mRNA_F-distichus_contig9826.19264.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig9826.19264.1 vs. uniprot
Match: A0A6H5JEY2_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY2_9PHAE) HSP 1 Score: 187 bits (476), Expect = 1.310e-54 Identity = 87/121 (71.90%), Postives = 103/121 (85.12%), Query Frame = 3
Query: 3 VVACCNTTGSLMVPLAAISTAKSPPIFRHLSKSPTPYYAQPSAWLDSSICELWFHEVFVPFVKRTNGRKVALVWDNCSGHIIRNNDPK*ITINFLPPNVTSVYQPCDQGILHALECQYKTE 365
VVACCNTTGSL VPLA ISTAK+P +FRH+ +SP PYY+Q SAWLDS++C+ WF EVFVPFVK+T G+KV L+WDNC GH I+N+DP+ I I FLPPNVTSV+QP D GIL AL+CQYKTE
Sbjct: 174 VVACCNTTGSLKVPLAVISTAKNPMVFRHIRRSPIPYYSQQSAWLDSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQ-IIIIFLPPNVTSVFQPMDMGILFALKCQYKTE 293
BLAST of mRNA_F-distichus_contig9826.19264.1 vs. uniprot
Match: A0A6H5JV64_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV64_9PHAE) HSP 1 Score: 187 bits (476), Expect = 9.090e-54 Identity = 87/121 (71.90%), Postives = 103/121 (85.12%), Query Frame = 3
Query: 3 VVACCNTTGSLMVPLAAISTAKSPPIFRHLSKSPTPYYAQPSAWLDSSICELWFHEVFVPFVKRTNGRKVALVWDNCSGHIIRNNDPK*ITINFLPPNVTSVYQPCDQGILHALECQYKTE 365
VVACCNTTGSL VPLA ISTAK+P +FRH+ +SP PYY+Q SAWLDS++C+ WF EVFVPFVK+T G+KV L+WDNC GH I+N+DP+ I I FLPPNVTSV+QP D GIL AL+CQYKTE
Sbjct: 379 VVACCNTTGSLKVPLAVISTAKNPMVFRHIRRSPIPYYSQQSAWLDSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQ-IIIIFLPPNVTSVFQPMDMGILFALKCQYKTE 498
BLAST of mRNA_F-distichus_contig9826.19264.1 vs. uniprot
Match: A0A6H5JYC6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC6_9PHAE) HSP 1 Score: 179 bits (453), Expect = 6.970e-52 Identity = 84/120 (70.00%), Postives = 97/120 (80.83%), Query Frame = 3
Query: 3 VVACCNTTGSLMVPLAAISTAKSPPIFRHLSKSPTPYYAQPSAWLDSSICELWFHEVFVPFVKRTNGRKVALVWDNCSGHIIRNNDPK*ITINFLPPNVTSVYQPCDQGILHALECQYKT 362
VVACCNTTGSL VPLA I TAK P +FRH+ K P PYYAQ SAWLD+SIC+ WF EVFVPFVK G+KVAL+W+NC GH I+N+DP+ I I FLPP VTSV+QP D G+L AL+CQYKT
Sbjct: 341 VVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVKENTGKKVALLWNNCPGHEIKNDDPQ-IVIIFLPPKVTSVFQPMDMGVLFALKCQYKT 459
BLAST of mRNA_F-distichus_contig9826.19264.1 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE) HSP 1 Score: 173 bits (438), Expect = 8.570e-49 Identity = 84/124 (67.74%), Postives = 98/124 (79.03%), Query Frame = 3
Query: 3 VVACCNTTGSLMVP---LAAISTAKSPPIFRHLSKSPTPYYAQPSAWLDSSICELWFHEVFVPFVKRTNGRKVALVWDNCSGHIIRNNDPK*ITINFLPPNVTSVYQPCDQGILHALECQYKTE 365
VVACCNTTGSLMVP LA IST+K P +FRH+ K P PY+AQ SAWLD++IC+ WF EVFVPFVK +KVAL+WDNC GH I++NDP+ I I FLPPNV SVYQP + GIL L+CQYKTE
Sbjct: 208 VVACCNTTGSLMVPFXPLAVISTSKKPMVFRHVRKPPCPYFAQSSAWLDAAICQRWFDEVFVPFVKGKTSKKVALLWDNCPGHKIKSNDPQ-IVIIFLPPNVNSVYQPMNMGILFVLKCQYKTE 330
BLAST of mRNA_F-distichus_contig9826.19264.1 vs. uniprot
Match: A0A6H5KA74_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA74_9PHAE) HSP 1 Score: 173 bits (438), Expect = 3.790e-48 Identity = 84/123 (68.29%), Postives = 99/123 (80.49%), Query Frame = 3
Query: 3 VVACCNTTGSLMVPLAAISTAKSPPIFRHLSKSPTPY--YAQPSAWLDSSICELWFHEVFVPFVKRTNGRKVALVWDNCSGHIIRNNDPK*ITINFLPPNVTSVYQPCDQGILHALECQYKTE 365
VVACCNTTGSL VPLA I TAK P +FR + K PY YAQ SAWLDS++C+ WF EVFVPFVK+T G+K+AL+WDNC GH I+N+DP+ I I FLPPNVTSV+QP D GIL AL+CQYKT+
Sbjct: 458 VVACCNTTGSLKVPLAIIHTAKDPMVFRQVRKPACPYLYYAQKSAWLDSALCQRWFDEVFVPFVKKTTGKKMALLWDNCPGHRIKNDDPQ-IVIIFLPPNVTSVFQPMDMGILFALKCQYKTK 579
BLAST of mRNA_F-distichus_contig9826.19264.1 vs. uniprot
Match: A0A6H5JEK6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK6_9PHAE) HSP 1 Score: 168 bits (426), Expect = 3.690e-47 Identity = 81/121 (66.94%), Postives = 94/121 (77.69%), Query Frame = 3
Query: 3 VVACCNTTGSLMVPLAAISTAKSPPIFRHLSKSPTPYYAQPSAWLDSSICELWFHEVFVPFVKRTNGRKVALVWDNCSGHIIRNNDPK*ITINFLPPNVTSVYQPCDQGILHALECQYKTE 365
VV CCNTTGSLMVPLA IST+K+ IFRH+ K P PY+AQ SAWLD++IC+ WF EVFV FVK +KVAL+WDNC GH I +NDP+ I I FLPPNV SVYQP D GIL L+CQY+ E
Sbjct: 347 VVPCCNTTGSLMVPLAVISTSKNTMIFRHVRKPPCPYFAQESAWLDAAICQRWFDEVFVAFVKGKTSKKVALLWDNCPGHKINSNDPQ-IFIMFLPPNVISVYQPMDMGILFVLKCQYRNE 466
BLAST of mRNA_F-distichus_contig9826.19264.1 vs. uniprot
Match: A0A6H5KIE7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIE7_9PHAE) HSP 1 Score: 161 bits (408), Expect = 3.400e-46 Identity = 77/120 (64.17%), Postives = 93/120 (77.50%), Query Frame = 3
Query: 6 VACCNTTGSLMVPLAAISTAKSPPIFRHLSKSPTPYYAQPSAWLDSSICELWFHEVFVPFVKRTNGRKVALVWDNCSGHIIRNNDPK*ITINFLPPNVTSVYQPCDQGILHALECQYKTE 365
VACCNTTGSLMVP A IST+K +FRH+ K P Y+ Q SAWLD++IC+ WF +VFVPFVK +KVAL+WDNC GH I++NDP+ I I FLPP +TSVYQP D GIL L+C+YKTE
Sbjct: 10 VACCNTTGSLMVPFAVISTSKKTMVFRHVRKPPCSYFDQESAWLDAAICQ-WFDKVFVPFVKGKTSKKVALLWDNCPGHKIKSNDPQ-IVIIFLPPEITSVYQPMDMGILFVLKCRYKTE 127
BLAST of mRNA_F-distichus_contig9826.19264.1 vs. uniprot
Match: A0A6H5JV34_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV34_9PHAE) HSP 1 Score: 162 bits (411), Expect = 1.760e-45 Identity = 76/109 (69.72%), Postives = 88/109 (80.73%), Query Frame = 3
Query: 3 VVACCNTTGSLMVPLAAISTAKSPPIFRHLSKSPTPYYAQPSAWLDSSICELWFHEVFVPFVKRTNGRKVALVWDNCSGHIIRNNDPK*ITINFLPPNVTSVYQPCDQG 329
VV+CCNTTGSL VPLA I TAK P +FRH+ K PYYAQ S WLDSS+C+ WF EVFVPFVK+T G+KVAL+WDNC GH I+N+DP+ I I FLPPNVTSV+QP D G
Sbjct: 161 VVSCCNTTGSLKVPLAVIHTAKDPMVFRHVRKPACPYYAQKSGWLDSSLCQRWFDEVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQ-IVIIFLPPNVTSVFQPMDMG 268
BLAST of mRNA_F-distichus_contig9826.19264.1 vs. uniprot
Match: A0A6H5K051_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K051_9PHAE) HSP 1 Score: 149 bits (377), Expect = 1.090e-41 Identity = 76/121 (62.81%), Postives = 89/121 (73.55%), Query Frame = 3
Query: 3 VVACCNTTGSLMVPLAAISTAKSPPIFRHLSKSPTPYYAQPSAWLDSSICELWFHEVFVPFVKRTNGRKVALVWDNCSGHIIRNNDPK*ITINFLPPNVTSVYQPCDQGILHALECQYKTE 365
VVACCNT GSLMVPLA IST+K +FR + K P PY+AQ SAWLD++I + WF EVFVPFVK KVAL+WD GH I++NDP+ I + FLPPNV SVYQP GIL L+ QYKTE
Sbjct: 187 VVACCNTAGSLMVPLAVISTSKKRVVFRLVRKPPCPYFAQDSAWLDAAIYQRWFDEVFVPFVKGKTSTKVALLWDKGPGHKIKSNDPQ-IVVIFLPPNVPSVYQPMGMGILLVLKRQYKTE 306
BLAST of mRNA_F-distichus_contig9826.19264.1 vs. uniprot
Match: A0A6H5KQ75_9PHAE (HTH CENPB-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ75_9PHAE) HSP 1 Score: 149 bits (377), Expect = 8.650e-41 Identity = 72/121 (59.50%), Postives = 87/121 (71.90%), Query Frame = 3
Query: 3 VVACCNTTGSLMVPLAAISTAKSPPIFRHLSKSPTPYYAQPSAWLDSSICELWFHEVFVPFVKRTNGRKVALVWDNCSGHIIRNNDPK*ITINFLPPNVTSVYQPCDQGILHALECQYKTE 365
VVACCNTTGSL VPLA I TAK P +FRH+ K PYYA+ SAWLDS++C+ WF EVFVPFVK+T G+KVAL+WDNC GH I+N+DP+ P + GIL AL+CQYKT+
Sbjct: 325 VVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPACPYYARKSAWLDSALCQRWFDEVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQ---------------IPMNMGILFALKCQYKTD 430 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9826.19264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig9826.19264.1 >prot_F-distichus_contig9826.19264.1 ID=prot_F-distichus_contig9826.19264.1|Name=mRNA_F-distichus_contig9826.19264.1|organism=Fucus distichus monoicous|type=polypeptide|length=122bp RLSPAATRPARSWCRWPPSARRKARRFFDILANHQHPTTPSQAPGSIHLSback to top mRNA from alignment at F-distichus_contig9826:1121..1488- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig9826.19264.1 ID=mRNA_F-distichus_contig9826.19264.1|Name=mRNA_F-distichus_contig9826.19264.1|organism=Fucus distichus monoicous|type=mRNA|length=368bp|location=Sequence derived from alignment at F-distichus_contig9826:1121..1488- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig9826:1121..1488- >mRNA_F-distichus_contig9826.19264.1 ID=mRNA_F-distichus_contig9826.19264.1|Name=mRNA_F-distichus_contig9826.19264.1|organism=Fucus distichus monoicous|type=CDS|length=732bp|location=Sequence derived from alignment at F-distichus_contig9826:1121..1488- (Fucus distichus monoicous)back to top |