mRNA_F-distichus_contig98226.19260.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig98226.19260.1 vs. uniprot
Match: A0A6H5L6F7_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6F7_9PHAE) HSP 1 Score: 291 bits (745), Expect = 3.310e-89 Identity = 153/175 (87.43%), Postives = 165/175 (94.29%), Query Frame = 1
Query: 1 SNIYREKYKGIALCLGMLSTALAGTYVNFGVFTLYQDKALDSXXXXXXXXXLSVPLVDVNAFPKLCKAYFIFFEILFRNHIGAVVALDTPVFMRVMHSLHDGLQALDAPLASQCAATIDHLATFHFKNANKDSPAMLALKAHLALEPALLSGLMETLFNILLFESMSNNTANQWA 525
+N+YREKYKGIALCLGMLSTAL+GTYVNFGVFTLY DKALD+XXXXXXXXX SVPL DV A+PKLCKAYF+FFEILFRNHI VVALDTPVFMRVMH+LH+GLQ LDAPLASQCAATIDHLAT+HFKNA+KD+PAML LK HL+ EPALLSGLMETLFNILLFESMSNNTANQWA
Sbjct: 857 ANVYREKYKGIALCLGMLSTALSGTYVNFGVFTLYNDKALDNXXXXXXXXXXSVPLADVTAYPKLCKAYFVFFEILFRNHITVVVALDTPVFMRVMHALHEGLQGLDAPLASQCAATIDHLATYHFKNASKDTPAMLVLKGHLSREPALLSGLMETLFNILLFESMSNNTANQWA 1031
BLAST of mRNA_F-distichus_contig98226.19260.1 vs. uniprot
Match: A0A835YUW2_9STRA (RAN binding protein 16-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUW2_9STRA) HSP 1 Score: 198 bits (503), Expect = 1.520e-55 Identity = 98/167 (58.68%), Postives = 127/167 (76.05%), Query Frame = 1
Query: 25 KGIALCLGMLSTALAGTYVNFGVFTLYQDKALDSXXXXXXXXXLSVPLVDVNAFPKLCKAYFIFFEILFRNHIGAVVALDTPVFMRVMHSLHDGLQALDAPLASQCAATIDHLATFHFKNANKDSPAMLALKAHLALEPALLSGLMETLFNILLFESMSNNTANQWA 525
+G ALC+ L+TALAG YVNFGVF LY DKALD+ ++P D+ AFPKL +AY+ FFEILFRNHI V+ LDTP+F +V+ + H+GLQ+LDAPL++QCA TIDHLATF+F A K +PA+ AL+AHL P+LL+ L+ TLFN+LLF++ S+ TANQWA
Sbjct: 887 QGAALCMSALTTALAGGYVNFGVFALYGDKALDNALETVLKLAFNIPQRDITAFPKLARAYYAFFEILFRNHINIVLQLDTPMFTQVLAAQHEGLQSLDAPLSAQCAMTIDHLATFYFTKAPKGTPAVRALQAHLQSNPSLLTQLLGTLFNLLLFDNASSQTANQWA 1053
BLAST of mRNA_F-distichus_contig98226.19260.1 vs. uniprot
Match: A0A7S3XL54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL54_HETAK) HSP 1 Score: 182 bits (463), Expect = 4.870e-52 Identity = 93/179 (51.96%), Postives = 125/179 (69.83%), Query Frame = 1
Query: 1 SNIYREKYKGIALCLGMLSTALAGTYVNFGVFTLYQDKALDSXXXXXXXXXLSVPLVDVNAFPKLCKAYFIFFEILFRNHIGAVVALDTPVFMRVMHSLHDGLQALDAPLASQCAATIDHLATFHFKNAN----KDSPAMLALKAHLALEPALLSGLMETLFNILLFESMSNNTANQWA 525
+++Y+EKYKG+A+ L +L+TAL+G YVNFGVF LY DKAL+ L+VP+ +V +PK KAYF FFE+LFRNH ++AL+TP F++V+ + HDG+ ALD P+A+QCA TIDHLA+++F++ P + AL HL EP+LLS LM TLFN LLF MSN QWA
Sbjct: 270 NDLYKEKYKGVAMILNLLTTALSGNYVNFGVFALYNDKALEDALAVALELCLNVPVEEVIVYPKFAKAYFSFFEVLFRNHTETLIALETPTFLQVVRAQHDGITALDTPMAAQCANTIDHLASYYFRHHKPGHPNPKPGIRALNQHLNAEPSLLSKLMATLFNQLLFGPMSN----QWA 444
BLAST of mRNA_F-distichus_contig98226.19260.1 vs. uniprot
Match: A0A4D9CV70_9STRA (Importin N-terminal domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV70_9STRA) HSP 1 Score: 186 bits (471), Expect = 3.180e-51 Identity = 92/174 (52.87%), Postives = 129/174 (74.14%), Query Frame = 1
Query: 4 NIYREKYKGIALCLGMLSTALAGTYVNFGVFTLYQDKALDSXXXXXXXXXLSVPLVDVNAFPKLCKAYFIFFEILFRNHIGAVVALDTPVFMRVMHSLHDGLQALDAPLASQCAATIDHLATFHFKNANKDSPAMLALKAHLALEPALLSGLMETLFNILLFESMSNNTANQWA 525
++Y+EKYKGIA+ L +L+ AL+G YVNFGVF LY+D ALD+ LS+P ++ AFPKL KAYF FFE+LFRNHI AV++L TPVF++V+ + H+GLQ++D L++QCA+TID+LAT++++N +KD P M AL+ HL +P ++ L+ TLFN LLF S+ N WA
Sbjct: 874 DVYKEKYKGIAISLNVLTCALSGNYVNFGVFALYEDPALDNALDVVLRLALSIPFQEILAFPKLSKAYFAFFEVLFRNHIPAVLSLSTPVFLQVIQAQHEGLQSVDPLLSAQCASTIDYLATYYYQNKSKDRPPMRALRNHLQAQPDVIFTLLSTLFNQLLFGSV-----NHWA 1042
BLAST of mRNA_F-distichus_contig98226.19260.1 vs. uniprot
Match: A0A7S0CH83_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CH83_9STRA) HSP 1 Score: 175 bits (444), Expect = 7.590e-48 Identity = 92/170 (54.12%), Postives = 117/170 (68.82%), Query Frame = 1
Query: 4 NIYREKYKGIALCLGMLSTALAGTYVNFGVFTLYQDKALDSXXXXXXXXXLSVPLVDVNAFPKLCKAYFIFFEILFRNHIGAVVALDTPVFMRVMHSLHDGLQALDAPLASQCAATIDHLATFHFKNANKDSPAMLALKAHLALEPALLSGLMETLFNILLFESMSNNTA 513
+IY+ +YKG+AL L +L++AL G YV FGVF LY D AL + L VPL D+ A+PKL KA F F EILFRNHI V+AL+T V M++MH++H+GLQ DAPL+S CA TIDHLAT++F N KD AM L HLA +P L S L T+FN+LLF + N+ A
Sbjct: 570 DIYKTRYKGMALALNVLNSALGGNYVCFGVFALYNDPALKNALDVALQLTLGVPLDDILAYPKLSKAIFGFIEILFRNHITTVLALETRVIMQLMHAVHEGLQCSDAPLSSLCANTIDHLATYYFNNLGKDKEAMHNLNKHLAAQPNLFSSLTATIFNLLLFGAPQNHWA 739
BLAST of mRNA_F-distichus_contig98226.19260.1 vs. uniprot
Match: A0A7S2L6Z5_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L6Z5_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.890e-47 Identity = 89/170 (52.35%), Postives = 119/170 (70.00%), Query Frame = 1
Query: 4 NIYREKYKGIALCLGMLSTALAGTYVNFGVFTLYQDKALDSXXXXXXXXXLSVPLVDVNAFPKLCKAYFIFFEILFRNHIGAVVALDTPVFMRVMHSLHDGLQALDAPLASQCAATIDHLATFHFKNANKDSPAMLALKAHLALEPALLSGLMETLFNILLFESMSNNTA 513
++Y+ +YKGI+L L ++++AL G+YV FGVF LY D+ LD+ LS+PL DV A+PKL KA++ F EILFRNHI + ALDT VFM++M S+H+GLQ+ +A ++SQCA+T+DHLATFHF N N D M L HL P L S L TLFN+LLF + N+ A
Sbjct: 878 DVYKSRYKGISLVLNVINSALGGSYVCFGVFALYNDQCLDNALNISLQLSLSIPLDDVLAYPKLSKAFYGFVEILFRNHITTIFALDTNVFMQLMLSVHEGLQSSEASISSQCASTVDHLATFHFNNKNTDKLPMHNLNKHLTARPDLFSTLTTTLFNLLLFGAAQNHWA 1047
BLAST of mRNA_F-distichus_contig98226.19260.1 vs. uniprot
Match: A0A7S2V6C0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6C0_9STRA) HSP 1 Score: 162 bits (410), Expect = 4.800e-47 Identity = 90/164 (54.88%), Postives = 107/164 (65.24%), Query Frame = 1
Query: 70 GTYVNFGVFTLYQDKALDSXXXXXXXXXLSVPLVDVNAFPKLCKAYFIFFEILFRNHIGAVVALDTPVFMRVMHSLHDGLQALDAPLASQCAATIDHLATFHFKNANKDSP------------AMLALKAHLALEPALLSGLMETLFNILLFESMSNNTANQWA 525
G YVNFGVF LY DKAL+ L++ L DV A+PKL KAYF FFE+LFRNH+ AVV LDTP+F++++ + H+G+Q+LDAPLA+QCA TIDHLATF F + SP AM AL HL P LLS LM TLFN LLF MSN QWA
Sbjct: 1 GNYVNFGVFALYNDKALEDALGVGLKLGLALDLSDVMAYPKLSKAYFSFFEVLFRNHLEAVVVLDTPIFLKIVEAQHEGVQSLDAPLAAQCANTIDHLATFLFTHRPSSSPPTTTSRHRTPKPAMQALNQHLQAHPTLLSSLMATLFNQLLFGPMSN----QWA 160
BLAST of mRNA_F-distichus_contig98226.19260.1 vs. uniprot
Match: A0A1Z5KF71_FISSO (Importin N-terminal domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KF71_FISSO) HSP 1 Score: 173 bits (439), Expect = 6.510e-47 Identity = 88/169 (52.07%), Postives = 119/169 (70.41%), Query Frame = 1
Query: 7 IYREKYKGIALCLGMLSTALAGTYVNFGVFTLYQDKALDSXXXXXXXXXLSVPLVDVNAFPKLCKAYFIFFEILFRNHIGAVVALDTPVFMRVMHSLHDGLQALDAPLASQCAATIDHLATFHFKNANKDSPAMLALKAHLALEPALLSGLMETLFNILLFESMSNNTA 513
+Y+++YKG++L L +L ++L G YV FGVF LYQD+ALD+ LSVP D+ ++ KL KAYF F EILFRNH AV +L+T VFM++M ++HDGLQA DA +++ CA +IDHLATF+F NA KD P + +L HL +P L S LM TLFN+LL+ N+ A
Sbjct: 873 LYKKRYKGLSLALNILISSLGGNYVCFGVFDLYQDRALDNALDVALRLALSVPGDDIQSYVKLSKAYFSFLEILFRNHRNAVFSLETTVFMQIMTAIHDGLQASDATISAFCANSIDHLATFYFSNAQKDRPEVRSLNKHLQAQPNLFSSLMSTLFNLLLYGPPQNHWA 1041
BLAST of mRNA_F-distichus_contig98226.19260.1 vs. uniprot
Match: K0RJV1_THAOC (Importin N-terminal domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RJV1_THAOC) HSP 1 Score: 172 bits (437), Expect = 1.210e-46 Identity = 87/170 (51.18%), Postives = 121/170 (71.18%), Query Frame = 1
Query: 4 NIYREKYKGIALCLGMLSTALAGTYVNFGVFTLYQDKALDSXXXXXXXXXLSVPLVDVNAFPKLCKAYFIFFEILFRNHIGAVVALDTPVFMRVMHSLHDGLQALDAPLASQCAATIDHLATFHFKNANKDSPAMLALKAHLALEPALLSGLMETLFNILLFESMSNNTA 513
+IY+ KYKG++L L +L++AL G YV FGVF+LY D ALD+ LS+PL V A+PKL K+ F F E++FRNH+ A +AL++ VFM++M+++H+GLQA DA ++S CA +DHLATFHF+N KD P + L H+A +P LLS L TLFN+LLF + N+ A
Sbjct: 864 DIYKLKYKGMSLALSVLNSALGGNYVCFGVFSLYNDPALDNALDVSLKMALSIPLEQVIAYPKLSKSVFGFIELMFRNHMKATLALESSVFMQLMNAVHEGLQASDAQISSMCANCVDHLATFHFENMGKDKPEVHNLSKHIAAQPNLLSSLTATLFNLLLFGAPQNHWA 1033
BLAST of mRNA_F-distichus_contig98226.19260.1 vs. uniprot
Match: A0A7S2FW57_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FW57_9STRA) HSP 1 Score: 164 bits (415), Expect = 2.100e-46 Identity = 86/169 (50.89%), Postives = 118/169 (69.82%), Query Frame = 1
Query: 1 SNIYREKYKGIALCLGMLSTALAGTYVNFGVFTLYQDKALDSXXXXXXXXXLSVPLVDVNAFPKLCKAYFIFFEILFRNHIGAVVALDTPVFMRVMHSLHDGLQALDAPLASQCAATIDHLATFHFKNANKDSPAMLALKAHLALEPALLSGLMETLFNILLFESMSNN 507
+N Y+E+YKGIAL L ++ AL G YVNFGVF LY+DKAL++ LSV L DV +FPKL + YF F ++LFRNH+ V A DT FM +M+ LH+GLQALD P+++ CA+ ID+LA++ F N +KD ++ L+AH+A +P+LL L +TLF LLF SN+
Sbjct: 112 ANPYKERYKGIALTLLTMTVALTGNYVNFGVFALYEDKALENALQVALQLILSVGLEDVLSFPKLSRHYFSFLDVLFRNHLPFVAAKDTGTFMNLMNVLHEGLQALDPPMSTHCASAIDYLASYLFINRDKDWQSLHMLQAHVAQDPSLLPKLTQTLFTQLLFGPYSNH 280 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98226.19260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig98226.19260.1 >prot_F-distichus_contig98226.19260.1 ID=prot_F-distichus_contig98226.19260.1|Name=mRNA_F-distichus_contig98226.19260.1|organism=Fucus distichus monoicous|type=polypeptide|length=175bp SNIYREKYKGIALCLGMLSTALAGTYVNFGVFTLYQDKALDSALETALQLback to top mRNA from alignment at F-distichus_contig98226:1..1525+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig98226.19260.1 ID=mRNA_F-distichus_contig98226.19260.1|Name=mRNA_F-distichus_contig98226.19260.1|organism=Fucus distichus monoicous|type=mRNA|length=1525bp|location=Sequence derived from alignment at F-distichus_contig98226:1..1525+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig98226:1..1525+ >mRNA_F-distichus_contig98226.19260.1 ID=mRNA_F-distichus_contig98226.19260.1|Name=mRNA_F-distichus_contig98226.19260.1|organism=Fucus distichus monoicous|type=CDS|length=1050bp|location=Sequence derived from alignment at F-distichus_contig98226:1..1525+ (Fucus distichus monoicous)back to top |