mRNA_F-distichus_contig96912.19141.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig96912.19141.1 vs. uniprot
Match: D7FKB4_ECTSI (B30.2/SPRY domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB4_ECTSI) HSP 1 Score: 112 bits (280), Expect = 2.470e-27 Identity = 53/70 (75.71%), Postives = 58/70 (82.86%), Query Frame = 1
Query: 1 SFGPGDVIGCGLDYSVGDDSADIFFTINGSRYLGG--AFHGVRGSFYPTVGIDSACPVRINLGAEPFEFD 204
SFG GDV+GCGLDYSVG D+ADIFFT+NG GG AF GVRG+FYPTVG+DSACPVRINLG EPF D
Sbjct: 548 SFGAGDVVGCGLDYSVGGDAADIFFTLNGELLNGGSAAFRGVRGTFYPTVGVDSACPVRINLGEEPFRLD 617
BLAST of mRNA_F-distichus_contig96912.19141.1 vs. uniprot
Match: A0A835ZEA9_9STRA (B30.2/SPRY domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEA9_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 4.470e-19 Identity = 51/70 (72.86%), Postives = 54/70 (77.14%), Query Frame = 1
Query: 1 SFGPGDVIGCGLDYSVGDD-SADIFFTINGSRYLGGAFHGVR-GSFYPTVGIDSACPVRINLG-AEPFEF 201
+FG GDV+GCGLDYS G ADIFFT+NG RYLG AF GVR G YPTVGIDSA PVRINLG A PF F
Sbjct: 1342 TFGRGDVVGCGLDYSHGGGVCADIFFTLNG-RYLGVAFAGVRAGGLYPTVGIDSAAPVRINLGGAAPFAF 1410
BLAST of mRNA_F-distichus_contig96912.19141.1 vs. uniprot
Match: A0A7S0CWD3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CWD3_9EUKA) HSP 1 Score: 71.2 bits (173), Expect = 2.390e-13 Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 1 SFGPGDVIGCGLDYSVGDDSADIFFTINGSRYLGGAFHGVR-GSFYPTVGIDSACPVRINLGAE-PFEF 201
+FGPGDV+GCG+DY+ + IFFT NG+ +LG AF V G +YP VG+D+ CP R+N G PFEF
Sbjct: 109 AFGPGDVVGCGIDYT----NRSIFFTKNGA-FLGVAFEDVLPGHYYPVVGVDTRCPFRVNFGINRPFEF 172
BLAST of mRNA_F-distichus_contig96912.19141.1 vs. uniprot
Match: A0A4D9CNA6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNA6_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 7.490e-13 Identity = 40/81 (49.38%), Postives = 47/81 (58.02%), Query Frame = 1
Query: 4 FGPGDVIGCGLDYSVGDDSADIFFTINGSRYLGGAFH--------------GVRGSFYPTVGIDSACPVRINLGAEPFEFD 204
+GPGDV+GCGLDY S +IFFT+NG YLG AF + YPTVGIDS PV++N G EPF FD
Sbjct: 601 YGPGDVVGCGLDYR----SKEIFFTLNG-EYLGVAFKVGEEGXXXXXXXXXXAKAPLYPTVGIDSLHPVQLNFGEEPFVFD 676
BLAST of mRNA_F-distichus_contig96912.19141.1 vs. uniprot
Match: A0A7S1YBN1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YBN1_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 6.620e-12 Identity = 39/73 (53.42%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 1 SFGPGDVIGCGLDYSVGDDSADIFFTINGSRYLGGAFHGV----RGSFYPTVGIDSACPVRINLGA-EPFEFD 204
SFG GDV+GCG+DYS + IFFT+NG ++LG + + R YPTVGID+ CPV N G EPFEFD
Sbjct: 477 SFGQGDVVGCGVDYS----NNGIFFTLNG-KFLGYGWVNLQELSRLELYPTVGIDTNCPVHTNFGTTEPFEFD 544
BLAST of mRNA_F-distichus_contig96912.19141.1 vs. uniprot
Match: A0A7S2MZU7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MZU7_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 2.310e-11 Identity = 36/73 (49.32%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 1 SFGPGDVIGCGLDYSVGDDSADIFFTINGSRYLGGAFHGV-----RGSFYPTVGIDSACPVRINLGAEPFEFD 204
+FG D +GCG+DYS S IFFT NG +LG AF + G YPTVG+D+ CP+ IN G +PFEF+
Sbjct: 163 TFGVYDTVGCGIDYS----SKSIFFTRNG-EFLGFAFAELDDSVLEGGLYPTVGVDTNCPLFINFGEKPFEFN 230
BLAST of mRNA_F-distichus_contig96912.19141.1 vs. uniprot
Match: K0SCU3_THAOC (B30.2/SPRY domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SCU3_THAOC) HSP 1 Score: 67.0 bits (162), Expect = 2.320e-11 Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 4 FGPGDVIGCGLDYSVGDDSADIFFTINGSRYLGGAFHGV-----RGSFYPTVGIDSACPVRINLGAEPFEF 201
FGPGD +GCGLDY+ S IFF NG +LG AF V + YPTVG+DS CP+ +N G PF+F
Sbjct: 637 FGPGDNVGCGLDYA----SRRIFFCKNG-EFLGHAFDRVDERMIKAGLYPTVGLDSECPIFVNYGFRPFKF 702
BLAST of mRNA_F-distichus_contig96912.19141.1 vs. uniprot
Match: A0A7S0K7F3_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K7F3_CAFRO) HSP 1 Score: 63.2 bits (152), Expect = 7.170e-11 Identity = 41/81 (50.62%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 1 SFGPGDVIGCGLDY-------SVGDDS--ADIFFTINGSRYLGGAFHGVRGS--FYPTVGIDSACPVRINLGA---EPFEF 201
+FGPGDV+GCGLD S G DS A IFFT+NG R +G AF V + ++P VGID PVR+N G+ EPF F
Sbjct: 9 AFGPGDVVGCGLDTLPCLPTDSRGFDSSAARIFFTLNG-RMVGYAFEAVDAARRWHPVVGIDGPAPVRVNFGSDAREPFAF 88
BLAST of mRNA_F-distichus_contig96912.19141.1 vs. uniprot
Match: A0A7S4S3F7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S3F7_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.510e-10 Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 1 SFGPGDVIGCGLDYSVGDDSADIFFTINGSRYLGGAF-----HGVRGSFYPTVGIDSACPVRINLGAEPFEFD 204
+FG D +GCG+DY +FFT+NG ++L AF +R YPTVG+D+ CP+ IN G +PFEFD
Sbjct: 632 TFGVNDTVGCGIDYKA----KSVFFTLNG-KFLVFAFTQLSVSTLRKGLYPTVGVDTNCPLFINFGEKPFEFD 699
BLAST of mRNA_F-distichus_contig96912.19141.1 vs. uniprot
Match: A0A7S4S4K4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S4K4_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.520e-10 Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 1 SFGPGDVIGCGLDYSVGDDSADIFFTINGSRYLGGAF-----HGVRGSFYPTVGIDSACPVRINLGAEPFEFD 204
+FG D +GCG+DY +FFT+NG ++L AF +R YPTVG+D+ CP+ IN G +PFEFD
Sbjct: 705 TFGVNDTVGCGIDYKA----KSVFFTLNG-KFLVFAFTQLSVSTLRKGLYPTVGVDTNCPLFINFGEKPFEFD 772 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96912.19141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig96912.19141.1 >prot_F-distichus_contig96912.19141.1 ID=prot_F-distichus_contig96912.19141.1|Name=mRNA_F-distichus_contig96912.19141.1|organism=Fucus distichus monoicous|type=polypeptide|length=68bp SFGPGDVIGCGLDYSVGDDSADIFFTINGSRYLGGAFHGVRGSFYPTVGIback to top mRNA from alignment at F-distichus_contig96912:1664..2164- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig96912.19141.1 ID=mRNA_F-distichus_contig96912.19141.1|Name=mRNA_F-distichus_contig96912.19141.1|organism=Fucus distichus monoicous|type=mRNA|length=501bp|location=Sequence derived from alignment at F-distichus_contig96912:1664..2164- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig96912:1664..2164- >mRNA_F-distichus_contig96912.19141.1 ID=mRNA_F-distichus_contig96912.19141.1|Name=mRNA_F-distichus_contig96912.19141.1|organism=Fucus distichus monoicous|type=CDS|length=408bp|location=Sequence derived from alignment at F-distichus_contig96912:1664..2164- (Fucus distichus monoicous)back to top |