mRNA_F-distichus_contig98029.19240.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126X4A8_9PHAE (Putative LOV domain-containing protein n=5 Tax=Sargassum TaxID=3015 RepID=A0A126X4A8_9PHAE) HSP 1 Score: 426 bits (1094), Expect = 1.360e-142 Identity = 223/268 (83.21%), Postives = 244/268 (91.04%), Query Frame = 1
Query: 277 SELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSISSASKWSARGSGDSGGS--RSRPKLDGGARHRSGSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
+++SDKRRRNREHAKRSRMRKRVRLGGLEGM+LSLRRENVRLRQI+K IPDRAD+I+R CA+DNTNAD+VAKQDVVQGMRP SI+S S+W +RG G S S RSR KL+GG GRSK+RCVPSALKLMSPSYQTVKALS+SQANFILTNPNLPDCPIIFASQGFLDLTG +AS+VIGKNCRFLQGPGTDP TVSI+RNNLA+GRDTSVCILNYKADGTPFWNQLSIGVLLDA GQ+ANHVGVLCEVNQMPP+MFHKLLHR
Sbjct: 268 TDVSDKRRRNREHAKRSRMRKRVRLGGLEGMVLSLRRENVRLRQIIKQGIPDRADEIIRMCAKDNTNADMVAKQDVVQGMRPTTSITS-SRWKSRGFGGSSSSISRSRLKLEGGGE----GGRSKERCVPSALKLMSPSYQTVKALSESQANFILTNPNLPDCPIIFASQGFLDLTGYEASKVIGKNCRFLQGPGTDPMTVSILRNNLASGRDTSVCILNYKADGTPFWNQLSIGVLLDAHGQVANHVGVLCEVNQMPPSMFHKLLHR 530
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126X144_SACJA (Putative LOV domain-containing protein n=3 Tax=Saccharina japonica TaxID=88149 RepID=A0A126X144_SACJA) HSP 1 Score: 402 bits (1032), Expect = 8.150e-135 Identity = 213/269 (79.18%), Postives = 234/269 (86.99%), Query Frame = 1
Query: 274 GSELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSI-SSASKWSAR-GSGDSGGSRSRPKLDGGARHRSGSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
GSEL+DKRRRNREHAKRSR+RKRVRLGGLE M+L LRRENVRLR+IVK IP+RAD I+R CA DNTN D VAKQDVVQGMRP MS+ SS+S WS+R G RSRPKL+GG R G SKDR VPSALKLMSP YQ+VKAL++SQANF+LTNPNLPDCPIIFASQGFL+LTG + +VIGKNCRFLQGPGTDP TVSI+RNNLA GRDTSVCILNYKADGTPFWNQLSIGVLLDA GQ+ANHVGVLCEVNQMPPA+FH+LLHR
Sbjct: 141 GSELTDKRRRNREHAKRSRLRKRVRLGGLEEMVLGLRRENVRLRRIVKKGIPERADSILRLCASDNTNPDTVAKQDVVQGMRPGMSVGSSSSNWSSRLGXXXXXXXRSRPKLEGGTRRHGGG--SKDRRVPSALKLMSPCYQSVKALAESQANFVLTNPNLPDCPIIFASQGFLELTGYEGRQVIGKNCRFLQGPGTDPGTVSIIRNNLAGGRDTSVCILNYKADGTPFWNQLSIGVLLDAHGQVANHVGVLCEVNQMPPAVFHRLLHR 407
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126WZI8_9PHAE (Putative LOV domain-containing protein n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A126WZI8_9PHAE) HSP 1 Score: 388 bits (996), Expect = 4.470e-128 Identity = 208/268 (77.61%), Postives = 236/268 (88.06%), Query Frame = 1
Query: 271 PGSELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSISSASKWSARGSGDSGGSRSRPKLDGGARHRSGSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
P S+LS+KRRRNREHAKRSRMRKR+RLGGLE M+L LRRENVRLRQ+VK IPDRA+DI+R+CA DN +ADLVAKQDVVQGMRP+M+++ AS W +R SGGSR+RPK+D +RH SG+ K R VPSALKLMSPSYQ+VKALS+SQANFILTNPNLP CPIIFAS GF+DLTG +AS+VIGKNCRFLQGPGTDP TVSI+R NLA GRDTSVCILNYKADGTPFWNQLSIG LLD+QGQ+AN+VGVLCEV QMP A FH+LLHR
Sbjct: 247 PTSDLSEKRRRNREHAKRSRMRKRMRLGGLEEMVLELRRENVRLRQMVKKGIPDRAEDIIRTCASDNADADLVAKQDVVQGMRPSMAVTGASGWGSR---FSGGSRTRPKVD--SRH-SGN---KYRSVPSALKLMSPSYQSVKALSESQANFILTNPNLPGCPIIFASPGFVDLTGYEASQVIGKNCRFLQGPGTDPVTVSIIRKNLAEGRDTSVCILNYKADGTPFWNQLSIGNLLDSQGQVANNVGVLCEVKQMPAADFHRLLHR 505
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126X3Q0_PETFA (Putative LOV domain-containing protein n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A126X3Q0_PETFA) HSP 1 Score: 387 bits (993), Expect = 7.700e-126 Identity = 210/280 (75.00%), Postives = 233/280 (83.21%), Query Frame = 1
Query: 259 DDHAPGSELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSI-SSASKWSARGSGDSGGSRSRPKLDGGA--RHRSGSGR-----SKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
DD GSEL+DKRRRNREHAKRSR+RKRVRLGGLE M+L LRRENVRLRQ+V IPDRA I+R+CA+DNTNADLVAKQDVVQGMRP MS+ SS+S WSARG G+RSRPKL+GG+ R R GR SKDR VPSALKLMSP YQTVKAL+ SQANFILTNPNLPDCPIIFASQGFL+LTG + VIG+NCR LQGPGTDP T+SIVR+N+ GRD SVCILNYK DG PFWNQLSIGVLLDA GQ+ANHV V+ EVN MPPA+FH+LLHR
Sbjct: 354 DDDPVGSELTDKRRRNREHAKRSRLRKRVRLGGLEEMVLGLRRENVRLRQMVMRGIPDRAGSIIRACAKDNTNADLVAKQDVVQGMRPGMSVGSSSSSWSARG-----GTRSRPKLEGGSSSRKRGSGGRGGGTGSKDRRVPSALKLMSPCYQTVKALADSQANFILTNPNLPDCPIIFASQGFLELTGYEGKDVIGRNCRLLQGPGTDPITLSIVRDNVEAGRDASVCILNYKKDGAPFWNQLSIGVLLDAHGQVANHVAVMYEVNPMPPAVFHRLLHR 628
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126X2D8_9PHAE (Putative LOV domain-containing protein n=1 Tax=Scytosiphon dotyi TaxID=180438 RepID=A0A126X2D8_9PHAE) HSP 1 Score: 384 bits (985), Expect = 1.120e-124 Identity = 211/288 (73.26%), Postives = 233/288 (80.90%), Query Frame = 1
Query: 259 DDHAPGSELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSI-SSASKWSARGSGDSGGSRSRPKLDGGARHRSGSGR---------------SKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
DD GSEL+DKRRRNREHAKRSR+RKRVRLGGLE M+L LRRENVRLRQ+V IPDRA I+R+CA+DNTNADLVAKQDVVQGMRP MS+ SS+S WSARG G+RSRPKL+GG+ S S R SKDR VPSALKLMSPSYQTVKAL+ SQANF LTNPNLPDCPIIFASQGFL+LTG + VIG+NCRFL+GPGTDP T+SIVRNN+ GRD SVCILNYK DGTPFWNQLSIGVLLDA GQ+ANHV V EVN MPPA+FH+LLHR
Sbjct: 351 DDDPVGSELTDKRRRNREHAKRSRLRKRVRLGGLEEMVLGLRRENVRLRQMVMRGIPDRAGAIIRACAKDNTNADLVAKQDVVQGMRPGMSVGSSSSSWSARG-----GTRSRPKLEGGS---SSSRRXXXXXXXXXXXXXXGSKDRRVPSALKLMSPSYQTVKALADSQANFFLTNPNLPDCPIIFASQGFLELTGYEGKDVIGRNCRFLEGPGTDPVTLSIVRNNVEAGRDASVCILNYKKDGTPFWNQLSIGVLLDAHGQVANHVAVTYEVNPMPPAVFHRLLHR 630
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A6H5K3S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S9_9PHAE) HSP 1 Score: 381 bits (978), Expect = 1.160e-123 Identity = 202/274 (73.72%), Postives = 230/274 (83.94%), Query Frame = 1
Query: 256 DDDHAPGSELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSI-SSASKWSARGSGDSGGSRSRPKLDGGARHRSGSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
DDD G+EL+DKRRRNREHAKRSR+RKRVRLGGLE +LL LRRENVRLR+++ IPDRA I+R+C +DNTNAD+VAKQDV+QGMRP MS+ SS+S W+ARG G+R+RPK GG SG GR VPSALKLMSP YQTVKAL+ SQANF+LTNPNLPDCPIIFASQGFLDLTG + VIGKNCRFLQGPGTDP T+SI+RNN+A G DTSVCILNYK D T FWNQLSIGVLLD+ GQ+ANHVGV+CEVNQMPPA+FH+LLHR
Sbjct: 356 DDDDPAGTELTDKRRRNREHAKRSRLRKRVRLGGLEELLLGLRRENVRLRKVIMRGIPDRAGAIIRNCTKDNTNADVVAKQDVIQGMRPGMSVGSSSSSWTARG-----GTRTRPKPAGGXXX-SGKGR----YVPSALKLMSPCYQTVKALADSQANFVLTNPNLPDCPIIFASQGFLDLTGYDGNDVIGKNCRFLQGPGTDPVTLSIIRNNVAAGLDTSVCILNYKKDKTQFWNQLSIGVLLDSHGQVANHVGVMCEVNQMPPAVFHRLLHR 619
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126WV95_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WV95_9PHAE) HSP 1 Score: 376 bits (965), Expect = 1.180e-123 Identity = 203/268 (75.75%), Postives = 226/268 (84.33%), Query Frame = 1
Query: 274 GSELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSISS-ASKWSARGSGDSGGSRSRPKLDGGARHRSGSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
GSELS+KRRRNREHAKRSRMRKRVRLGGLE +L LRRENVRLRQIVK IPDRADDI+R+CA DNT+ADLV KQDVVQGMRP M+ +S A+ W R S R+ +++GG R S S+D VPSALKLMSPSYQ+V AL++SQANFILTNPNLPDCPIIFAS GF+DLTG AS VIGKNCRFLQG GTDP TVSI+RNNL +GRDTSVCILNYKADGTPFWNQLSIGVLLD+ G++ANHVGVLCEV QMPPA FH+LLHR
Sbjct: 235 GSELSEKRRRNREHAKRSRMRKRVRLGGLEEAVLELRRENVRLRQIVKQGIPDRADDIIRTCASDNTDADLVDKQDVVQGMRPGMTTNSLAAGWGTRTSERV---RNNARVEGGGRKPS----SRDLRVPSALKLMSPSYQSVTALAESQANFILTNPNLPDCPIIFASPGFMDLTGYDASDVIGKNCRFLQGAGTDPVTVSIIRNNLTDGRDTSVCILNYKADGTPFWNQLSIGVLLDSHGRVANHVGVLCEVKQMPPADFHRLLHR 495
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126WZ47_SARFS (Putative LOV domain-containing protein n=1 Tax=Sargassum fusiforme TaxID=590727 RepID=A0A126WZ47_SARFS) HSP 1 Score: 331 bits (849), Expect = 9.330e-110 Identity = 173/208 (83.17%), Postives = 185/208 (88.94%), Query Frame = 1
Query: 457 CARDNTNADLVAKQDVVQGMRPAMSISSASKWSARGSGDSGGS--RSRPKLDGGARHRSGSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
CARDNTNAD+VAKQDVVQGMRP SI+S S+W +RG G S S RSR KLDGG GRSK+ VPSALKLMSPSYQTVKALS+SQANFILTNPNLPDCPIIFASQGFLDLTG +AS+VIGKNCRFLQGPGTDP TVSI+RNNLA+GRDTSVCILNYKADGTPFWNQLSIGVLLDA GQ+ANHVGVLCEVNQMPP+MFHKLLHR
Sbjct: 2 CARDNTNADMVAKQDVVQGMRPTTSITS-SRWKSRGFGGSSSSIPRSRLKLDGGGE----GGRSKEHRVPSALKLMSPSYQTVKALSESQANFILTNPNLPDCPIIFASQGFLDLTGYEASKVIGKNCRFLQGPGTDPMTVSILRNNLASGRDTSVCILNYKADGTPFWNQLSIGVLLDAHGQVANHVGVLCEVNQMPPSMFHKLLHR 204
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126WUW4_9PHAE (Putative LOV domain-containing protein n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A126WUW4_9PHAE) HSP 1 Score: 309 bits (792), Expect = 1.120e-100 Identity = 168/241 (69.71%), Postives = 189/241 (78.42%), Query Frame = 1
Query: 367 MLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAK---QDVVQGMRPAMSI-SSASKWSARGSGDSGGSRSRPKLDGGARHRS-GSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
M+L LRRENVRLRQ+V IPDRA I+R+CA+ N QDVVQGMRP MS+ SS++ WSARG G+R R K +GG+ SG KD VPSALKLMSPSYQTVKAL SQANFILTNPNLPDCPIIFASQGFL+LTG + VIGKNCRFLQGPGTD T+SIVRNNLA GRD SVCILNYK +GTPFWNQLS+GVLLDA GQ+ANHVGV+CEV+QMPP +FH+LLHR
Sbjct: 1 MVLGLRRENVRLRQLVMSGIPDRAAAIIRTCAKGNXXXXXXXXXXXQDVVQGMRPGMSVGSSSASWSARG-----GTRKRIKAEGGSGGGGVSSGGRKDHRVPSALKLMSPSYQTVKALVDSQANFILTNPNLPDCPIIFASQGFLELTGYEGKDVIGKNCRFLQGPGTDKMTLSIVRNNLAAGRDVSVCILNYKKNGTPFWNQLSVGVLLDAHGQVANHVGVMCEVSQMPPPVFHRLLHR 236
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Match: A0A126WUS5_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WUS5_9PHAE) HSP 1 Score: 308 bits (789), Expect = 1.720e-97 Identity = 170/275 (61.82%), Postives = 210/275 (76.36%), Query Frame = 1
Query: 277 SELSDKRRRNREHAKRSRMRKRVRLGGLEGMLLSLRRENVRLRQIVKHNIPDRADDIVRSCARDNTNADLVAKQDVVQGMRPAMSIS-SASKWSARGSGDSGGSRSRPKLDGGA--------RHRSGSGRSKDRCVPSALKLMSPSYQTVKALSQSQANFILTNPNLPDCPIIFASQGFLDLTGNKASRVIGKNCRFLQGPGTDPQTVSIVRNNLANGRDTSVCILNYKADGTPFWNQLSIGVLLDAQGQIANHVGVLCEVNQMPPAMFHKLLHR 1074
+ELSDKRRRNREHAK+SR+RKR LGGLE LL LRREN+ LRQ+ K IPDRA++I+R CA +T+ D+V K+D+VQGMRP+ SIS S+ ++ S + R P + G R R +GR ++R VPSA KLMSPS+ V AL++SQANF+LTNPN+P PI+FASQGF LTG A +V+G+NCRFLQG GTDP VSI+RNN+A+GRDTSVCILNYKA GTPFWNQLS+G LLDA+G+IANHVGV+ E+ QMP A FH+LLHR
Sbjct: 180 NELSDKRRRNREHAKQSRLRKRALLGGLEETLLELRRENMCLRQLAKKTIPDRAENIIRECAYVSTDPDVVVKRDIVQGMRPSSSISFRISQATSHASHEKLHGRVSPSENRGGTSNGSTELRGRGRAGRDRER-VPSATKLMSPSHHVVSALAESQANFVLTNPNIPGSPIVFASQGFQALTGYAAEQVVGRNCRFLQGVGTDPMVVSILRNNIAHGRDTSVCILNYKACGTPFWNQLSVGTLLDAEGRIANHVGVMYEIKQMPQADFHRLLHR 453 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98029.19240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig98029.19240.1 >prot_F-distichus_contig98029.19240.1 ID=prot_F-distichus_contig98029.19240.1|Name=mRNA_F-distichus_contig98029.19240.1|organism=Fucus distichus monoicous|type=polypeptide|length=359bp KNRGVRTPIGSTETSAVEHPKTQGAAAAGKASAPAAPLAGKKMRLNRVATback to top mRNA from alignment at F-distichus_contig98029:253..1825- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig98029.19240.1 ID=mRNA_F-distichus_contig98029.19240.1|Name=mRNA_F-distichus_contig98029.19240.1|organism=Fucus distichus monoicous|type=mRNA|length=1573bp|location=Sequence derived from alignment at F-distichus_contig98029:253..1825- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig98029:253..1825- >mRNA_F-distichus_contig98029.19240.1 ID=mRNA_F-distichus_contig98029.19240.1|Name=mRNA_F-distichus_contig98029.19240.1|organism=Fucus distichus monoicous|type=CDS|length=2154bp|location=Sequence derived from alignment at F-distichus_contig98029:253..1825- (Fucus distichus monoicous)back to top |