mRNA_F-distichus_contig98201.19258.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig98201.19258.1 vs. uniprot
Match: D7FQV7_ECTSI (Trafficking protein particle complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQV7_ECTSI) HSP 1 Score: 232 bits (592), Expect = 6.810e-76 Identity = 125/133 (93.98%), Postives = 128/133 (96.24%), Query Frame = 1
Query: 1 VSLSAFSFLFSEIVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNT---LFGKNADSLERSTENEDEYMIHEREPLTNSFVSVPSDLGQLNCAALVAGVIAGVLDGASF 390
VSLSAFSFLFSE+VQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSN LFGK ADSLERSTENEDEYMIHEREP+TNSFVSVP+DLGQLNCAALVAGVIAGVLDGASF
Sbjct: 31 VSLSAFSFLFSEMVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNVWKALFGKTADSLERSTENEDEYMIHEREPMTNSFVSVPADLGQLNCAALVAGVIAGVLDGASF 163
BLAST of mRNA_F-distichus_contig98201.19258.1 vs. uniprot
Match: A0A6V1NSM5_HETAK (Trafficking protein particle complex subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NSM5_HETAK) HSP 1 Score: 183 bits (465), Expect = 9.940e-57 Identity = 100/133 (75.19%), Postives = 112/133 (84.21%), Query Frame = 1
Query: 1 VSLSAFSFLFSEIVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNT---LFGKNADSLERSTENEDEYMIHEREPLTNSFVSVPSDLGQLNCAALVAGVIAGVLDGASF 390
VSLSAFSFLFSE+VQY Q+RV SI+DLE++LEE GY +GLRVLEL RER Q+RRVRLLP LQ+VS+N LFGK ADSLERSTENEDEYMIHE EPL N+F+SVP DLG LNCAA AGV+AG LDGASF
Sbjct: 19 VSLSAFSFLFSEMVQYNQNRVMSISDLEKRLEEVGYRVGLRVLELLGHRERAQRRRVRLLPTLQFVSTNVWKYLFGKQADSLERSTENEDEYMIHEAEPLPNAFISVPPDLGHLNCAAFTAGVVAGALDGASF 151
BLAST of mRNA_F-distichus_contig98201.19258.1 vs. uniprot
Match: W7TEN4_9STRA (Trafficking protein particle complex subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEN4_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.640e-54 Identity = 95/133 (71.43%), Postives = 114/133 (85.71%), Query Frame = 1
Query: 1 VSLSAFSFLFSEIVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSNT---LFGKNADSLERSTENEDEYMIHEREPLTNSFVSVPSDLGQLNCAALVAGVIAGVLDGASF 390
VSLSAFSFLFSE+VQY+Q+RV SIADLERKLEEAGYG+G RVLEL FRE+ +R ++L+ +LQ+VSS LF K ADSLERSTENEDEYMIHEREP+TN FVS P+D+ QLNCAA +AG+I+GVL+GAS+
Sbjct: 37 VSLSAFSFLFSEMVQYYQNRVLSIADLERKLEEAGYGVGHRVLELLAFREKQYRREIKLIGVLQFVSSTVWKALFNKVADSLERSTENEDEYMIHEREPITNVFVSAPADISQLNCAAYIAGIISGVLNGASY 169
BLAST of mRNA_F-distichus_contig98201.19258.1 vs. uniprot
Match: A0A836CAJ0_9STRA (Transport protein particle component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAJ0_9STRA) HSP 1 Score: 172 bits (436), Expect = 9.030e-52 Identity = 96/134 (71.64%), Postives = 110/134 (82.09%), Query Frame = 1
Query: 1 VSLSAFSFLFSEIVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRER-LQKRRVRLLPMLQWVSSN---TLFGKNADSLERSTENEDEYMIHEREPLTNSFVSVPSDLGQLNCAALVAGVIAGVLDGASF 390
VSLSAFSFL SE+VQ+ Q RVTSI LER+LEEAGY +GLRVLELQ FR++ + KR+ RLL LQWVS++ LFGK ADSLERSTEN DEYMIHE +P+TN FVSVP DLGQLNCAA +AG+IAG LDGA F
Sbjct: 52 VSLSAFSFLLSEMVQHVQARVTSIDALERRLEEAGYAVGLRVLELQQFRDKSVGKRKTRLLQALQWVSADMWRALFGKTADSLERSTENADEYMIHELQPITNVFVSVPPDLGQLNCAAYIAGIIAGALDGACF 185
BLAST of mRNA_F-distichus_contig98201.19258.1 vs. uniprot
Match: A0A2D4CHI7_PYTIN (Trafficking protein particle complex subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CHI7_PYTIN) HSP 1 Score: 163 bits (412), Expect = 1.460e-48 Identity = 86/133 (64.66%), Postives = 106/133 (79.70%), Query Frame = 1
Query: 1 VSLSAFSFLFSEIVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSN---TLFGKNADSLERSTENEDEYMIHEREPLTNSFVSVPSDLGQLNCAALVAGVIAGVLDGASF 390
VSLSAF+FLFSE+VQYFQ RV +I DLE +L++AG+G+G+RVLEL FRE+ +R RL+ MLQ++ S LFGK AD+LERSTENEDEYMIHE EPLTN F+SVP DLGQL+CAA +AG+I G+L F
Sbjct: 29 VSLSAFAFLFSEMVQYFQGRVQNITDLETRLDDAGFGVGVRVLELLCFREKSGRRETRLINMLQFIVSTCWRALFGKAADALERSTENEDEYMIHELEPLTNKFISVPQDLGQLDCAAFIAGMIRGILTSGGF 161
BLAST of mRNA_F-distichus_contig98201.19258.1 vs. uniprot
Match: A0A5D6XYF3_9STRA (Trafficking protein particle complex subunit n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYF3_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.150e-47 Identity = 85/133 (63.91%), Postives = 107/133 (80.45%), Query Frame = 1
Query: 1 VSLSAFSFLFSEIVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSN---TLFGKNADSLERSTENEDEYMIHEREPLTNSFVSVPSDLGQLNCAALVAGVIAGVLDGASF 390
VSLSAF+FLFSE+VQYFQ RV +I+DLE +L++AG+G+G+RV+EL RE+ +R RL+ MLQ++ S LFGK AD+LERSTENEDEYMIHE EPLTN F+SVP DLGQL+CAA +AGV+ GVL + F
Sbjct: 28 VSLSAFAFLFSEMVQYFQSRVQNISDLESRLDDAGFGVGVRVIELLCHREKPGRRETRLINMLQFIVSTCWKALFGKPADALERSTENEDEYMIHELEPLTNKFISVPPDLGQLDCAAYIAGVVRGVLTSSGF 160
BLAST of mRNA_F-distichus_contig98201.19258.1 vs. uniprot
Match: K3XAK0_GLOUD (Trafficking protein particle complex subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAK0_GLOUD) HSP 1 Score: 159 bits (401), Expect = 1.030e-46 Identity = 85/133 (63.91%), Postives = 106/133 (79.70%), Query Frame = 1
Query: 1 VSLSAFSFLFSEIVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSN---TLFGKNADSLERSTENEDEYMIHEREPLTNSFVSVPSDLGQLNCAALVAGVIAGVLDGASF 390
VSLSAFSFLFSE+VQYFQ RV +I+DLE +L++AG+G+G+RV EL RE+ +R RL+ +LQ++ S LFGK AD+LERSTENEDEYMIHE EPLTN F+SVP DLGQL+CAA +AG+I GVL + F
Sbjct: 42 VSLSAFSFLFSEMVQYFQGRVQNISDLENRLDDAGFGVGVRVGELLCHREKSGRRETRLISILQFIVSTCWKALFGKAADALERSTENEDEYMIHELEPLTNKFISVPPDLGQLDCAAYIAGIIRGVLTSSGF 174
BLAST of mRNA_F-distichus_contig98201.19258.1 vs. uniprot
Match: F0WBL4_9STRA (Trafficking protein particle complex subunit n=2 Tax=Albugo TaxID=65356 RepID=F0WBL4_9STRA) HSP 1 Score: 158 bits (399), Expect = 1.330e-46 Identity = 82/133 (61.65%), Postives = 106/133 (79.70%), Query Frame = 1
Query: 1 VSLSAFSFLFSEIVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSN---TLFGKNADSLERSTENEDEYMIHEREPLTNSFVSVPSDLGQLNCAALVAGVIAGVLDGASF 390
V+LSAFSFLFSE+VQYFQ RV +I+DLE++LE+AGY +G+R +EL +RER +R R L MLQ+V S LFGK AD+LERST NE+EYMIHE EP+TN F+S+PSDLGQL+CAA +AG++ G+L + F
Sbjct: 28 VNLSAFSFLFSEMVQYFQGRVQNISDLEKRLEDAGYNVGVRFIELIIYRERAGRRETRFLGMLQFVVSTCWKALFGKAADALERSTTNENEYMIHELEPITNRFISIPSDLGQLDCAAYIAGIVRGILTSSGF 160
BLAST of mRNA_F-distichus_contig98201.19258.1 vs. uniprot
Match: M4BVJ4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BVJ4_HYAAE) HSP 1 Score: 160 bits (404), Expect = 3.200e-46 Identity = 85/133 (63.91%), Postives = 107/133 (80.45%), Query Frame = 1
Query: 1 VSLSAFSFLFSEIVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSN---TLFGKNADSLERSTENEDEYMIHEREPLTNSFVSVPSDLGQLNCAALVAGVIAGVLDGASF 390
VSLS FSFLFSE+VQYFQ RV +I+DLE +L+ AG+G+G+RVLE+ RE+ +R +RLL MLQ++ SN LFGK AD+LERSTENE+EYMIHE EPLTN FVSVP DLGQL+CAA +AG++ G+L + F
Sbjct: 121 VSLSVFSFLFSEMVQYFQGRVQNISDLENRLDIAGFGVGVRVLEILGHREKSGRREIRLLAMLQFIVSNCWKALFGKAADALERSTENENEYMIHELEPLTNKFVSVPPDLGQLDCAAYIAGIVRGILCSSGF 253
BLAST of mRNA_F-distichus_contig98201.19258.1 vs. uniprot
Match: H3G9X2_PHYRM (Trafficking protein particle complex subunit n=26 Tax=Peronosporaceae TaxID=4777 RepID=H3G9X2_PHYRM) HSP 1 Score: 156 bits (394), Expect = 5.310e-46 Identity = 84/128 (65.62%), Postives = 103/128 (80.47%), Query Frame = 1
Query: 1 VSLSAFSFLFSEIVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFRERLQKRRVRLLPMLQWVSSN---TLFGKNADSLERSTENEDEYMIHEREPLTNSFVSVPSDLGQLNCAALVAGVIAGVL 375
VSLSAFSFLFSE+VQYFQ RV +I+DLE +L+ AG+G+G+RV+EL RE+ +R RLL MLQ++ S LFGK AD+LERSTENE EYMIHE EPLTN FVSVP DLGQL+CAA +AG++ G+L
Sbjct: 16 VSLSAFSFLFSEMVQYFQGRVQNISDLENRLDGAGFGVGVRVVELLCHREKSGRRETRLLAMLQFIVSTCWKALFGKAADALERSTENEYEYMIHELEPLTNKFVSVPPDLGQLDCAAYIAGIVRGIL 143 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98201.19258.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig98201.19258.1 >prot_F-distichus_contig98201.19258.1 ID=prot_F-distichus_contig98201.19258.1|Name=mRNA_F-distichus_contig98201.19258.1|organism=Fucus distichus monoicous|type=polypeptide|length=130bp VSLSAFSFLFSEIVQYFQDRVTSIADLERKLEEAGYGMGLRVLELQTFREback to top mRNA from alignment at F-distichus_contig98201:194..2104- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig98201.19258.1 ID=mRNA_F-distichus_contig98201.19258.1|Name=mRNA_F-distichus_contig98201.19258.1|organism=Fucus distichus monoicous|type=mRNA|length=1911bp|location=Sequence derived from alignment at F-distichus_contig98201:194..2104- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig98201:194..2104- >mRNA_F-distichus_contig98201.19258.1 ID=mRNA_F-distichus_contig98201.19258.1|Name=mRNA_F-distichus_contig98201.19258.1|organism=Fucus distichus monoicous|type=CDS|length=780bp|location=Sequence derived from alignment at F-distichus_contig98201:194..2104- (Fucus distichus monoicous)back to top |