mRNA_F-distichus_contig98029.19240.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig98029.19240.1
Unique NamemRNA_F-distichus_contig98029.19240.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126X4A8_9PHAE (Putative LOV domain-containing protein n=5 Tax=Sargassum TaxID=3015 RepID=A0A126X4A8_9PHAE)

HSP 1 Score: 426 bits (1094), Expect = 1.360e-142
Identity = 223/268 (83.21%), Postives = 244/268 (91.04%), Query Frame = 1
Query:  277 SELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSISSASKWSARGSGDSGGS--RSRPKLDGGARHRSGSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
            +++SDKRRRNREHAKRSRMRKRVRLGGLEGM+LSLRRENVRLRQI+K  IPDRAD+I+R CA+DNTNAD+VAKQDVVQGMRP  SI+S S+W +RG G S  S  RSR KL+GG       GRSK+RCVPSALKLMSPSYQTVKALS+SQANFILTNPNLPDCPIIFASQGFLDLTG +AS+VIGKNCRFLQGPGTDP TVSI+RNNLA+GRDTSVCILNYKADGTPFWNQLSIGVLLDA GQ+ANHVGVLCEVNQMPP+MFHKLLHR
Sbjct:  268 TDVSDKRRRNREHAKRSRMRKRVRLGGLEGMVLSLRRENVRLRQIIKQGIPDRADEIIRMCAKDNTNADMVAKQDVVQGMRPTTSITS-SRWKSRGFGGSSSSISRSRLKLEGGGE----GGRSKERCVPSALKLMSPSYQTVKALSESQANFILTNPNLPDCPIIFASQGFLDLTGYEASKVIGKNCRFLQGPGTDPMTVSILRNNLASGRDTSVCILNYKADGTPFWNQLSIGVLLDAHGQVANHVGVLCEVNQMPPSMFHKLLHR 530          
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126X144_SACJA (Putative LOV domain-containing protein n=3 Tax=Saccharina japonica TaxID=88149 RepID=A0A126X144_SACJA)

HSP 1 Score: 402 bits (1032), Expect = 8.150e-135
Identity = 213/269 (79.18%), Postives = 234/269 (86.99%), Query Frame = 1
Query:  274 GSELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSI-SSASKWSAR-GSGDSGGSRSRPKLDGGARHRSGSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
            GSEL+DKRRRNREHAKRSR+RKRVRLGGLE M+L LRRENVRLR+IVK  IP+RAD I+R CA DNTN D VAKQDVVQGMRP MS+ SS+S WS+R G       RSRPKL+GG R   G   SKDR VPSALKLMSP YQ+VKAL++SQANF+LTNPNLPDCPIIFASQGFL+LTG +  +VIGKNCRFLQGPGTDP TVSI+RNNLA GRDTSVCILNYKADGTPFWNQLSIGVLLDA GQ+ANHVGVLCEVNQMPPA+FH+LLHR
Sbjct:  141 GSELTDKRRRNREHAKRSRLRKRVRLGGLEEMVLGLRRENVRLRRIVKKGIPERADSILRLCASDNTNPDTVAKQDVVQGMRPGMSVGSSSSNWSSRLGXXXXXXXRSRPKLEGGTRRHGGG--SKDRRVPSALKLMSPCYQSVKALAESQANFVLTNPNLPDCPIIFASQGFLELTGYEGRQVIGKNCRFLQGPGTDPGTVSIIRNNLAGGRDTSVCILNYKADGTPFWNQLSIGVLLDAHGQVANHVGVLCEVNQMPPAVFHRLLHR 407          
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126WZI8_9PHAE (Putative LOV domain-containing protein n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A126WZI8_9PHAE)

HSP 1 Score: 388 bits (996), Expect = 4.470e-128
Identity = 208/268 (77.61%), Postives = 236/268 (88.06%), Query Frame = 1
Query:  271 PGSELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSISSASKWSARGSGDSGGSRSRPKLDGGARHRSGSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
            P S+LS+KRRRNREHAKRSRMRKR+RLGGLE M+L LRRENVRLRQ+VK  IPDRA+DI+R+CA DN +ADLVAKQDVVQGMRP+M+++ AS W +R    SGGSR+RPK+D  +RH SG+   K R VPSALKLMSPSYQ+VKALS+SQANFILTNPNLP CPIIFAS GF+DLTG +AS+VIGKNCRFLQGPGTDP TVSI+R NLA GRDTSVCILNYKADGTPFWNQLSIG LLD+QGQ+AN+VGVLCEV QMP A FH+LLHR
Sbjct:  247 PTSDLSEKRRRNREHAKRSRMRKRMRLGGLEEMVLELRRENVRLRQMVKKGIPDRAEDIIRTCASDNADADLVAKQDVVQGMRPSMAVTGASGWGSR---FSGGSRTRPKVD--SRH-SGN---KYRSVPSALKLMSPSYQSVKALSESQANFILTNPNLPGCPIIFASPGFVDLTGYEASQVIGKNCRFLQGPGTDPVTVSIIRKNLAEGRDTSVCILNYKADGTPFWNQLSIGNLLDSQGQVANNVGVLCEVKQMPAADFHRLLHR 505          
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126X3Q0_PETFA (Putative LOV domain-containing protein n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A126X3Q0_PETFA)

HSP 1 Score: 387 bits (993), Expect = 7.700e-126
Identity = 210/280 (75.00%), Postives = 233/280 (83.21%), Query Frame = 1
Query:  259 DDHAPGSELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSI-SSASKWSARGSGDSGGSRSRPKLDGGA--RHRSGSGR-----SKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
            DD   GSEL+DKRRRNREHAKRSR+RKRVRLGGLE M+L LRRENVRLRQ+V   IPDRA  I+R+CA+DNTNADLVAKQDVVQGMRP MS+ SS+S WSARG     G+RSRPKL+GG+  R R   GR     SKDR VPSALKLMSP YQTVKAL+ SQANFILTNPNLPDCPIIFASQGFL+LTG +   VIG+NCR LQGPGTDP T+SIVR+N+  GRD SVCILNYK DG PFWNQLSIGVLLDA GQ+ANHV V+ EVN MPPA+FH+LLHR
Sbjct:  354 DDDPVGSELTDKRRRNREHAKRSRLRKRVRLGGLEEMVLGLRRENVRLRQMVMRGIPDRAGSIIRACAKDNTNADLVAKQDVVQGMRPGMSVGSSSSSWSARG-----GTRSRPKLEGGSSSRKRGSGGRGGGTGSKDRRVPSALKLMSPCYQTVKALADSQANFILTNPNLPDCPIIFASQGFLELTGYEGKDVIGRNCRLLQGPGTDPITLSIVRDNVEAGRDASVCILNYKKDGAPFWNQLSIGVLLDAHGQVANHVAVMYEVNPMPPAVFHRLLHR 628          
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126X2D8_9PHAE (Putative LOV domain-containing protein n=1 Tax=Scytosiphon dotyi TaxID=180438 RepID=A0A126X2D8_9PHAE)

HSP 1 Score: 384 bits (985), Expect = 1.120e-124
Identity = 211/288 (73.26%), Postives = 233/288 (80.90%), Query Frame = 1
Query:  259 DDHAPGSELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSI-SSASKWSARGSGDSGGSRSRPKLDGGARHRSGSGR---------------SKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
            DD   GSEL+DKRRRNREHAKRSR+RKRVRLGGLE M+L LRRENVRLRQ+V   IPDRA  I+R+CA+DNTNADLVAKQDVVQGMRP MS+ SS+S WSARG     G+RSRPKL+GG+   S S R               SKDR VPSALKLMSPSYQTVKAL+ SQANF LTNPNLPDCPIIFASQGFL+LTG +   VIG+NCRFL+GPGTDP T+SIVRNN+  GRD SVCILNYK DGTPFWNQLSIGVLLDA GQ+ANHV V  EVN MPPA+FH+LLHR
Sbjct:  351 DDDPVGSELTDKRRRNREHAKRSRLRKRVRLGGLEEMVLGLRRENVRLRQMVMRGIPDRAGAIIRACAKDNTNADLVAKQDVVQGMRPGMSVGSSSSSWSARG-----GTRSRPKLEGGS---SSSRRXXXXXXXXXXXXXXGSKDRRVPSALKLMSPSYQTVKALADSQANFFLTNPNLPDCPIIFASQGFLELTGYEGKDVIGRNCRFLEGPGTDPVTLSIVRNNVEAGRDASVCILNYKKDGTPFWNQLSIGVLLDAHGQVANHVAVTYEVNPMPPAVFHRLLHR 630          
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A6H5K3S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S9_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 1.160e-123
Identity = 202/274 (73.72%), Postives = 230/274 (83.94%), Query Frame = 1
Query:  256 DDDHAPGSELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSI-SSASKWSARGSGDSGGSRSRPKLDGGARHRSGSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
            DDD   G+EL+DKRRRNREHAKRSR+RKRVRLGGLE +LL LRRENVRLR+++   IPDRA  I+R+C +DNTNAD+VAKQDV+QGMRP MS+ SS+S W+ARG     G+R+RPK  GG    SG GR     VPSALKLMSP YQTVKAL+ SQANF+LTNPNLPDCPIIFASQGFLDLTG   + VIGKNCRFLQGPGTDP T+SI+RNN+A G DTSVCILNYK D T FWNQLSIGVLLD+ GQ+ANHVGV+CEVNQMPPA+FH+LLHR
Sbjct:  356 DDDDPAGTELTDKRRRNREHAKRSRLRKRVRLGGLEELLLGLRRENVRLRKVIMRGIPDRAGAIIRNCTKDNTNADVVAKQDVIQGMRPGMSVGSSSSSWTARG-----GTRTRPKPAGGXXX-SGKGR----YVPSALKLMSPCYQTVKALADSQANFVLTNPNLPDCPIIFASQGFLDLTGYDGNDVIGKNCRFLQGPGTDPVTLSIIRNNVAAGLDTSVCILNYKKDKTQFWNQLSIGVLLDSHGQVANHVGVMCEVNQMPPAVFHRLLHR 619          
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126WV95_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WV95_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 1.180e-123
Identity = 203/268 (75.75%), Postives = 226/268 (84.33%), Query Frame = 1
Query:  274 GSELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSISS-ASKWSARGSGDSGGSRSRPKLDGGARHRSGSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
            GSELS+KRRRNREHAKRSRMRKRVRLGGLE  +L LRRENVRLRQIVK  IPDRADDI+R+CA DNT+ADLV KQDVVQGMRP M+ +S A+ W  R S      R+  +++GG R  S    S+D  VPSALKLMSPSYQ+V AL++SQANFILTNPNLPDCPIIFAS GF+DLTG  AS VIGKNCRFLQG GTDP TVSI+RNNL +GRDTSVCILNYKADGTPFWNQLSIGVLLD+ G++ANHVGVLCEV QMPPA FH+LLHR
Sbjct:  235 GSELSEKRRRNREHAKRSRMRKRVRLGGLEEAVLELRRENVRLRQIVKQGIPDRADDIIRTCASDNTDADLVDKQDVVQGMRPGMTTNSLAAGWGTRTSERV---RNNARVEGGGRKPS----SRDLRVPSALKLMSPSYQSVTALAESQANFILTNPNLPDCPIIFASPGFMDLTGYDASDVIGKNCRFLQGAGTDPVTVSIIRNNLTDGRDTSVCILNYKADGTPFWNQLSIGVLLDSHGRVANHVGVLCEVKQMPPADFHRLLHR 495          
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126WZ47_SARFS (Putative LOV domain-containing protein n=1 Tax=Sargassum fusiforme TaxID=590727 RepID=A0A126WZ47_SARFS)

HSP 1 Score: 331 bits (849), Expect = 9.330e-110
Identity = 173/208 (83.17%), Postives = 185/208 (88.94%), Query Frame = 1
Query:  457 CARDNTNADLVAKQDVVQGMRPAMSISSASKWSARGSGDSGGS--RSRPKLDGGARHRSGSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
            CARDNTNAD+VAKQDVVQGMRP  SI+S S+W +RG G S  S  RSR KLDGG       GRSK+  VPSALKLMSPSYQTVKALS+SQANFILTNPNLPDCPIIFASQGFLDLTG +AS+VIGKNCRFLQGPGTDP TVSI+RNNLA+GRDTSVCILNYKADGTPFWNQLSIGVLLDA GQ+ANHVGVLCEVNQMPP+MFHKLLHR
Sbjct:    2 CARDNTNADMVAKQDVVQGMRPTTSITS-SRWKSRGFGGSSSSIPRSRLKLDGGGE----GGRSKEHRVPSALKLMSPSYQTVKALSESQANFILTNPNLPDCPIIFASQGFLDLTGYEASKVIGKNCRFLQGPGTDPMTVSILRNNLASGRDTSVCILNYKADGTPFWNQLSIGVLLDAHGQVANHVGVLCEVNQMPPSMFHKLLHR 204          
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126WUW4_9PHAE (Putative LOV domain-containing protein n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A126WUW4_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 1.120e-100
Identity = 168/241 (69.71%), Postives = 189/241 (78.42%), Query Frame = 1
Query:  367 MLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAK---QDVVQGMRPAMSI-SSASKWSARGSGDSGGSRSRPKLDGGARHRS-GSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
            M+L LRRENVRLRQ+V   IPDRA  I+R+CA+ N           QDVVQGMRP MS+ SS++ WSARG     G+R R K +GG+      SG  KD  VPSALKLMSPSYQTVKAL  SQANFILTNPNLPDCPIIFASQGFL+LTG +   VIGKNCRFLQGPGTD  T+SIVRNNLA GRD SVCILNYK +GTPFWNQLS+GVLLDA GQ+ANHVGV+CEV+QMPP +FH+LLHR
Sbjct:    1 MVLGLRRENVRLRQLVMSGIPDRAAAIIRTCAKGNXXXXXXXXXXXQDVVQGMRPGMSVGSSSASWSARG-----GTRKRIKAEGGSGGGGVSSGGRKDHRVPSALKLMSPSYQTVKALVDSQANFILTNPNLPDCPIIFASQGFLELTGYEGKDVIGKNCRFLQGPGTDKMTLSIVRNNLAAGRDVSVCILNYKKNGTPFWNQLSVGVLLDAHGQVANHVGVMCEVSQMPPPVFHRLLHR 236          
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126WUS5_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WUS5_9PHAE)

HSP 1 Score: 308 bits (789), Expect = 1.720e-97
Identity = 170/275 (61.82%), Postives = 210/275 (76.36%), Query Frame = 1
Query:  277 SELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSIS-SASKWSARGSGDSGGSRSRPKLDGGA--------RHRSGSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
            +ELSDKRRRNREHAK+SR+RKR  LGGLE  LL LRREN+ LRQ+ K  IPDRA++I+R CA  +T+ D+V K+D+VQGMRP+ SIS   S+ ++  S +    R  P  + G         R R  +GR ++R VPSA KLMSPS+  V AL++SQANF+LTNPN+P  PI+FASQGF  LTG  A +V+G+NCRFLQG GTDP  VSI+RNN+A+GRDTSVCILNYKA GTPFWNQLS+G LLDA+G+IANHVGV+ E+ QMP A FH+LLHR
Sbjct:  180 NELSDKRRRNREHAKQSRLRKRALLGGLEETLLELRRENMCLRQLAKKTIPDRAENIIRECAYVSTDPDVVVKRDIVQGMRPSSSISFRISQATSHASHEKLHGRVSPSENRGGTSNGSTELRGRGRAGRDRER-VPSATKLMSPSHHVVSALAESQANFVLTNPNIPGSPIVFASQGFQALTGYAAEQVVGRNCRFLQGVGTDPMVVSILRNNIAHGRDTSVCILNYKACGTPFWNQLSVGTLLDAEGRIANHVGVMYEIKQMPQADFHRLLHR 453          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A126X4A8_9PHAE1.360e-14283.21Putative LOV domain-containing protein n=5 Tax=Sar... [more]
A0A126X144_SACJA8.150e-13579.18Putative LOV domain-containing protein n=3 Tax=Sac... [more]
A0A126WZI8_9PHAE4.470e-12877.61Putative LOV domain-containing protein n=1 Tax=Dic... [more]
A0A126X3Q0_PETFA7.700e-12675.00Putative LOV domain-containing protein n=1 Tax=Pet... [more]
A0A126X2D8_9PHAE1.120e-12473.26Putative LOV domain-containing protein n=1 Tax=Scy... [more]
A0A6H5K3S9_9PHAE1.160e-12373.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A126WV95_9PHAE1.180e-12375.75Putative LOV domain-containing protein n=1 Tax=Ish... [more]
A0A126WZ47_SARFS9.330e-11083.17Putative LOV domain-containing protein n=1 Tax=Sar... [more]
A0A126WUW4_9PHAE1.120e-10069.71Putative LOV domain-containing protein n=1 Tax=Pun... [more]
A0A126WUS5_9PHAE1.720e-9761.82Putative LOV domain-containing protein n=1 Tax=Ish... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig98029contigF-distichus_contig98029:253..1825 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score300.1
Seed ortholog evalue1.4e-78
Seed eggNOG ortholog2880.D7FQI9
KEGG koko:K14858,ko:K20715
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464
EggNOG free text desc.PAS domain
EggNOG OGs2QU3S@2759,COG2202@1
Ec32 ortholog descriptionaureochrome 5
Ec32 orthologEc-01_008850.1
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001,ko03009
Exons3
Model size1077
Cds size1077
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig98029.19240.1prot_F-distichus_contig98029.19240.1Fucus distichus monoicouspolypeptideF-distichus_contig98029 253..1825 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931158.9561634-CDS-F-distichus_contig98029:252..3731622931158.9561634-CDS-F-distichus_contig98029:252..373Fucus distichus monoicousCDSF-distichus_contig98029 253..373 -
1690886183.6928499-CDS-F-distichus_contig98029:252..3731690886183.6928499-CDS-F-distichus_contig98029:252..373Fucus distichus monoicousCDSF-distichus_contig98029 253..373 -
1622931158.9767253-CDS-F-distichus_contig98029:571..7471622931158.9767253-CDS-F-distichus_contig98029:571..747Fucus distichus monoicousCDSF-distichus_contig98029 572..747 -
1690886183.7133586-CDS-F-distichus_contig98029:571..7471690886183.7133586-CDS-F-distichus_contig98029:571..747Fucus distichus monoicousCDSF-distichus_contig98029 572..747 -
1622931158.9982195-CDS-F-distichus_contig98029:1045..18251622931158.9982195-CDS-F-distichus_contig98029:1045..1825Fucus distichus monoicousCDSF-distichus_contig98029 1046..1825 -
1690886183.7248337-CDS-F-distichus_contig98029:1045..18251690886183.7248337-CDS-F-distichus_contig98029:1045..1825Fucus distichus monoicousCDSF-distichus_contig98029 1046..1825 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig98029.19240.1

>prot_F-distichus_contig98029.19240.1 ID=prot_F-distichus_contig98029.19240.1|Name=mRNA_F-distichus_contig98029.19240.1|organism=Fucus distichus monoicous|type=polypeptide|length=359bp
KNRGVRTPIGSTETSAVEHPKTQGAAAAGKASAPAAPLAGKKMRLNRVAT
VATPVTKIEPFEEPEEDETQDLDEDDEEGFTNREDDDDHAPGSELSDKRR
RNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIV
RSCARDNTNADLVAKQDVVQGMRPAMSISSASKWSARGSGDSGGSRSRPK
LDGGARHRSGSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNL
PDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLAN
GRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPA
MFHKLLHR*
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mRNA from alignment at F-distichus_contig98029:253..1825-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig98029.19240.1 ID=mRNA_F-distichus_contig98029.19240.1|Name=mRNA_F-distichus_contig98029.19240.1|organism=Fucus distichus monoicous|type=mRNA|length=1573bp|location=Sequence derived from alignment at F-distichus_contig98029:253..1825- (Fucus distichus monoicous)
AAGAATCGAGGCGTACGAACTCCGATTGGTTCGACTGAAACTTCAGCCGT AGAGCACCCAAAGACGCAAGGCGCGGCCGCTGCTGGAAAAGCCTCCGCCC CCGCAGCCCCCCTTGCTGGAAAAAAAATGCGGCTTAACAGAGTAGCTACC GTCGCGACCCCGGTGACCAAGATCGAGCCCTTCGAGGAGCCGGAAGAGGA CGAAACGCAAGATCTGGATGAAGACGACGAAGAAGGGTTTACTAACAGAG AGGATGATGATGACCATGCTCCGGGTTCAGAGCTCAGCGACAAGAGGCGA CGCAACCGCGAGCACGCAAAACGTAGCCGCATGCGGAAGCGAGTGCGCCT GGGTGGCTTAGAGGGGATGCTGCTGTCGCTCCGTCGGGAGAACGTCCGCC TCAGGCAGATTGTCAAGCATAACATCCCCGACCGCGCGGACGATATCGTC CGAAGCTGCGCGCGAGATAATACGAATGCCGACCTCGTCGCCAAGCAAGA CGTTGTGCAGGGGATGCGCCCGGCGATGTCCATCAGCTCGGCGTCGAAGT GGAGCGCCCGCGGCAGCGGAGACAGTGGGGGCTCTCGCTCGCGCCCGAAG CTGGACGGTGGCGCGCGCCATCGCAGTGGAAGCGGGCGGAGCAAGGACCG CTGCGTTCCCTCCGCGTTGAAGCTAATGTCCCCCAGCTACCAGACCGTCA AGGCTCTTTCCCAAAGTCAGGCCAATTTCATCCTCACCAACCCGAACCTT CCAGACTGTCCCATTATCTTCGCAAGCCAGGTGAGGGCCTGGGTCGTCCA TTCCAGAGGCTCATCGGTACGATAGGCCAACCAGTTACATGGCGCGTCCG TTCTGCACTCTCTACGATCCTAAGAAGGGCAGGCGCCATTTTCCTTCCCC GCTTTTTTTAGAATATACTCGACGTATATTCACGATTGCAGGATCGCGGG GATACTCGTAGCCCAGTCGGGAACCACTTGGCTCTAGTAGATAGCATCGA GTTTGTCTCATTTATGCTCGACATGCAATGACCAACCCGGGTTTCCCAAT GTTCGCCACTCCAATCATACCTTGCCAGGGTTTCCTTGACCTGACCGGTA ACAAGGCTAGTCGGGTCATCGGGAAAAACTGTCGCTTCCTGCAGGGGCCA GGAACTGACCCGCAGACGGTATCTATCGTGCGCAACAACCTCGCCAACGG GCGGGATACGAGCGTGTGCATCCTCAACTACAAGGCGGATGGAACTCCGT TCTGGTGAGTCGTTGCGGCCCTCGCTGGCGATAAAAAAAACAATCCTGAG GTGGAATGGTGACCGTTATCGGCTCAGGCGTGCATAAAGATGATGCGAGT CCTATGTCTCTTTACGCATTTCAGATCCCTGTTGCAGATGTTCACGACTT TCTTCGACTGTCCGCCGCGTCTCGTGACCCATACGCCTTTCGTGACGTGT AGGAACCAGTTATCCATAGGTGTGTTGCTGGACGCGCAAGGCCAGATCGC GAACCACGTCGGCGTCTTATGCGAGGTCAACCAGATGCCACCGGCTATGT TTCACAAGTTACTACACAGGTGA
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Coding sequence (CDS) from alignment at F-distichus_contig98029:253..1825-

>mRNA_F-distichus_contig98029.19240.1 ID=mRNA_F-distichus_contig98029.19240.1|Name=mRNA_F-distichus_contig98029.19240.1|organism=Fucus distichus monoicous|type=CDS|length=2154bp|location=Sequence derived from alignment at F-distichus_contig98029:253..1825- (Fucus distichus monoicous)
AAGAATCGAGGCGTACGAACTCCGATTGGTTCGACTGAAACTTCAGCCGT
AGAGCACCCAAAGACGCAAGGCGCGGCCGCTGCTGGAAAAGCCTCCGCCC
CCGCAGCCCCCCTTGCTGGAAAAAAAATGCGGCTTAACAGAGTAGCTACC
GTCGCGACCCCGGTGACCAAGATCGAGCCCTTCGAGGAGCCGGAAGAGGA
CGAAACGCAAGATCTGGATGAAGACGACGAAGAAGGGTTTACTAACAGAG
AGGATGATGATGACCATGCTCCGGGTTCAGAGCTCAGCGACAAGAGGCGA
CGCAACCGCGAGCACGCAAAACGTAGCCGCATGCGGAAGCGAGTGCGCCT
GGGTGGCTTAGAGGGGATGCTGCTGTCGCTCCGTCGGGAGAACGTCCGCC
TCAGGCAGATTGTCAAGCATAACATCCCCGACCGCGCGGACGATATCGTC
CGAAGCTGCGCGCGAGATAATACGAATGCCGACCTCGTCGCCAAGCAAGA
CGTTGTGCAGGGGATGCGCCCGGCGATGTCCATCAGCTCGGCGTCGAAGT
GGAGCGCCCGCGGCAGCGGAGACAGTGGGGGCTCTCGCTCGCGCCCGAAG
CTGGACGGTGGCGCGCGCCATCGCAGTGGAAGCGGGCGGAGCAAGGACCG
CTGCGTTCCCTCCGCGTTGAAGCTAATGTCCCCCAGCTACCAGACCGTCA
AGGCTCTTTCCCAAAGTCAGGCCAATTTCATCCTCACCAACCCGAACCTT
CCAGACTGTCCCATTATCTTCGCAAGCCAGAAGAATCGAGGCGTACGAAC
TCCGATTGGTTCGACTGAAACTTCAGCCGTAGAGCACCCAAAGACGCAAG
GCGCGGCCGCTGCTGGAAAAGCCTCCGCCCCCGCAGCCCCCCTTGCTGGA
AAAAAAATGCGGCTTAACAGAGTAGCTACCGTCGCGACCCCGGTGACCAA
GATCGAGCCCTTCGAGGAGCCGGAAGAGGACGAAACGCAAGATCTGGATG
AAGACGACGAAGAAGGGTTTACTAACAGAGAGGATGATGATGACCATGCT
CCGGGTTCAGAGCTCAGCGACAAGAGGCGACGCAACCGCGAGCACGCAAA
ACGTAGCCGCATGCGGAAGCGAGTGCGCCTGGGTGGCTTAGAGGGGATGC
TGCTGTCGCTCCGTCGGGAGAACGTCCGCCTCAGGCAGATTGTCAAGCAT
AACATCCCCGACCGCGCGGACGATATCGTCCGAAGCTGCGCGCGAGATAA
TACGAATGCCGACCTCGTCGCCAAGCAAGACGTTGTGCAGGGGATGCGCC
CGGCGATGTCCATCAGCTCGGCGTCGAAGTGGAGCGCCCGCGGCAGCGGA
GACAGTGGGGGCTCTCGCTCGCGCCCGAAGCTGGACGGTGGCGCGCGCCA
TCGCAGTGGAAGCGGGCGGAGCAAGGACCGCTGCGTTCCCTCCGCGTTGA
AGCTAATGTCCCCCAGCTACCAGACCGTCAAGGCTCTTTCCCAAAGTCAG
GCCAATTTCATCCTCACCAACCCGAACCTTCCAGACTGTCCCATTATCTT
CGCAAGCCAGGGTTTCCTTGACCTGACCGGTAACAAGGCTAGTCGGGTCA
TCGGGAAAAACTGTCGCTTCCTGCAGGGGCCAGGAACTGACCCGCAGACG
GTATCTATCGTGCGCAACAACCTCGCCAACGGGCGGGATACGAGCGTGTG
CATCCTCAACTACAAGGCGGATGGAACTCCGTTCTGGGTTTCCTTGACCT
GACCGGTAACAAGGCTAGTCGGGTCATCGGGAAAAACTGTCGCTTCCTGC
AGGGGCCAGGAACTGACCCGCAGACGGTATCTATCGTGCGCAACAACCTC
GCCAACGGGCGGGATACGAGCGTGTGCATCCTCAACTACAAGGCGGATGG
AACTCCGTTCTGGAACCAGTTATCCATAGGTGTGTTGCTGGACGCGCAAG
GCCAGATCGCGAACCACGTCGGCGTCTTATGCGAGGTCAACCAGATGCCA
CCGGCTATGTTTCACAAGTTACTACACAGGTGAGAACCAGTTATCCATAG
GTGTGTTGCTGGACGCGCAAGGCCAGATCGCGAACCACGTCGGCGTCTTA
TGCGAGGTCAACCAGATGCCACCGGCTATGTTTCACAAGTTACTACACAG
GTGA
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