mRNA_F-distichus_contig97103.19163.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig97103.19163.1 vs. uniprot
Match: D8LTS5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTS5_ECTSI) HSP 1 Score: 288 bits (737), Expect = 3.330e-87 Identity = 152/170 (89.41%), Postives = 162/170 (95.29%), Query Frame = 1
Query: 1 QGSRRAVLALERMGLDVWMVTGDNRRVAAALARRLGVAPHRVMAEVLPAEKARKVTELQLMGGCVAMVGDGVNDAPALATADVGIAVGAGTQVAMEAADMVLVRSDVCDVVSALHLGRKVFGRIRLNFLFAMVYNLCGVPIAAGVFYPLLHVRVPPALAGLTMALSSISV 510
+GSRRAVLAL+RMGLDVW+VTGDNRRVA ALARRLG+AP RV+AEVLPA KARKV ELQL GG VAMVGDGVNDAPALATADVGIAVGAGTQVAMEAADMVLVRSDVCDVVSALHLGRKVFGRIRLNF+FAM+YNLCGVPIAAGV YP LH+R+PPALAGL+MALSSISV
Sbjct: 1102 EGSRRAVLALDRMGLDVWVVTGDNRRVATALARRLGIAPERVIAEVLPAGKARKVQELQLAGGHVAMVGDGVNDAPALATADVGIAVGAGTQVAMEAADMVLVRSDVCDVVSALHLGRKVFGRIRLNFVFAMLYNLCGVPIAAGVLYPFLHIRLPPALAGLSMALSSISV 1271
BLAST of mRNA_F-distichus_contig97103.19163.1 vs. uniprot
Match: A0A836CEY3_9STRA (Putative copper-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEY3_9STRA) HSP 1 Score: 206 bits (524), Expect = 2.000e-58 Identity = 109/167 (65.27%), Postives = 134/167 (80.24%), Query Frame = 1
Query: 19 VLALERMGLD---VWMVTGDNRRVAAALARRLGVAPHRVMAEVLPAEKARKVTELQLMGGCVAMVGDGVNDAPALATADVGIAVGAGTQVAMEAADMVLVRSDVCDVVSALHLGRKVFGRIRLNFLFAMVYNLCGVPIAAGVFYPLLHVRVPPALAGLTMALSSISV 510
V AL+ MGL VWMVTGDN R A +L R LG+ R++AEVLPA KARKV ELQ MG VAMVGDG+ND+PALA ADVGIA+GAGTQVA+EAA MVLVR+++ DVV ALHL ++VF RIR NF++AM+YNLCG+P AAGV +P +H ++P A AGL+M +SS+SV
Sbjct: 963 VAALQHMGLKAIHVWMVTGDNSRTARSLGRNLGIPAERIVAEVLPAHKARKVRELQSMGEVVAMVGDGINDSPALAAADVGIAIGAGTQVAIEAAQMVLVRNNLHDVVVALHLSKRVFRRIRANFMWAMLYNLCGIPFAAGVLFPFVHHQLPTAFAGLSMTMSSVSV 1129
BLAST of mRNA_F-distichus_contig97103.19163.1 vs. uniprot
Match: A0A7S3Y839_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y839_HETAK) HSP 1 Score: 190 bits (482), Expect = 7.200e-57 Identity = 103/165 (62.42%), Postives = 127/165 (76.97%), Query Frame = 1
Query: 16 AVLALERMGLDVWMVTGDNRRVAAALARRLGVAPHRVMAEVLPAEKARKVTELQLMGGCVAMVGDGVNDAPALATADVGIAVGAGTQVAMEAADMVLVRSDVCDVVSALHLGRKVFGRIRLNFLFAMVYNLCGVPIAAGVFYPLLHVRVPPALAGLTMALSSISV 510
AV AL+ MGL VW+VTGDN R AAALARR+G+ V A VLPA+KA ++ +LQ G VAMVGDG+ND+PALA ADVGIA+GAG QVA+EAA MVLVRS + DV +ALHL R VF RIRLNF++AM YN+ +P+AAG P++H VPP +A L MA SS++V
Sbjct: 19 AVAALQHMGLQVWLVTGDNPRTAAALARRVGIPEAFVRAGVLPAQKADQIRQLQGAGHTVAMVGDGINDSPALAQADVGIAIGAGAQVAVEAAAMVLVRSHLHDVYTALHLSRTVFNRIRLNFIWAMGYNVLMIPMAAGALIPVIHTTVPPQMAALAMAFSSVTV 183
BLAST of mRNA_F-distichus_contig97103.19163.1 vs. uniprot
Match: A0A0L0DS42_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DS42_THETB) HSP 1 Score: 199 bits (505), Expect = 7.360e-56 Identity = 106/168 (63.10%), Postives = 132/168 (78.57%), Query Frame = 1
Query: 7 SRRAVLALERMGLDVWMVTGDNRRVAAALARRLGVAPHRVMAEVLPAEKARKVTELQLMGGCVAMVGDGVNDAPALATADVGIAVGAGTQVAMEAADMVLVRSDVCDVVSALHLGRKVFGRIRLNFLFAMVYNLCGVPIAAGVFYPLLHVRVPPALAGLTMALSSISV 510
+R + LE G+ VWMVTGDN R A A+AR LG+AP RV A+VLPA+K+ KV+ELQ G VAMVGDG+NDAPAL AD+GIA+GAGT VA+E+ADMVL++SD+ DVV+AL L R + RIR NF +A VYN G+PIAAG+FYPL+ V +PPA+AG MALSS+SV
Sbjct: 709 ARPVIEHLEASGILVWMVTGDNERTALAIARDLGIAPDRVFAQVLPADKSAKVSELQNRGLRVAMVGDGINDAPALTKADLGIAIGAGTDVAIESADMVLMKSDLRDVVTALELARVTYARIRHNFFWAFVYNCVGIPIAAGLFYPLVRVTLPPAVAGAAMALSSVSV 876
BLAST of mRNA_F-distichus_contig97103.19163.1 vs. uniprot
Match: A0A7R9ZMI7_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZMI7_9STRA) HSP 1 Score: 180 bits (456), Expect = 5.020e-54 Identity = 94/161 (58.39%), Postives = 121/161 (75.16%), Query Frame = 1
Query: 28 LERMGLDVWMVTGDNRRVAAALARRLGVAPHRVMAEVLPAEKARKVTELQLMGGCVAMVGDGVNDAPALATADVGIAVGAGTQVAMEAADMVLVRSDVCDVVSALHLGRKVFGRIRLNFLFAMVYNLCGVPIAAGVFYPLLHVRVPPALAGLTMALSSISV 510
L G+DVWMVTGDNR A ++A++L + +RV+AE LP K ++V LQ G VAMVGDGVND+PALA +DVG++VG G ++A EA+D+VLVR +V DV ALHL R +F RI+LN L ++VYN VPIAAGVFYPL+ R+PP +A L MALSS+SV
Sbjct: 22 LRNSGIDVWMVTGDNRLTAHSIAQQLNLPTNRVIAEALPLAKVQQVKRLQSQGHVVAMVGDGVNDSPALAESDVGMSVGTGAEIAAEASDIVLVRGNVTDVCCALHLSRVIFRRIKLNLLLSLVYNALAVPIAAGVFYPLVRTRLPPTVAALAMALSSVSV 182
BLAST of mRNA_F-distichus_contig97103.19163.1 vs. uniprot
Match: A0A812WM87_SYMMI (HMA5 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WM87_SYMMI) HSP 1 Score: 185 bits (469), Expect = 1.710e-53 Identity = 98/165 (59.39%), Postives = 128/165 (77.58%), Query Frame = 1
Query: 19 VLALERMGLDVWMVTGDNRRVAAALARRLGVAPHRVMAEVLPAEKARKVTELQL-MGGCVAMVGDGVNDAPALATADVGIAVGAGTQVAMEAADMVLVRSDVCDVVSALHLGRKVFGRIRLNFLFAMVYNLCGVPIAAGVFYPLLHVRVPPALAGLTMALSSISV 510
V AL+ MG+DVWMVTGDN+ AAA+ LG+ R++A LPAEK RKV ELQ G CVAMVGDG+ND+PA++ A++GIAVGAG+ +A++AADMV+VR+++ D V AL L + VFGRIR N L+A++YN+ +P+AAGV +PL H +PP AGL MALSSISV
Sbjct: 185 VAALKAMGMDVWMVTGDNKTTAAAIGDELGIPNDRIVAGALPAEKVRKVMELQEDYGRCVAMVGDGINDSPAISQANLGIAVGAGSHIAVDAADMVIVRNNLFDTVVALDLSKMVFGRIRWNLLWALLYNVMAIPVAAGVSFPLTHTILPPQYAGLCMALSSISV 349
BLAST of mRNA_F-distichus_contig97103.19163.1 vs. uniprot
Match: A0A662X9L1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9L1_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.480e-53 Identity = 102/175 (58.29%), Postives = 125/175 (71.43%), Query Frame = 1
Query: 7 SRRAVLALERMGLDVWMVTGDNRRVAAALARRLGVAPHRVMAEVLPAEKARKVTELQLMGG-------CVAMVGDGVNDAPALATADVGIAVGAGTQVAMEAADMVLVRSDVCDVVSALHLGRKVFGRIRLNFLFAMVYNLCGVPIAAGVFYPLLHVRVPPALAGLTMALSSISV 510
S V L+ MGLDVW++TGDN R A+A+ARR+G+ V A LP EKA ++ LQ V MVGDGVNDAPALA +DVG+A+GAGTQ+A ADMVLV+S+V DVV AL L R VF RIRLNF F++VYN G+P+AAG+F+PLLH +PPA AGL MA SS+SV
Sbjct: 31 SMAVVNHLKSMGLDVWLITGDNLRTASAIARRMGI--DHVKAVALPGEKASQIKALQSQVNPVTQKPRVVCMVGDGVNDAPALAQSDVGMAIGAGTQIAKAEADMVLVKSNVTDVVVALDLARVVFFRIRLNFFFSIVYNFIGIPLAAGMFFPLLHRMMPPACAGLAMAFSSVSV 203
BLAST of mRNA_F-distichus_contig97103.19163.1 vs. uniprot
Match: A0A7S1CQK4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQK4_9STRA) HSP 1 Score: 180 bits (456), Expect = 2.810e-53 Identity = 99/166 (59.64%), Postives = 126/166 (75.90%), Query Frame = 1
Query: 13 RAVLALERMGLDVWMVTGDNRRVAAALARRLGVAPHRVMAEVLPAEKARKVTELQLMGGCVAMVGDGVNDAPALATADVGIAVGAGTQVAMEAADMVLVRSDVCDVVSALHLGRKVFGRIRLNFLFAMVYNLCGVPIAAGVFYPLLHVRVPPALAGLTMALSSISV 510
R V ALE MG+DVWM+TGD++ VA +A +GV+ V+A+VLPAEKARKV LQ G VAMVGDG+ND+PALA ADVGIAV +GT VA++AA++VL + VV+A+ L R VF RIRLN ++A+ YN G+P+AAG +PLL +RVPP AGL MALSS+SV
Sbjct: 93 RTVAALEAMGIDVWMLTGDSKVVADVVAEEVGVS--HVLAQVLPAEKARKVAALQAAGHVVAMVGDGINDSPALAQADVGIAVASGTNVAVDAAEIVLANPSLTAVVTAIDLARVVFRRIRLNLVWALGYNCVGIPLAAGALFPLLALRVPPMFAGLAMALSSVSV 256
BLAST of mRNA_F-distichus_contig97103.19163.1 vs. uniprot
Match: B7FU10_PHATC (p1B, P type ATPase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FU10_PHATC) HSP 1 Score: 190 bits (483), Expect = 3.500e-53 Identity = 97/158 (61.39%), Postives = 125/158 (79.11%), Query Frame = 1
Query: 37 MGLDVWMVTGDNRRVAAALARRLGVAPHRVMAEVLPAEKARKVTELQLMGGCVAMVGDGVNDAPALATADVGIAVGAGTQVAMEAADMVLVRSDVCDVVSALHLGRKVFGRIRLNFLFAMVYNLCGVPIAAGVFYPLLHVRVPPALAGLTMALSSISV 510
+G+D+WMVTGDN R A A++R+LG+AP+RV++E LPA K +KV +LQ G VAMVGDGVND+PALA ADVG++VG G +A EA+DMVLV++ V DV ALHL R +F RI+LN L ++VYN G+PIAAG+FYP + R+PP +A L MALSSISV
Sbjct: 713 LGVDIWMVTGDNSRTAKAISRKLGLAPNRVISEALPAAKVQKVRQLQAEGRVVAMVGDGVNDSPALAQADVGMSVGTGADIAAEASDMVLVKAHVTDVCVALHLSRVIFRRIQLNLLLSLVYNCLGIPIAAGLFYPYVRTRLPPTVAALAMALSSISV 870
BLAST of mRNA_F-distichus_contig97103.19163.1 vs. uniprot
Match: D8LTL7_ECTSI (Heavy metal translocating P-type ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL7_ECTSI) HSP 1 Score: 191 bits (485), Expect = 3.600e-53 Identity = 107/165 (64.85%), Postives = 129/165 (78.18%), Query Frame = 1
Query: 7 SRRAVLALERMGLDVWMVTGDNRRVAAALARRLGVAPHRVMAEVLPAEKARKVTELQLMGGCVAMVGDGVNDAPALATADVGIAVGAGTQVAMEAADMVLVRSDVCDVVSALHLGRKVFGRIRLNFLFAMVYNLCGVPIAAGVFYPLLHVRVPPALAGLTMALSS 501
+R AV L RMG+ VW+VTGDNR A A+A +G+ +VMA VLPA+K+RKV ELQ MG VAMVGDGVND+PALA ADVGIAVGAGTQVA+EAADMVLVRSD+ DVV +LHL R VF RIR+NF++A+ YN+ +P+AAG+ P L + V PALA L MA SS
Sbjct: 1126 AREAVGTLHRMGISVWVVTGDNRATAEAVAAIVGIPRGKVMAGVLPADKSRKVQELQRMGQAVAMVGDGVNDSPALAMADVGIAVGAGTQVAVEAADMVLVRSDLRDVVVSLHLSRAVFRRIRMNFVWALSYNVVALPLAAGLLKPWLGLGVTPALAALFMASSS 1290 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig97103.19163.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig97103.19163.1 >prot_F-distichus_contig97103.19163.1 ID=prot_F-distichus_contig97103.19163.1|Name=mRNA_F-distichus_contig97103.19163.1|organism=Fucus distichus monoicous|type=polypeptide|length=170bp QGSRRAVLALERMGLDVWMVTGDNRRVAAALARRLGVAPHRVMAEVLPAEback to top mRNA from alignment at F-distichus_contig97103:19..2183+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig97103.19163.1 ID=mRNA_F-distichus_contig97103.19163.1|Name=mRNA_F-distichus_contig97103.19163.1|organism=Fucus distichus monoicous|type=mRNA|length=2165bp|location=Sequence derived from alignment at F-distichus_contig97103:19..2183+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig97103:19..2183+ >mRNA_F-distichus_contig97103.19163.1 ID=mRNA_F-distichus_contig97103.19163.1|Name=mRNA_F-distichus_contig97103.19163.1|organism=Fucus distichus monoicous|type=CDS|length=1020bp|location=Sequence derived from alignment at F-distichus_contig97103:19..2183+ (Fucus distichus monoicous)back to top |