mRNA_F-distichus_contig9725.19181.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig9725.19181.1 vs. uniprot
Match: D8LHX1_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHX1_ECTSI) HSP 1 Score: 207 bits (527), Expect = 4.930e-57 Identity = 123/311 (39.55%), Postives = 175/311 (56.27%), Query Frame = 2
Query: 2 SGRAWLFEREGR-ALCGAVESAVEVKRE--GPDQPYVKLYDENNRTRRVTVAIMPKRAIDEKRGQYREDPMNGIAALDILSAPGHRHVLQKVAALEDDETVYLVMPATG-----------MRKYQGWKPTSREEMETVRNLIRQLVEGLEDVHSKGICHARVCLNNVLFDESREHAYITNFGWSLLMPVDGENRRLKSVPDGRQSEASYCSPETFKG-QAYDGVKVDVFAAGAMLFWMLAGRPPFKTASRIDKDFKRLVCDGEVAEAIGQDQLELIPNGEMVVTLLKRMMARRPEDRLSLDQVLQHPWMAP 889
SG ++F R + A+ G V A+EV+ G Y + DE RR V MPK I +E+PM A L ++ PGH +V+ AAL+DD TVYLV P G YQ P + T+ L+ Q+V+G VHSKGICHA + L N L + + A++ +FG +L MP D +R SVPD R+++ SYC PET+KG Q YDGVKVD+F+ G M F + G PPF ASR+D+ F+++V G++ + ++ L+P + V LL+RMM+ +PE+R +VL+ PW AP
Sbjct: 20 SGLTFMFVRSLKDAIYGQVWDAIEVRLHSGGGVDFYTPVLDERGVPRRFAVKRMPKETIARLLPTMQENPMREAAFLTLVQDPGHPNVVGLAAALQDDTTVYLVTPFVGGVGSGEMFDWVADNYQNPAPEA-----TIMPLLYQIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFMIDFGMALQMPTDEAGQRFMSVPDRRRAKRSYCPPETYKGRQPYDGVKVDMFSVGCMGFMLFTGIPPFDYASRLDRKFRKVVFQGDLQGYLADYEMPLLP--DPVFQLLRRMMSYQPENRPLPVEVLEDPWFAP 323
BLAST of mRNA_F-distichus_contig9725.19181.1 vs. uniprot
Match: A0A6H5L877_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L877_9PHAE) HSP 1 Score: 207 bits (526), Expect = 7.450e-57 Identity = 126/311 (40.51%), Postives = 174/311 (55.95%), Query Frame = 2
Query: 2 SGRAWLFEREGR-ALCGAVESAVEVKRE--GPDQPYVKLYDENNRTRRVTVAIMPKRAIDEKRGQYREDPMNGIAALDILSAPGHRHVLQKVAALEDDETVYLVMPATG-----------MRKYQGWKPTSREEMETVRNLIRQLVEGLEDVHSKGICHARVCLNNVLFDESREHAYITNFGWSLLMPVDGENRRLKSVPDGRQSEASYCSPETFKG-QAYDGVKVDVFAAGAMLFWMLAGRPPFKTASRIDKDFKRLVCDGEVAEAIGQDQLELIPNGEMVVTLLKRMMARRPEDRLSLDQVLQHPWMAP 889
SG ++F R + A+ G V A+EV+ G Y + DE RR V M K I + +E+PM A L ++ PGH +V+ AALEDD TVYLV P G YQ P + T+ L+RQ+V+G VHSKGICHA + L N L + + A+I +FG + MP + +R SVPDGR+++ SYC PET+KG + YDGVKVDVF+ G M F M G PPF ASR+D+ F+R+V G++ + + +P + V LL+ MM+ RPEDR +VL++PW AP
Sbjct: 23 SGLTFMFVRSLKDAIYGQVWDALEVRLHNGGGVTFYTSVLDERGVPRRFAVKRMLKATIARLQPTIQENPMREAAFLTLVQDPGHPNVVGLAAALEDDTTVYLVTPFVGGVGSGEMFDWVADNYQNPAPEA-----TIMPLLRQIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFIIDFGMAQQMPTNEHGQRFMSVPDGRRAKRSYCPPETYKGREPYDGVKVDVFSVGCMGFMMFTGIPPFDYASRLDRKFRRVVFHGDLQGYLADYGMPPLP--DQVFGLLQGMMSYRPEDRPLPVEVLENPWFAP 326
BLAST of mRNA_F-distichus_contig9725.19181.1 vs. uniprot
Match: A0A7S2UUC5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUC5_9STRA) HSP 1 Score: 144 bits (363), Expect = 3.270e-34 Identity = 99/316 (31.33%), Postives = 156/316 (49.37%), Query Frame = 2
Query: 2 SGRAWLFEREGR-ALCGAVESAVEVKREGPD-QPYVKLYDENNRTRRVTVAIMPKRAIDEKRGQYREDPMNGIAALDILS-AP-----------------GHRHVLQKVAALEDDETVYLVMPATGMRKYQGWKPTSREEMETVRNLIRQLVEGLEDVHSKGICHARVCLNNVLFDESREHAYITNFGWSLLMPVDGEN-RRLKSVPDGRQSEASYCSPETFKGQA-YDGVKVDVFAAGAMLFWMLAGRPPFKTASRIDKDFKRLVCDGEVAEAIGQDQLELIPNGEMVVTLLKRMMARRPEDRLSLDQVLQHPWM 883
SG +L R R + G V+ A+ + G Y + Y V + +M KR I E RG++ EDP+ IAA+ LS AP GH +VL + ++D++ VY VMP G + + + R R+++ G +HS+G+CH + L NVL S+ I + G L MPVD + L P G+ + +Y SPE F + + G +D +A G +LF ML G PPF+TA+ +D F+ ++ ++E + ++ L P V LL RM+ P++RL ++++ HPWM
Sbjct: 44 SGNVYLLVRTLRECIYGKVKHAIRIVDVGNGVYEYGREY--------VAIKVMFKRKIQELRGRHNEDPIKEIAAMQFLSTAPEGVEGTKQGEGESTHQGGHPNVLPLLECVQDEDLVYCVMPYCGAELFSFVEQQGAFLEDRARQYFREILCGTNYLHSRGVCHRDLSLENVLV--SQNTCIIIDMGMCLRMPVDQTTGKHLLINPQGQCGKRNYMSPEIFLNKRPFSGEAIDFWACGIILFIMLTGVPPFETATEVDPRFQ-MISSWRLSEMLSLWEINLSPEA---VDLLSRMLRPNPQERLKYEEIMAHPWM 345
BLAST of mRNA_F-distichus_contig9725.19181.1 vs. uniprot
Match: A0A3P3YEL7_PLABS (Protein kinase domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YEL7_PLABS) HSP 1 Score: 134 bits (336), Expect = 5.680e-30 Identity = 83/244 (34.02%), Postives = 132/244 (54.10%), Query Frame = 2
Query: 194 EDPMNGIAALDILSAPGHRHVLQKVAALEDDETVYLVMP-ATGMRKYQGWKPTSREEMETVRNLIRQLVEGLEDVHSKGICHARVCLNNVLFDESREHAYITNFGWSLLMPVDGENRRLKSVPDGRQSEASYCSPETFKGQAYDGVKVDVFAAGAMLFWMLAGRPPFKTASRIDKDFKRLVCDGEVAEAIGQDQLELIPNGEMVVTLLKRMMARRPEDRLSLDQVLQHPWMAP-GV*G*LDPVP 919
EDP+N + L+ L PGH HV++ + +LEDDE ++V+ A+ + + R + T QL + LE +HS +CH + L N+L D+ + +T+FG L D R P + + Y SPE F GQA+ G + D+++AG +LF ML G PP++ + D+ F+ L C GE+ E + + Q+ P + + LL ++ EDRL+L VLQHPW++ + + PVP
Sbjct: 194 EDPINEMHLLEQLGDPGHPHVVRLIESLEDDEHYWMVLEFASRGELFDVISESGRLDENTAAKYFLQLAKALEYIHSHNVCHLDLSLENILLDDHGD-LKLTDFG--LARSFDAV-RPFPPCPVTKPGKIGYMSPEIFAGQAFYGPQADIYSAGVILFVMLFGCPPYELPTLADRRFRLLYC-GEIRELLRKWQMSSSP---LALDLLSGLLCAA-EDRLTLRDVLQHPWLSQDSITPCITPVP 428
BLAST of mRNA_F-distichus_contig9725.19181.1 vs. uniprot
Match: A0A7S3PX35_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PX35_9STRA) HSP 1 Score: 132 bits (331), Expect = 4.670e-29 Identity = 84/270 (31.11%), Postives = 141/270 (52.22%), Query Frame = 2
Query: 137 VTVAIMPKRAIDEKRGQYREDPMNGIAALDILSAPGHRHVLQKVAALEDDETVYLVMPATGMRKYQGWKPTSRE--------EMETVRNLIRQLVEGLEDVHSKGICHARVCLNNVLFDESREHAYITNFGWSLLMPVDGEN------------RRLKSVPDGRQSEASYCSPETFKG-QAYDGVKVDVFAAGAMLFWMLAGRPPFKTASRIDKDFKRLVCDGEVAEAIGQDQLELIPNGEMVVTLLKRMMARRPEDRLSLDQVLQHPWM 883
V + ++ + + RG+ EDP+ IAA+ ++ H +VL V L+DD+ ++ +MP G+ E R RQ++EGL + KGICH + L N+L DE+ + + +FG L +P +N RRL P G + +Y SPE F+ +++DG +D++AAG +L+ ML G PP+ A+ D+ F+ ++ +G++ E + ++EL + LL+ M+ R +DRLSL QV+ HPW+
Sbjct: 192 VAIKMVEWAKVHQSRGRLLEDPVKEIAAMQLIGTE-HPNVLGSVEVLQDDDYLFSIMPYARGGDLFGYVVRDTELRGGEGGMSEPVARYWFRQVLEGLHFLQGKGICHRDLSLENILVDEN--NCLVIDFGMCLRIPYSSQNTNQVVDVDLGGIRRLMK-PMGTCGKHNYMSPEIFQNKESFDGFSIDLWAAGVILYIMLTGFPPYDHATLADQRFE-VIVEGQMMEQLKMWEIEL---SDEAGDLLQSMLQLRAKDRLSLGQVMNHPWV 453
BLAST of mRNA_F-distichus_contig9725.19181.1 vs. uniprot
Match: A0A6U0UU60_9STRA (Hypothetical protein n=3 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UU60_9STRA) HSP 1 Score: 129 bits (325), Expect = 5.140e-29 Identity = 86/263 (32.70%), Postives = 131/263 (49.81%), Query Frame = 2
Query: 137 VTVAIMPKRAIDEKRGQYREDPMNGIAALDIL--SAPGHRHVLQKVAALEDDETVYLVMP-ATGMRKYQGWKPTSREEMETVRNLIRQLVEGLEDVHSKGICHARVCLNNVLFD---ESREHAYITNFGWSLLMPVDGENRRLKSVPDGRQSEASYCSPETFKGQAYDGVKVDVFAAGAMLFWMLAGRPPFKTASRIDKDFKRLVC--DGEVAEAIGQDQLELIPNGEMVVTLLKRMMARRPEDRLSLDQVLQHPWMAPGV*G 901
V V +M + I+E RG++ E+P N IA + L A GH HVL A ++++MP +G + + E E R L RQ+ +G+E + + H + L NVL E A + +FG +L +P D + R R + Y SPE + +DG K+DV+A G MLF ML G PP++ A R D+ R +C GE+ + + +P V LLKR+ E R+S+ ++L+HPW G+ G
Sbjct: 107 VAVKMMSLQKIEEMRGRHAENPFNEIACMSFLHSQAGGHPHVLMYEALCRTQSHLFMIMPYCSGGELHSVIEENGALEPERARALFRQMTQGVEFLGRASVAHRDLSLENVLLHRRIEEERIAMLIDFGMALRIPRDKDGRCHWISRQLRAGKLHYMSPEIISQRPFDGSKIDVWALGVMLFIMLVGVPPWRMADRRDQ---RYICVVSGELPRLLEHWGVR-VPGD--AVDLLKRIFVEDIETRISIPEILRHPWYTGGLAG 363
BLAST of mRNA_F-distichus_contig9725.19181.1 vs. uniprot
Match: A0A1Z5JDY4_FISSO (Protein kinase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDY4_FISSO) HSP 1 Score: 129 bits (323), Expect = 2.020e-28 Identity = 96/313 (30.67%), Postives = 145/313 (46.33%), Query Frame = 2
Query: 5 GRAWLFEREGRALCGAVESAVEVKREGPDQPYVKLYDENNRTRRVTVAIMPKRAIDEKRGQYREDPMNGIAALDILSAPGHRHVLQKVAALEDDETVYLVMPATGMRKYQGWKPTSREEM--------ETVRNLIRQLVEGLEDVHSKGICHARVCLNNVLFDESREHAYITNFGWSLLMPVD-----------GENRRLKSVPDGRQSEASYCSPETF-KGQAYDGVKVDVFAAGAMLFWMLAGRPPFKTASRIDKDFKRLVCDGEVAEAIGQDQLELIPNGEMVVTLLKRMMARRPEDRLSLDQVLQHPWM 883
G W R A + A P P + E R V V ++ + RG+ EDP+ +AA+ +L + H HVL + L+D E +Y +MP G EE R RQ++ GL + S+GICH + L NVL + + I + G L +P D G RRL P G + +Y SPE F + +DG +D++AAG +L+ ML G PP+ ASR DK ++ L+ G++ E + + L + V LL+ M+ P+ RL+L +VL+HPW+
Sbjct: 84 GSVWACLVLRRHFGVAADDAARAAGVQPGSPNAPVVWEITEGRHVAVKMVEWARVHRMRGRLLEDPVKEVAAMQMLGSTPHPHVLGTMEVLQDGECLYSIMPYCRDGDLFGVVVEHAEENGGEIGMAEPVARYWFRQILWGLHHLQSEGICHRDLSLENVLVNG--DVCMIIDMGMCLRVPYDDGAGAVTDVHKGVIRRLIK-PQGVCGKHNYMSPEVFANAEDFDGFAIDLWAAGVVLYIMLTGFPPYDQASRADKRYE-LIVTGKLVEQLRNWDIYL---SDEVGHLLQAMLQEDPKKRLTLAEVLEHPWV 389
BLAST of mRNA_F-distichus_contig9725.19181.1 vs. uniprot
Match: A0A1E7FBI2_9STRA (Ser/thr kinase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBI2_9STRA) HSP 1 Score: 123 bits (308), Expect = 8.280e-28 Identity = 82/247 (33.20%), Postives = 126/247 (51.01%), Query Frame = 2
Query: 179 RGQYREDPMNGIAALDILSAPGHRHVLQKVAALEDDETVYLVMPATGMRKYQGWKPTSREEM--------ETVRNLIRQLVEGLEDVHSKGICHARVCLNNVLFDESREHAYITNFGWSLLMPVDGENRRLKSVPDGRQSEASYCSPETFKG-QAYDGVKVDVFAAGAMLFWMLAGRPPFKTASRIDKDFKRLVCDGEVAEAIGQDQLELIPNGEMVVTLLKRMMARRPEDRLSLDQVLQHPWMAPG 892
RG+ EDP+ +AA+ ++ + HVL + L+DDE ++ VMP G EE R RQ++ GL+ + S G+CH + L NVL S E+ I + G L +P R +K P G + +Y SPE F A+DG +D++AAG +L+ ML G PP+ AS+ D+ F L+ +G + + + L NG LL+ M+ P DRL+L +++ HPW+ G
Sbjct: 2 RGRLLEDPIKEVAAMQLIGGK-NPHVLGPIEVLQDDEYLFTVMPYCSGGDLFGVVVKYAEESGGEIGMPEPVARFWFRQILLGLQHLQSVGVCHRDLSLENVLV--SSENCLIIDMGMCLRVPYRTIRRLIK--PQGVCGKHNYMSPEIFANTNAFDGFSIDLWAAGVILYIMLTGFPPYDQASQTDQRFD-LIVNGNLIRQLESWDIRLSQNGG---DLLQSMLQVDPRDRLTLAEIMAHPWVNTG 239
BLAST of mRNA_F-distichus_contig9725.19181.1 vs. uniprot
Match: B8BR32_THAPS (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR32_THAPS) HSP 1 Score: 122 bits (306), Expect = 1.260e-27 Identity = 81/250 (32.40%), Postives = 130/250 (52.00%), Query Frame = 2
Query: 179 RGQYREDPMNGIAALDILSAPGHR-HVLQKVAALEDDETVYLVMPATGMRKYQGWKPTSREEMETVRNL-IRQLVEGLEDVHSKGICHARVCLNNVLFDESREHAYITNFGWSLLMPVD-------------GENRRLKSVPDGRQSEASYCSPETF-KGQAYDGVKVDVFAAGAMLFWMLAGRPPFKTASRIDKDFKRLVCDGEVAEAIGQDQLELIPNGEMVVTLLKRMMARRPEDRLSLDQVLQHPW 880
+G++ EDP+ +AA+ + + G + +VL +D++ +YL MP + G+ + E V RQL+ L + KGICH + L N+L D++ + A + + G L +P + G R+L P G+ + +Y SPE + +DG VD++AAG +LF ML G PPF+ AS D + RLVC G + + I Q ++ P + LL++M+ P DRL+L V+ HPW
Sbjct: 2 KGKHIEDPLKEVAAMQFMCSDGAKPNVLPCWDLFKDEKYIYLCMPFCSSGELFGYIERNGRFDECVAKFWFRQLLNALYHLQKKGICHRDISLENILVDQNTK-ALVIDMGMCLRVPFNSPTGCESVYDSSAGTLRKL-IYPAGQCGKPNYISPEVLLNNEPFDGFAVDLWAAGIVLFIMLIGLPPFEWASNDDPRY-RLVCRGGLGQLIQQWHRQISP---LAADLLQKMLREHPTDRLTLFDVMNHPW 245
BLAST of mRNA_F-distichus_contig9725.19181.1 vs. uniprot
Match: A0A4D9CSW9_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSW9_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.310e-27 Identity = 88/313 (28.12%), Postives = 158/313 (50.48%), Query Frame = 2
Query: 2 SGRAWLFEREGR-ALCGAVESAVEVKREGPDQPYVKLYDENNRTRRVTVAIMPKRAIDEKRGQYREDPMNGIAALDILSAPG-HRHVLQKVAALEDDETVYLVMPATGMRKYQGWKPTSREEME-------TVRNLIRQLVEGLEDVHSKGICHARVCLNNVLFDESREHAYITNFGWSLLMPV----------DGENRRLKSVPDGRQSEASYCSPETFKGQAYDGVKVDVFAAGAMLFWMLAGRPPFKTASRIDKDFKRLVCDGEVAEAIGQDQLELIPNGEMVVTLLKRMMARRPEDRLSLDQVLQHPWM 883
+GRA+ F R R + G V V ++++ +L ++ V + + K+ I+E RG+ RE+P++ +AAL ++ A G H+HV + + LEDDE +Y V P YQG + + E R L Q++ GL +H + +CH + L N+L D + I + G L +P+ D E R+ G+ + +Y P + + +DG VD++A G +LF +LAG PP + + D + R++ G++ E + Q+ + + LL+ ++ PE+R +++V++HPW+
Sbjct: 200 TGRAYCFTRTLRECIFGVVRHGVTLEKDAGAGGVYRLCP----SQPVAIKCVSKQKIEEGRGRLRENPIDELAALQMVGAGGGHQHVQRLLECLEDDEAIYAVSPF-----YQGGELFAVIEARGGGLPEARARTLFSQILSGLAFMHDRRLCHRDMSLENILVDG--QDGVIIDMGMCLRVPLLPALPPSHPDDPETPRVLLRKQGQCGKITYMDPVVLEDKDFDGFAVDMWACGVILFILLAGVPPLELPALTDPRY-RMIQAGKLGELMDVWQMRISREAKH---LLESLLKAVPEERAKMEEVIRHPWL 497 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9725.19181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig9725.19181.1 >prot_F-distichus_contig9725.19181.1 ID=prot_F-distichus_contig9725.19181.1|Name=mRNA_F-distichus_contig9725.19181.1|organism=Fucus distichus monoicous|type=polypeptide|length=249bp MPKRAIDEKRGQYREDPMNGIAALDILSAPGHRHVLQKVAALEDDETVYLback to top mRNA from alignment at F-distichus_contig9725:3107..10349+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig9725.19181.1 ID=mRNA_F-distichus_contig9725.19181.1|Name=mRNA_F-distichus_contig9725.19181.1|organism=Fucus distichus monoicous|type=mRNA|length=7243bp|location=Sequence derived from alignment at F-distichus_contig9725:3107..10349+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig9725:3107..10349+ >mRNA_F-distichus_contig9725.19181.1 ID=mRNA_F-distichus_contig9725.19181.1|Name=mRNA_F-distichus_contig9725.19181.1|organism=Fucus distichus monoicous|type=CDS|length=1494bp|location=Sequence derived from alignment at F-distichus_contig9725:3107..10349+ (Fucus distichus monoicous)back to top |