVEKFVIYVIIQMFGAMTGASIATVFLDSTGGGYNAINDG
FIAANAFGGEVLCTFLLVLTVFAACDGELGRKDAFIGPLVPWAIGMAVLL
AHLIMVPIDGCSINPARSFANAFTNNKWEDHWVFWIGPLLGGVLATVMWE
AILRPEQPVHSASTEKQAAPIVPTDTSVAPITIHGEFPEGAQLV*
back to top

mRNA from alignment at F-distichus_contig984:7896..19828-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig984.19276.1 ID=mRNA_F-distichus_contig984.19276.1|Name=mRNA_F-distichus_contig984.19276.1|organism=Fucus distichus monoicous|type=mRNA|length=11933bp|location=Sequence derived from alignment at F-distichus_contig984:7896..19828- (Fucus distichus monoicous)
GCAGAGTAAATCGTGACCCACTTCTGAGAGCGGAACTAAGGATCTTCAAA AGGTAAGAGAGTGGACAACTTTACCATACTTTACCGACCGAATGAACTAT TCGCGTGGTGAATCCCGTGCCTGAGTACTATACTTACTCGAAAAATGAAA AGGGAGAAGAGAGATAAAACATTCGGCCGGGTCGAACGTTTCAAACAGAT CGGCCCTCCTCTAAATCCCCTTTCTGTCGGGTACACACATCATCATTTGT TTAGCTCTCCTCTATCTAAGCGAAGACGTGGAAGGGACTAAACGATTGAT CCTCCTGCGGTTTAAATAAGGAGGGAGACACGTTCGGCGCAAAATTTGCG AGGCTACCACCGAAGCTTTTCAGGGTGCGACCAGAGAAGTCGCTTTTTCG ATTACTTTGGTAAACCATGCCCCCCTTATTACTAATAGTTACCGTTGTAT AGTAGTAATGGATGACCAAACTTTGTTGCAGGAAGTGAATCGGAAACAAA CGAGGAAGTCTCACCTCCCTGGCCTGCAATGAGGTTCCTTACAAAGTCAG TCACTTGGATCGGAAGACCGTCTGACCGAAGGCAACCCGACGACAGAAAC GAAGTAAACATGTATTATAAACGGGTACATACTTGTCTCGTAGCACCCTT AAAGATCCAGTCGCAGAATACGTACCAGGCCAGATCAGCATTTTTTTGTG GTTCAACTGTTGGCTCTAATGTATTACTGCTATGGAGTGTACCGTAGCGC TTTTTGAAATAATAGATGAACTGGTGCAAATGGGGCATCTTGGGCGGCTA ATTTCATTGGAGCGGTTGTTCGTGGGACGGAGACGCGACCATTAACTTCT TCTATTTATTTCGATACCACGTCGATCCCTATGCTAAAAACATTAACAAT ATGTAATAAGCATGGACTAAGCAGGCCCGTTCGATACAGTGGTAGGATGA TTAGGCATGGTTTTGGTGAATTTGACACGCAGCACGTGAAGTGTGTCTAG CTCTGCCCCAAAACGATCTACGACTACTGCTACTACGGTTATGTCGACCA ACCGTGGTAGTTGTAGGGCAATCATAGCATTTCTACGACATAAATACTTG TGGTTGTTAGGTGATGCTAGATATTTGACCAATGCAGCATATAACTAGAC CACCACCTGCTTGGAAATCAAACGACTCTTGGCTTGATTGAGGTAATTCC ACCAACTATGTGTCACTGCAGAAGTATTGGTGTTGCCATGGTACCGAACT CATCCACGTGGACTTACTACATAGTAGTTCTGAAGCAGGTGCGCATTTAT ACGCCCCATCACGCCCCCCCCGCCCCCCGCTTCCATCACACCCACGCTGT TTTAAATTACACCCACTCCCATGCAACAATGCGTTCACTACTACTCCGAC GAGGGGTACGAGAGATGACGAACTTCGAAATATGCATATCACGCACTGTA CGACCTTGTGTAGATTAAGGGTTACGATGAGGCAAGGACGTCTGCCAGCA ATGCTTTACGGAGACATACGTGCATTGGGTAGTCACGGGTTTGCCTTCTT CCGGGTTCTGTGCGAACAACGAGTTTTATGGTAGGTCACACAATGGTCCC GACAAATACCTCTTCACTCGGCGGATAAAGACATCATCAGTAAATACACA GCGTGCGCCATGGCAAAATGAATCTTGTGTCACGCAACATGCCTCCGGAG CTACAGTACAACTGGCCACTACAAATAGCACGGTCGGTAGCTAGCTCGAG CACATGCCTGGGCAGCAGTATTAGTACGTACTGACTATATTGCCATTAGG CCAAATGTATGGAAAATGTCTGGAACGTTTCTGTCGCATTTATATCATGT ACGTGTATGTATATATATCTGGTCACACATATAGGAAGAGTACGGATCAA CCGGGTAAGGTTGCCAATCCTGCACGTGGTCACCTGAACAGGAAAAATGA ATATATGAAGATGATATTTCACTGTCCGCGTTCGCGCCTGAGAATTTGGT CTCGCGAGACGGGTTCGGCAGCATACCTAGTAGCAATTATTCACATGTCT TGTTTTTCGAAAAACCTAACGAGAGAATCCGAACAAGATTACTTCAATTT ATCACCGGATGTACTACAATTAATATTATTAAAGAAGAAAGAACTCAGCG CAACTACCCTAGATTTCTACGTAGCGATGGCTTTAGATGACCATTAGCTG CACTCTCTGTGCTACGGAAGATAATAAGTGCATAATGAAAATATGATCCT AGATTAACCATACCCTGCAAGTATATCGCTGGTATGTTGTTTCGTACTCG CTGGGCTTCTTGGAATTGACCTAATCACTATAATAGCAATTACCGATGAC TCAATTACAACGCAAAATCCCATCATGGTTTCAATCGATTAGTCTAAGCC CGCAGAGTGCTCAACTGGGAAAGGGAGGAGCGAACACTCCCCCACCACAA AGCATCTTCTAAATACAACATATAGGAATCATATGATCAAATACCATCAC AACGCTCGCGCGACTAGGCTCGAGTTTCGTGCTTCTTTCCCATGAAGAAG GCGACATTTTTATTATTATTACGGTGTAGTAAGAAATTATAATCCGTACA TTCATGTTGGAAATTCTTGACCCTGGGCTAATCAAAGTAGAGAAGGATTG AATTGTGATTGGAGCGACGGCCTCGTCCAAAAGTAATTTCGCAAAAAGGT TGGACAATACATGGTGGGCATGATGCGCATACGTACGCCACGTGTTGGTG ATGATTGATTAATTGGAATTCGAGATTTCCCATCCTCCTGTGTTCTTGCA GTGTGTTCTACCAACCAATACTACAACAACAATGGTTTTTGGTTATCATG CTCTCTTCTGCCTATAATGTATTTGTTTTCGTCTGAGGAGTCACAATACA CGGCAATAATTCGTTCAACTACTAGAAGTGAGTCTGACTTTGTGTTCTAC GCACCTTTTAGTACGTAGTGTATGGTGTGTGTGTGTGTGTGTGTTGTGTA TATTCTTCAGATGAATCGATCGGGCCTCAACCATACCTAGTATATCTGAA GATGTTACTTTGCCCAGCCCCTCAGATCCGAAAGTAATGATCGATGGTTT AGCCCGTTGTCGGCATTCGTATTACTGTAGAAATCACATGTACAAGTACG TAATAAGTCGTCTGCTACCGGATCTGTGATGTTTGTTGTTCGTTGATCTT GTTTCATACTAGTATATGTTAGCATGTTTGCTTTTTGCTAGGACATGTAG CCTTTTCCTCGGTTAAGTTTGCTTTTCACAAGCCTCTCGTCTTTGAAGGA TGAAAGCTATGCTGGATTTCAGCAACAGGAAAGCTCAAGTTATCAACAAC AGGGATTTGTGCTGCCCAGGGGCAGTTTCATTAGTCATAAAACCATCTTG GGTCGATATAATGGACGAGCTTTTAATCATTGTAAGATTGAGGTCTACAA AAACACTGCCACAGATTTACCTCGGATTTACCATTTAGAGGCAAAGCACT CATATTTAAGCCCCGCGCTGCTGCGGTTAAAACGTCTACAACTTAGGCGA GTAAACAACACTACAGGCATTATTAAACCACTCTGTGTATATACTTGTTA GTTCTGCCCATACGTCCTGCAAGGTACCTGGTGCTTGTACCTAGCCTAGT ATGTTGGCAAAACCCCCGTGCCGGATGGATATTACAGCGGCGAAGCGGTG TTTGTAATTACAGATTTGTTTCGATCGGGATCAGTCTCGGTAATTCCTGC GCTAATAGGCTCCCAAATGACACATAATCTAACACTTGTTCCAAGCTAAA ATATATGTATGTTGTATGGTCACATAACATGCAGAAAAAAAAGGGGTCAA CCGGGTAAGGTTGCCAATCGTATTGGTGGTCAGCTGGACAAGAAAGAACA ATATTCCCTGTCCGCGTTCACGCCTGAGAATTTGGTCTCGCGAGACGGGT TCAGCCGTCCTGTCCCGCGTCATCTTGCTCATCTCCATACTCAGGCTGAA TCTGGTGCTTACTTACGGGATTCCTCCTGACATCCGCGGCGGGGTCCATT TCGTTATTTAAAACCTCCACACGCCATCGGGCCAGTCCCGAGTTGGTCGA GTCGCGCAATTGCGTACCAATGGCGTTAACTGCCGAGAATCCACCGGGAC AGGGCCAGTAAACCTCAAGGTAGTTCCGAACGAGTACTGCCTTGGCAGGT CACCATGGACCAATTGATATTGGCCTCTCTTTCCCACACCCGCTGTTAGT ATGACGTGGGCATGTTGAAAGTACGTACCGGCTGTCAGGGAAGAGAGATC AGAACCCGGGATATAAAATAGAGACACTTTATTTCTTGAAGACTCATTAA CTCAAGATACCAGCAGAGTTACAAGATCAAATCATAATGCATGTAACAGA TCGGGACATTGGACAGAGAGACGACAACAATTGTGTATAAAATACAGCAT GAAAATAAGAGTCCCAAAAAATATATGGAGTACTAATATTATTACAGTGG ACGAAAAATTCCTGCGACGAAGGAGGCAGCCATGGTTCGAAGCGGGTTAT CTTATACTTGGTAGATTGTTTCCACTTTTCATTACTGTCCATATATAGGG TAATACCTTATAGCTCTTGACTATGTCGCCCCTTCCCTTGAGGGCCTACT GGTTCGCTCTCCTTGTACATGTTTGGTGTCTTTTAATTTCTAATAATGTT GACAGAACTTTGCGTGATCGTACGAGTGCCAGCCATTTCGAACAGCACAT TAACACTACAAGTTTTAATGTTAGTTGATAACGCAGGAACATAGACATTG CTCAGCGGTCTTGGGGGGGAATATTTCAATAATCCTGCGTGTGAAAGTCG ATGGGATGGGGCTTCAGAAATATGACCGAAGTTGGTTACTCATTACTGTC CCCCACTTTCACTGACATGTCTGTCCGCTACAAAGGTCTGGAGCGAAATA CTGCTGCTTTATACATCACCACAGCATCACCACGTGTACCTTGCGCCGAT TCTGACGCCCTCAACTAACTGCTCAAGCGCGAACACGAACCCATCTTCAC TATGGAGGAGACGGTGAGCAAAGGAAGGCAGTTAAGCGAGGTTATAGCAA TTAAAAGGATTGCACTCGACCAAGTGTAGCTTTGCCCGAAAACGATACTT GGCGGCCAGTCATTAATCGTGACAATCATTGTGGAACCCTCTTTTATCGC CAGATGATCGATCTTGTTCAGGAAGCTCGTCCGTACTGTTTCTCTCTTCA TGCCGAACCCTCTGCTCGCGATATACGGAATCGCAACTTAACAGTGGGTC TACTCTATAGATTTAATACATGTCTTCCAGTATAAGTTATTCTAGCTTGC AACCGGATATCGTTAAGAAGTGACGGTAACTCTTCGAAAGCATGAAATAG GTGTAGGGGCCCGACGGCTGTCTTTGTCAGCCTCTTACGATCAGTAAATC ATTACTTCTTACTGTATCTACATCAGTACGGATAATTAATTTTATGTTGT TTTCCGTGGCAGGTTGACTATGTTTTTCTTGCGTCGTACACCCCTCTGGT ATTCTCCGTCAATTTCGCAAGACGGACTTGCCAATGGGAAAATATTCTTG AACCATTTATCACCCACTTACTTGTATCATGCATCAGTAATGCACCACAG AAAACAGGGTTAGCCATAAAACATCCGATACAGTAGTAGACACCCGAAAA ACATTGAGGACACTCTTGGTGAAAGCACCAAGCCTTATAGTAACTCTTTC TTTCTTTCCTCCCTTTTCCCGTGCCGCTCATTGCAGGTCTACGCTCGCAA GTTTGAGTTGGGCATTGTCTTCGAAGGGCAACAACAGGATGGGAAGAACC GTATTTTTAGCTACAACATGTTTCGAGCTGCATTCGCCGAATATGTGGGC ATGCTCATCTTCCTCTTCAACGGTAACGGATAGGCAGGCAAAGTCATCCT AACTTCGCGTACAGAATACTCCATCTTCTACGAACGATCGGATTAAACAT GTTACCTGTTTGTCTGGAAAGTGATGTCGTCGCAATTTATTTGTACGACA TTATTAATGCATCATGGAAAACTCGCTGATACAAATAAGACTCTATATTC AACCCCTGAGATGACTTGACCGCAATGGCTTGAATCAATTTTCGTTTCTA TGCAACGGAAGTTCTGGATTGCGCTCCGAATGGTTTCAGTAATATAGTTT AAGCTCAATTCGAAACAATCGCACCACATATTATACTCGTACCATGGCGA AGGTTTTAACAAGTGTACGCTATTTCATACATGACACTATCTTCATGCAT TATTATAAGGTTTAAAATCATTTAGAGGTTGCAAAACGCTTGATCAAATA ACAACACTCCAACCGCCGGAAACGTTTAACCCTCCGAAGAGTGTAACTGA CTTCTATGGGTGCCAACGGTTGGAAGCTTATGACTTCCTCCGCACTTTGA ACTACGTTTTCCTTCCATCGTACGATTCTAACGCCCACGACTTTCTAACG ATGACGGTTGTTGTAGTTCGCTCTGCGTTTGCAACTTTTTCAACATTACA GAAATTTCCCCAAACAATACACGTCATGAAAAAAGCTTAGAAATACACAA AATGATATAGGAACCATAGATAGGCTGGTGTCTGGCTTTTACTCGCGGGG TCAAGATTAGACGGGTGGAAACAGTCGATGCCAAGCCCAATAACTAACCT GAAGCTGGAGCTCTCTTCAAATATGTCTGTAGATCTTGAACGCCGATGGT CACGCCTGTTCGCCCTTGGCCAGATATTTTCCTTCAATACAAGCCCTCGG TCCTCGAGGCGCATAACCTGTCGGATGCACTGGATTCTCAGAGTTGGTGC AAGTTGCGGTCAAGTATACTCAGCATGTATGTGTAGAGTAAGGACATTTA ACATAATTTCTAAGAAGAATCTTTGAAGAAGAGCTGAGTCGATAGAAAGA GGTTACTGTTAGATTGATGACTGAACTGGGCAAATGTTGGAGGTTCTCAA CCCCCACCATTGGCATTTAACACGACCTGATCCTTATAAACTCTGGAATG TGCAATCATACTCTAAACCTTGCCTACCGCTCAAAGCCATTCAAAAGCAT TATTGCTTCCTTTAATGTTGCTACCTAAATCATGACGTTCAGGCTAACAA GTGACTTTGATCTCGCTGAGCAGTTTTCTATATCTGCCCAGGTGGTAAGC GTCTGATGGAACGTCTCCTATAAAGTCAATACTCCTGCAGAAAACTCACG GGGAATGGGAAAACTACGTTTTTTAACTTTATCGTCTGACATAAATTATT GTAGTGTTTTGATTTCTGGGGTTCCAGACGAAATCGATTTCTTGATGGAA GCAGGCCATTCTAAAAAATAGAACCGGTTCATGAATCTTCGAAGGTTATT ATGCCACCCCAACAAACCGGTTTCGCTTCTTTTCGTTCGCCTTCTTACAC CGCCGGGGGGGTGTTTTCTGTATCGTTCTCTGTTTCTGCGTCTGCCTATC TGGCCGCTGGTTTTGCAGTTATAACTGTGGCCCGCCTCGCTGGACGCAGG GATTGGGAAGACGAAGCTTCAGCCTCCATCATACTCATCGCCCTCGAGTT CGGGCTCTCCATCTTTACCCTCATGTGAGTATAGTTTACATTTTCATGGT GGCTCGTCTGATCGTCGCTTCTGTACATATGGCAACGCCGATTACCACGT TTTTTCTGGAAATGGAAGGTGGTGTTGTCAAAGCTATACATTCTCGTCTA TGAGAGGGCGCTGTGAGTTTCTTCTGTGATACGTACACGTGTATCGCTCT ACCGTTTAGATACCCTAATGGTTATGATTTTCACCTTATAGTACGGCAAG CTATGTTAGAAGTACACAACATTATAAAGTTGATATATTTTTATTAATAG TGCTCACACTGCAGGCGGAAAAAAAATGCTTGGGAATGAATAAAGCGTGT AGTCGCATTTTTGCCAAACGCGCTGTAAGCGTTCGAAAACGGGCAGTTCT ACGACGTTGATATATTTCAATCTTCTAAGACCTCTACGTTATACGCTGGC AAGCAAGTCGCTCTGTAAGAGGAATATTAGGGGCAACATTACCCCGGCAC GCGCCGGGGTTTTTCTACAGGAGAAATCAAACGCATGCAAGTTAGCCTAC TACGCCATTGTGTCTCGGAACCATTGTGCAGCATGATCGGTGACACAAAT TCGCAAAACGCTTGGGTTCCCCAATAACTAAATAAACGAAAGAAATGGCG GGACTACAACTTTCTAACCAGTAGAAGTATCATAGAAATAATGACATCGC GGGACTCTGTACCATGCGCGCACGGTACAAGCGTGTACCTATTTCATGAT TCAAAGTGTTGTGGCAACCTGAATATATCTAGATGGTCAAAGGTTTGGTT TTGGCTATAGTGTGGTCTGTCGCCCCCCGTGTTGTTGCTTTTATCTCCAC CATTTTCCCTTGCTGCTACCCTTCATTCGATTGAGTGAACCCGCTGGAAT CTCTCGGCGCAATGTTTGATAGAAATCATTATTGATTTGAGTATTTCAGC TACCGGCCCAAAAACGTTCTGAAGCATGACGACGGGTTGTTTCTCCCGCT ACTGCTCGTGTTTCGATCGATCACGACAGCTACATCTTGGCGCAGGCTTC GGGCGCCCATCTTAACCCGGCTGTCTCGCTTGGTCTTCTCGTGGGCAAGC GCATCTCCGTCGAGAAGTTCGTCATCTACGTCATTATTCAGGTAACTCCA TGTTTATTCTACGATAATTCATACTATTAATAGTTTCATTTCTTAGCTTC AAGGTCTGCACCCTCAACAGATGTCCGGTTAGGGTATAGCGAATTACTTC GTGCACACAATGCAAAACAGGTCATTTGGTTCTGGTACGACTTGTACAAC AGGTAGCTCCTCCGCCAAGGCAGCGTTTTTTTTTCGCGTTTGGGTTTCAA AACGAGCACTGGTATTTTCTTCCAGTGATTTGTCTCCTGAAGTGCGTTCG ACCCCTCTCGAGAAACTTTGAAATCACCCCGTAATATTTTCATTGATTCC TTAGTTGTCAATGGCGTAGCCTCCACATGTTCCAAAAACGTTTCGATCGG GCTAGGGAGGAGAAATGACTACAGCAGAACCAGCTTCGAATAGTTTGTAC GCACCTCAAATATCCAGTGCTTCGTCTTCACCGACCGATCGGCATGGATT AATAATAGTTATGCGCAACTTCATTTGATTGCCACAGTGATTGCGGACAG GAATGAAGAGTTTTTGCTTGTCGTAGGCATCGGCTTCGCCGACTATCATC CACACTTTAAAGTGCACGAGAGAGGCGCTTAACGCAGTCTGATATGTACC ACTGTTATACTACGCTTCGTGCTGAAGATGTTTGGTGCGATGACGGGCGC GAGCATCGCTACCGTATTCCTGGACTCAACTGGCGGGGGCTATAACGCTA TCAACGATGGCTTCATTGTGAGTATGCATATAACGTATTCCTCGAGCGCT GAAGTATGCGGAAGACTTCAATGAGCAATATTCCACGGCATCACAGCGTC CCAGATTTACCCCCGGTCTTCACCCGAAGTACAATCCCTCAGACCGGCGT TGATACATCGCTACTTGTAGGCGCGGAAGGTGTTGTTATACTTTTTACAC TAGGTATCCCTTGTGTGATTTCGAGCTATACCTCTTCGGCGTGCAGAAAA CGGTCAAATCTTCACCTTGTGAAATGAGCTTCCAGTAAAGTTTTAGTCAA AGGTCGACACTGATGACAACGGTCACTAGTGCTGACAAGCAGGGCGGCTT CGTTCCACATCCAACGGCGACACGAGGCACATCGCCTTTCAAGGCGAAGG TGGTCTATAATGCTGTCGACCAGACGCATGGATTCATCGTCCACTTGGCC ATATTTTTCATGTCTAGTTCCTGCAGGGACCTTATTTCTGCACGTAGTAA GTATAGTTTTCCTCCACTCTCGATAGTTACTTTACCGTAGCGTATACCGA GACGCGATTGGCCGCCTAAACGGAGCCCCTTACGCATTTTTCTCCTCCCC TCCCTTCCGCCTATTCTACGACCTCTCTCGCAGGCCGCTAATGCCTTCGG CGGCGAGGTTCTGTGTACATTCCTCTTGGTGCTGACTGTTTTTGCTGCTT GTGATGGAGAGCTTGGCCGGAAAGACGCCTTTATCGGGCCTCTCGTTCCG TGGGCCATTGGCATGGCCGTCCTTCTGGGTGAGTCAACTTACTTTTTGCA GACGTTGTCGATGTCGATGGTTTTTAAGTCACTTCTTGTGTAGTAGGACC GAGTCTTCGACTGTTCCCCTTTTGTTTTGGTTGGTATGACAACAACAGTA TTTGGTCGGGACGATGTCTGTCGACAACCATGCACGTTCACGGGGGGCAA CTGTTTCCCGTTGATAAGAGATTCGGCGTAATAAAGGAGTAAAAAATGTT TTTGATTGCTCCCGACTCTGACAACCCCCCTCCCCCCCCTTCCATGCGTT CTCTGTCGCAGCCCACCTAATCATGGTGCCCATTGACGGCTGCTCCATCA ATCCCGCGCGTTCTTTTGCAAATGCATTCACAAACAACAAATGGGAGGAC CACTGGTGAGCTAATGGGACAGCGATTTATGAACGTCCAAAAATAACGAG CAGTGTTGGTGGAGCTTCGAAGCATTGGGAGGGGGCAGTACTCTCAGTCG TGGCTTGGCATCACCCGAAGTAAATGCTAAAAACTGTGCAATGGACGAAT TCTGATCTCCGGGACCATTAACGATTTTTCACCAAACCCGTGTCCTCTCT TGCTGCATGGTACACGACTTGTGCAGGGTATTTTGGATCGGCCCACTGCT GGGAGGCGTCCTTGCCACAGTCATGTGGGAGGCCATCCTCCGCCCCGAAC AGCCTGTCCACTCCGCAAGCACCGAAAAGCAAGCCGCGCCAATTGTCCCT ACAGACACTTCTGTTGCCCCCATCACTATCCACGGAGAATTCCCTGAAGG AGCGCAGCTAGTGTAAAATGATGGAATTCGTGGCGCACAGTATACCGTAT CCTTGAACTGGCGTTTGAGGTTTCGATTTGGTTTGTGCACCAACCGTTAT AGACTGACAGCCAAAGTCTCAATCTTTGAGAAACGGTTACTCTGGCGAGG GAGGCATCGGCGTGTATAGGAAATATAGGACTAAAGAGGTTCGAAAAGGT CGTACTATATGTTATTGGTGGATCTCGAGTTCGTATATCACAAAATACAT ACATGTGTAAGAATGGATCTGCACTGAGGTTGGCGTTCATGTCTGTGGGG CGCTTGGACTCGCGGTGCACAAGTACACATAAATAATCATAAACTATTAA TAGTTTGAGAGTTTAGGTGCAAATGTCATACCGATGTGTATGCATGGCAA AGACCAGCCAACGCAATCAAGCATCAAGGAGGGAGATCTTCATAGTGTAT AGCGACGAGCAGAGCGAAGCTTCGATCTCATCTCGGGTGGTAAACAGTGG TTCTCATATTTTGCTTCGTCATGTTCGCTTGATGTATATTGTATGGGTTT TCCCAGTTGTTTATAGGGAACTTAGTGGTTGTTTGCTTGAGCAGGGAGAA TCACGTTGGGTACGTAGGAGTGAAATGCGATACGATTTAAGTAAAACTAG TATGCCAGGCGTACGATCTATTGTTTGGCATCGGACAGAAGTGAGCAGAT TTATGATTCCGGGGAAAAAAATACGGGTTAGGGAAAAAACTTCCTCCGGA AAAGAGATTTTATTACACATGCCAGTTAGCATGACATGTGATGTGAATAC TTTCACTCAATATGCGGAGACTTAAATTGTCAACATTCCAGCCATCGTTT AAGACACCACCTACAGATAAACAAGAAAGGAGGCGAATTACCATAAACGT CCCTTGTATGTGTTTACTAAATTGCACATAACC
back to top

Coding sequence (CDS) from alignment at F-distichus_contig984:7896..19828-

>mRNA_F-distichus_contig984.19276.1 ID=mRNA_F-distichus_contig984.19276.1|Name=mRNA_F-distichus_contig984.19276.1|organism=Fucus distichus monoicous|type=CDS|length=1770bp|location=Sequence derived from alignment at F-distichus_contig984:7896..19828- (Fucus distichus monoicous)
ATGGAGGAGACGATGGAGGAGACGGTCTACGCTCGCAAGTTTGAGTTGGG
CATTGTCTTCGAAGGGCAACAACAGGATGGGAAGAACCGTATTTTTAGCT
ACAACATGTTTCGAGCTGCATTCGCCGAATATGTGGGCATGCTCATCTTC
CTCTTCAACGGTCTACGCTCGCAAGTTTGAGTTGGGCATTGTCTTCGAAG
GGCAACAACAGGATGGGAAGAACCGTATTTTTAGCTACAACATGTTTCGA
GCTGCATTCGCCGAATATGTGGGCATGCTCATCTTCCTCTTCAACGTTAT
AACTGTGGCCCGCCTCGCTGGACGCAGGGATTGGGAAGACGAAGCTTCAG
CCTCCATCATACTCATCGCCCTCGAGTTCGGGCTCTCCATCTTTACCCTC
ATTTATAACTGTGGCCCGCCTCGCTGGACGCAGGGATTGGGAAGACGAAG
CTTCAGCCTCCATCATACTCATCGCCCTCGAGTTCGGGCTCTCCATCTTT
ACCCTCATCTACATCTTGGCGCAGGCTTCGGGCGCCCATCTTAACCCGGC
TGTCTCGCTTGGTCTTCTCGTGGGCAAGCGCATCTCCGTCGAGAAGTTCG
TCATCTACGTCATTATTCAGCTACATCTTGGCGCAGGCTTCGGGCGCCCA
TCTTAACCCGGCTGTCTCGCTTGGTCTTCTCGTGGGCAAGCGCATCTCCG
TCGAGAAGTTCGTCATCTACGTCATTATTCAGATGTTTGGTGCGATGACG
GGCGCGAGCATCGCTACCGTATTCCTGGACTCAACTGGCGGGGGCTATAA
CGCTATCAACGATGGCTTCATTATGTTTGGTGCGATGACGGGCGCGAGCA
TCGCTACCGTATTCCTGGACTCAACTGGCGGGGGCTATAACGCTATCAAC
GATGGCTTCATTGCCGCTAATGCCTTCGGCGGCGAGGTTCTGTGTACATT
CCTCTTGGTGCTGACTGTTTTTGCTGCTTGTGATGGAGAGCTTGGCCGGA
AAGACGCCTTTATCGGGCCTCTCGTTCCGTGGGCCATTGGCATGGCCGTC
CTTCTGGGCCGCTAATGCCTTCGGCGGCGAGGTTCTGTGTACATTCCTCT
TGGTGCTGACTGTTTTTGCTGCTTGTGATGGAGAGCTTGGCCGGAAAGAC
GCCTTTATCGGGCCTCTCGTTCCGTGGGCCATTGGCATGGCCGTCCTTCT
GGCCCACCTAATCATGGTGCCCATTGACGGCTGCTCCATCAATCCCGCGC
GTTCTTTTGCAAATGCATTCACAAACAACAAATGGGAGGACCACTGCCCA
CCTAATCATGGTGCCCATTGACGGCTGCTCCATCAATCCCGCGCGTTCTT
TTGCAAATGCATTCACAAACAACAAATGGGAGGACCACTGGGTATTTTGG
ATCGGCCCACTGCTGGGAGGCGTCCTTGCCACAGTCATGTGGGAGGCCAT
CCTCCGCCCCGAACAGCCTGTCCACTCCGCAAGCACCGAAAAGCAAGCCG
CGCCAATTGTCCCTACAGACACTTCTGTTGCCCCCATCACTATCCACGGA
GAATTCCCTGAAGGAGCGCAGCTAGTGTAAGGTATTTTGGATCGGCCCAC
TGCTGGGAGGCGTCCTTGCCACAGTCATGTGGGAGGCCATCCTCCGCCCC
GAACAGCCTGTCCACTCCGCAAGCACCGAAAAGCAAGCCGCGCCAATTGT
CCCTACAGACACTTCTGTTGCCCCCATCACTATCCACGGAGAATTCCCTG
AAGGAGCGCAGCTAGTGTAA
back to top