mRNA_F-distichus_contig97133.19166.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig97133.19166.1 vs. uniprot
Match: A0A6H5KFM7_9PHAE (RING-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFM7_9PHAE) HSP 1 Score: 352 bits (903), Expect = 8.100e-117 Identity = 168/203 (82.76%), Postives = 185/203 (91.13%), Query Frame = 1
Query: 1 CVYAMPISGCPCCDQEFGHDDGLFILPVEPYSAGMLFGDDVRRGREDQHQSRTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCQSRPMGEEHFAKHREAQKRLSDLEEMFLMAESQTSRGIANTQLLSERIQIEWRERFIGHAHTVNQKLKNAWDWNALRKKSDLSSGALSKV 609
C+Y+MPI CP CD +FG+DDGLFILPVEPYSA F +D R+G + +HQSRTGRWHSYETMYAQRIVADF+AGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRC RPMGEEH AKHREAQKRLSDLEEMFLMAESQT+RG+ANTQ+LSE IQ EWRERFIGHAHTVNQKLKNAWDWN+ R+K++LSS ALSK+
Sbjct: 102 CIYSMPIVRCPVCDMDFGNDDGLFILPVEPYSATNFFEEDERKGGDREHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEMFLMAESQTNRGVANTQILSECIQKEWRERFIGHAHTVNQKLKNAWDWNSSRRKAELSSDALSKL 304
BLAST of mRNA_F-distichus_contig97133.19166.1 vs. uniprot
Match: D8LER0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER0_ECTSI) HSP 1 Score: 355 bits (912), Expect = 1.580e-115 Identity = 170/202 (84.16%), Postives = 186/202 (92.08%), Query Frame = 1
Query: 1 CVYAMPISGCPCCDQEFGHDDGLFILPVEPYSAGMLFGDDVRRGREDQHQSRTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCQSRPMGEEHFAKHREAQKRLSDLEEMFLMAESQTSRGIANTQLLSERIQIEWRERFIGHAHTVNQKLKNAWDWNALRKKSDLSSGALSK 606
C+Y+MPI CP CD +FG+DDGLFILPVEPYSA LF +D R+GR+ +HQSRTGRWHSYETMYAQRIVADF+AGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRC RPMGEEH AKHREAQKRLSDLEEMFLMAESQT+RG+ANTQ+LSE IQ EWRERFIGHAHTVNQKLKNAWDWN+ R+K++LSS ALSK
Sbjct: 102 CIYSMPIVRCPVCDMDFGNDDGLFILPVEPYSATNLFEEDERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEMFLMAESQTNRGVANTQILSECIQKEWRERFIGHAHTVNQKLKNAWDWNSSRRKAELSSDALSK 303
BLAST of mRNA_F-distichus_contig97133.19166.1 vs. uniprot
Match: D8LLI7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLI7_ECTSI) HSP 1 Score: 273 bits (699), Expect = 9.370e-89 Identity = 145/216 (67.13%), Postives = 170/216 (78.70%), Query Frame = 1
Query: 1 CVYAMPISGCPCCDQEFGH--DDGLFILPVEPYS-AGMLFG---DDVRRGRED--QHQSRTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCQSRPMGEEHFAKHREAQKRLSDLEEMFLMAESQTSRGIANTQLLSERIQIEWRERFIGHAHTVNQKLKNAWDWN-----ALRKKSDLSSGALSKV 609
C+YAMPI+ CP CDQ F + D GL ILPVEP+S AG G DD R G + + Q+RTGRWHS+ETMYAQRIVADF+AGT+PL EGTKLGN LCNILNCSPSRLSKKLKIGKK FQ+ + RPM EH A+HREAQKRLSDLEEMFLMAES+ +RG+AN + LSE IQ EWRER + HA VNQ+LKNAWDWN A RK+++LS+ AL+K+
Sbjct: 57 CIYAMPITRCPVCDQAFPNTNDGGLLILPVEPFSDAGGATGESEDDSRTGAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEEMFLMAESRANRGMANAETLSECIQKEWRERLVEHALAVNQRLKNAWDWNSSRKRAERKRAELSTNALNKL 272
BLAST of mRNA_F-distichus_contig97133.19166.1 vs. uniprot
Match: A0A836CDJ8_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ8_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.610e-66 Identity = 106/207 (51.21%), Postives = 142/207 (68.60%), Query Frame = 1
Query: 1 CVYAMPISGCPCCDQEFGHDDGLFILPVEPYSAGMLFGDDVRRGREDQHQSRTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCQSRPMGEEHFAKHREAQKRLSDLEEMFLMAESQTSRGIANTQLLSERIQIEWRERFIGHAHTVNQKLKNAWDWNALRKKSDLS----SGALSKV 609
C+Y +P+S CP C + +GL +LPVEP++ D + RTGRWH YET YAQ ++ DFEAGT+P+ EGTKL LC +LNC+ +RLSKKLKIGK+++ +R E A H Q+R+S+LEEMFLMAE+QT+RG T LSE++Q EWRERF+GHAH++NQKLK+AW WN+ R+ SDLS S A++K+
Sbjct: 40 CIYQLPLSECPVCRADMTQSEGLQVLPVEPHNNEPAENADT--------ELRTGRWHHYETQYAQHLMEDFEAGTLPIGEGTKLATLLCRLLNCNQTRLSKKLKIGKRFYAHGPTRIRTPEAIAAHSVRQRRISELEEMFLMAEAQTARGALTTPGLSEKMQTEWRERFVGHAHSMNQKLKDAWSWNSKRRVSDLSTTNTSAAINKL 238
BLAST of mRNA_F-distichus_contig97133.19166.1 vs. uniprot
Match: A0A835ZCD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD8_9STRA) HSP 1 Score: 188 bits (478), Expect = 5.010e-53 Identity = 89/151 (58.94%), Postives = 116/151 (76.82%), Query Frame = 1
Query: 154 RTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCQSRPMGEEHFAKHREAQKRLSDLEEMFLMAESQTSRGIANTQLLSERIQIEWRERFIGHAHTVNQKLKNAWDWNALRKKSDLSSGALSK 606
RTGRWHSYET+YAQ ++ DFEAGT+P+ EGTKL + LC +LNC+ +RLSKKLKIGK+++ +R E A HR Q+R+S+LEEMFLMAE QT RG A T +LSE++Q EWRERF+ HAHTVNQKL++AW WN+ ++ S A++K
Sbjct: 68 RTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSNKRTGPSGSDAITK 218
BLAST of mRNA_F-distichus_contig97133.19166.1 vs. uniprot
Match: A0A4D9CWS0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWS0_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 5.740e-12 Identity = 41/121 (33.88%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 211 FEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCQSRPMGEEHFAKHREAQKRLSDLEEMFLMAESQTSRGIANTQLLSERIQIEWRERFIGHAHTVNQKLKNAWDWNALRK 573
F +G +PL +G++LG FLC++L C+ +RLS KL+ GK+ F+ + E ++ + Q++LS EE+FL S +A S +Q+EWR +F+ V ++ N +W+A K
Sbjct: 4 FGSGMLPLRDGSRLGTFLCSLLQCTSARLSSKLRTGKRNFRYLVDESISAESIFRYEQEQRQLSRREELFLHYLSPEEAALA-----SRSLQLEWRLQFLHLGKQVGVRVSNLHEWDAFLK 119
BLAST of mRNA_F-distichus_contig97133.19166.1 vs. uniprot
Match: A0A836CP88_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP88_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 8.340e-10 Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 154 RTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQRCQS 345
R G+W E YA+R++A+F+AG +PL++GT L FL +LNC P R+SKK IGK+ F+R Q+
Sbjct: 5 RRGKWTQEEDAYARRLIAEFKAGLLPLTDGTTLRTFLSIMLNCDPMRISKKFTGAHCIGKQVFRRDQA 72
BLAST of mRNA_F-distichus_contig97133.19166.1 vs. uniprot
Match: A0A1E7FJB7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FJB7_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.030e-9 Identity = 44/109 (40.37%), Postives = 61/109 (55.96%), Query Frame = 1
Query: 139 DQHQSRTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQR--CQSRPMGEEHFAKHREAQKRLSDLEEMFLMAESQTSR 447
++ Q R G+W E YA R++ +F+AG +PL++GT L FL +LNC P R+SKK IGK+ F+R + E K R LSDLE FL +QT+R
Sbjct: 43 NRQQLRRGKWTPEEEAYANRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRTADLNRLTPEQIQKSRAE---LSDLERRFLERVAQTNR 148
BLAST of mRNA_F-distichus_contig97133.19166.1 vs. uniprot
Match: A0A7S1BV59_9STRA (Hypothetical protein n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BV59_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.830e-9 Identity = 43/108 (39.81%), Postives = 62/108 (57.41%), Query Frame = 1
Query: 154 RTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQR--CQSRPMGEEHFAKHREAQKRLSDLEEMFLMAESQTSRGIAN 459
R G+W + E YA R++ +F+AG +PL++GT L FL +LNC P R+SKK IGK+ F+R + E + RE LS+LE FL +QT+R +N
Sbjct: 146 RRGKWTAEEEAYANRLIKEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGGNCIGKQVFRRRTADINSLTPEQIQQSREE---LSELERRFLERVAQTNRVKSN 250
BLAST of mRNA_F-distichus_contig97133.19166.1 vs. uniprot
Match: A0A7S4J6Z5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J6Z5_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 2.000e-9 Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 1
Query: 154 RTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQRCQSRPMGEEHFAKHREAQKRLSDLEEMFLMAESQTSR 447
R G+W E YA R++ +F+AG +PL++GT L FL +LNC P R+SKK IGK+ F+R ++ + + +++++ LS+LE FL +QT+R
Sbjct: 40 RRGKWTPEEESYANRLILEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRR-RTADINRLTPEQIQQSRQELSELERRFLERVAQTNR 140 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig97133.19166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig97133.19166.1 >prot_F-distichus_contig97133.19166.1 ID=prot_F-distichus_contig97133.19166.1|Name=mRNA_F-distichus_contig97133.19166.1|organism=Fucus distichus monoicous|type=polypeptide|length=199bp MPISGCPCCDQEFGHDDGLFILPVEPYSAGMLFGDDVRRGREDQHQSRTGback to top mRNA from alignment at F-distichus_contig97133:48..2160+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig97133.19166.1 ID=mRNA_F-distichus_contig97133.19166.1|Name=mRNA_F-distichus_contig97133.19166.1|organism=Fucus distichus monoicous|type=mRNA|length=2113bp|location=Sequence derived from alignment at F-distichus_contig97133:48..2160+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig97133:48..2160+ >mRNA_F-distichus_contig97133.19166.1 ID=mRNA_F-distichus_contig97133.19166.1|Name=mRNA_F-distichus_contig97133.19166.1|organism=Fucus distichus monoicous|type=CDS|length=1194bp|location=Sequence derived from alignment at F-distichus_contig97133:48..2160+ (Fucus distichus monoicous)back to top |