mRNA_F-distichus_contig9688.19136.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig9688.19136.1
Unique NamemRNA_F-distichus_contig9688.19136.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig9688.19136.1 vs. uniprot
Match: A0A6H5KT48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT48_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 2.560e-105
Identity = 226/443 (51.02%), Postives = 260/443 (58.69%), Query Frame = 3
Query:    6 ERGLPTRTSTSQRESFRRL------------------ESSLLVAEWTMNG------------------------GGEQNDRDGDAVSDI---VKAEILALEATELLPGNPQPWQALAEARQARGAMKASEAEDAWVNALDRLEEAWKL----GSGLVPP---LRVYVRLGALQNTLGKTKEAK---------------------ACFLRGCRAWRAPGPWLGCGIACLRLEQWEEAEDALQHASRLDCNSPLVWGHLALLLLSSQGEDRLAEADRALSQALRLGLSDASLLREIGNCYVAIDRLEDAENALRLSLSADVHSNHGPDLDPAAKGSSIRKGDGNPHTRRRLADVLSARNSSSQ------------------------------AVEEYWRVLESPSVD--ESERHEVLVRCGNLLRKIGREDELDKLRDAFPSSR 1019
            ERGL  RT T+ RES RRL                  ++S ++A   ++G                        G E+     D ++ +   V AE LA EA EL PG+P+PWQALAEA  A+G +KA+EA DAW   LDR E AW+     G    PP   LRVY+RLG+L NTLG+ +EAK                     ACFLR CRAWRAPGPWLGCG ACLRLEQW+EAEDALQHASRLDCNSPLVWGHLALLLLS  GE RL EADRALSQAL LGL+D+SLLREIGNCYVA+ RL+ AE ALR SL+ADV+S HG               +GNPHTRR L DVLSARNS+SQ                              AVEEY RVLESPS D  +SER EVL RCGNLLRK+GR DE+D+L      SR
Sbjct:  999 ERGLSIRTPTALRESCRRLKCYLILADEATAAVAADRDNSNIIASTVVSGKAGSRTNEAAQAAAPAPAAAGKASGDEKQTSASDGMAMVPGAVDAERLAQEAVELSPGDPRPWQALAEACDAQGLIKATEAADAWAAVLDRTETAWRTSPASGEEATPPTPALRVYMRLGSLYNTLGRIEEAKVGKGAYNSVGPVNFEYAAVVKACFLRACRAWRAPGPWLGCGAACLRLEQWQEAEDALQHASRLDCNSPLVWGHLALLLLS-MGEGRLQEADRALSQALCLGLADSSLLREIGNCYVAVGRLDAAEEALRKSLAADVNS-HG--------------NNGNPHTRRCLGDVLSARNSTSQLALSLSQSGKLPKHQSMLVTDDWSTSCPCQAVEEYRRVLESPSADVNDSEREEVLTRCGNLLRKMGRGDEIDQLHQEALFSR 1425          
BLAST of mRNA_F-distichus_contig9688.19136.1 vs. uniprot
Match: D8LNE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNE3_ECTSI)

HSP 1 Score: 345 bits (886), Expect = 2.150e-103
Identity = 223/468 (47.65%), Postives = 259/468 (55.34%), Query Frame = 3
Query:    6 ERGLPTRTSTSQRESFRRLESSLLVAEWTM--------------------NGGGEQN--------------------DRDGDAVSDI-------VKAEILALEATELLPGNPQPWQALAEARQARGAMKASEAEDAWVNALDRLEEAWKLGSGL-------VPPLRVYVRLGALQNTLGKTKEAKACFLRGCRAWRAPGPWLGCGIACLRLEQWEEAEDALQHASRLDCNSPLVWGHLALLLLSSQGEDRLAEADRALSQALRLGLSDASLLREIGNCYVAIDRLEDAENALRLSLSADVHSNHGPDLDPAAKGSSIRKGDGNPHTRRRLADVLSARNSSSQ--------------------------------------------------------------------------AVEEYWRVLESPSVD--ESERHEVLVRCGNLLRKIGREDELDKLRDAFPSSR 1019
            ERGL  RT ++ RES RRL+  L++A+                        GG   N                    D+   + S++       V AE LA EA EL PG+P+PWQALAEA  A+G +KA+EA DAW   LDR+E AW+  S          PPLRVY+RLG+L NTLG+ +EAKACFLR CRAWRAPGPWLGCG AC+RLEQW+EAEDA+QHASRLDCNS LVWGHLALLLLS  GEDRL EADRALSQAL LGL+D+SLLREIGNCYVA  RL+ AE ALR SL+ADV+S HG                GNPHTRR L DVLSARNS+SQ                                                                          AV+EY RVLESPS D  +SER EVL+RCGNLLRK+GR DE+D+L      SR
Sbjct: 1052 ERGLSVRTPSALRESSRRLKCYLILADAATAAIAADPDNSNTIASAALPGKGGSRPNEDAAIQAAEPAPAALGKAFGDQKQGSASEVMAMVYCAVDAERLAQEAVELSPGDPRPWQALAEACDAQGLIKATEAADAWAAVLDRMETAWRTSSASGEEPTSPTPPLRVYMRLGSLYNTLGRVEEAKACFLRACRAWRAPGPWLGCGAACMRLEQWQEAEDAMQHASRLDCNSSLVWGHLALLLLS-MGEDRLQEADRALSQALCLGLADSSLLREIGNCYVAAGRLDAAEEALRKSLAADVNS-HG--------------NSGNPHTRRCLGDVLSARNSTSQVRAYLVALKVSVVQCPRCLHPLLVKKSDVILLIRYTPLTGTRPRSTSAKQQHAPSNKHQSMLVTNEWPMTCPCQAVQEYRRVLESPSTDVNDSEREEVLMRCGNLLRKMGRGDEIDQLHQEALFSR 1503          
BLAST of mRNA_F-distichus_contig9688.19136.1 vs. uniprot
Match: A0A835YIA9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA9_9STRA)

HSP 1 Score: 189 bits (479), Expect = 9.950e-49
Identity = 141/333 (42.34%), Postives = 172/333 (51.65%), Query Frame = 3
Query:    6 ERGLPTRTSTSQRESFRRLESSLLVAEWTMNGGGEQNDRDGDAVSDIVKAEILALEATELLPGNPQPWQALAEARQARGAMKASEAEDAWVNALDRLEEAWKLGSGLVPPLRVYVRLGALQNTLGKTKEAKACFLRGCRAWRAPGPWLGCGIACLRLEQWEEAEDALQHASRLDCNSPLVWGHLALLLLSSQGEDRLAEADRALSQALRLGLSDASLLREIGNCYVAIDRLEDAENALRLSLSADVHSNHGPDLDPAAKGSSIRKGDGNPHTRRRLADVLSARNSSSQAVEEYWRVLESPSVDESERHEVLVRCGNLLRKIGREDELDKLRDA 1004
            ERGLP    T+QR +  RL+S+L  A               D        E   L A EL P +   W ALA A   R A    E  +A   AL     A + G     PL  + RLGAL   LG+  E+KA +L G R W  P  WLG G+A + LEQWEEAE ALQ A+RLD   P VWG LALLLL+ QG+ R AE               A+LLR++GN +V++DRL  AE+ LR +LS +            A GSS   G G  H RRRLADVLSA+N  + AV EY  VL S     +ER E L RC  LL+ +GRE EL + R A
Sbjct:  851 ERGLPPAAGTAQRATLLRLDSALRAAAAA-----------NDVXXXXXXVESAQL-AAELEPRSAAAWGALAAAL--RAARYPVEEAEALAAALACCSSAQERG-----PLAQHARLGALNLALGRPAESKAAWLGGAREWHVPSVWLGAGVAAMELEQWEEAEAALQQANRLDNADPAVWGTLALLLLA-QGDARAAEXXXXXXXXXXXXXXXAALLRKLGNAFVSVDRLARAEDMLRRALSRET-----------AAGSS---GAG-AHVRRRLADVLSAQNCVAAAVGEYREVLLSTDAPAAERQEALSRCAPLLKALGREAELREWRAA 1148          
BLAST of mRNA_F-distichus_contig9688.19136.1 vs. uniprot
Match: A0A7S2C013_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C013_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.830e-47
Identity = 129/347 (37.18%), Postives = 182/347 (52.45%), Query Frame = 3
Query:    3 QERGLPTRTSTSQRESFRRLESSLLVAEWTMNGGGEQNDRDGDAVSDIVKAEILALEATELLPGNPQPWQALAEARQARGAMKASEAEDAWVNALDRLEEAWK--------LGSGLVPP-------LRVYVRLGALQNTLGKTKEAKACFLRGCRAWRAPGPWLGCGIACLRLEQWEEAEDALQHASRLDCNSPLVWGHLALLLLSSQGEDRLAEADRALSQALRLGLSDASLLREIGNCYVAIDRLEDAENALRLSLSADVHSNHGPDLDPAAKGSSIRKGDGNPHTRRRLADVLSARNSSSQAVEEYWRVLESPSVDESERHEVLVRCGNLLRKIGREDELDKLR 998
            ++RGL        ++  +RL ++LL+ E      G Q D           A+  A  AT L P +   WQ L +   A GA++  EA  A++ AL  L    K        +GS   PP       LR++VRLG L   LG+   A+  FL+GC  W+    WLG GIA LRL+Q +E+EDAL  A+  +   P+VWG +AL  L+   + R+ +AD+++ QA RLGL+DA+LLRE+ N Y A+D LE AE   R SL+ +          P+A            HTRRRLADVLSA+NS + AV EY  V+E+ + D  E       C  LL  +GR +E+ +L+
Sbjct:    7 EDRGLVDAMPAWLKQREKRLTAALLLLE-----DGSQTD----------PAQSEAFAATTLDPEDGVAWQGLGDIHYASGAVE--EAVSAYIKALSLLSAKPKPTAARSMIVGSAGAPPEVPPPPPLRLFVRLGTLMLQLGRNDAARGVFLQGCDTWQTCSMWLGAGIALLRLDQLKESEDALMEANVRNNKDPVVWGFVALACLARGDKVRVDQADKSIVQANRLGLTDAALLRELANSYTALDLLESAEALFRRSLACE----------PSA------------HTRRRLADVLSAQNSLAAAVNEYKAVIEA-NEDPQEMALAAGECEKLLVALGRSEEVPQLQ 313          
BLAST of mRNA_F-distichus_contig9688.19136.1 vs. uniprot
Match: A0A7S2GGG8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GGG8_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.460e-45
Identity = 119/302 (39.40%), Postives = 161/302 (53.31%), Query Frame = 3
Query:  141 DIVKAEILALEATELLPGNPQPWQALAEARQARGAMKASEAEDAWVNALDRLEEAWKLGSGLV----------------PPLRVYVRLGALQNTLGKTKEAKACFLRGCRAWRAPGPWLGCGIACLRLEQWEEAEDALQHASRLDCNSPLVWGHLALLLLSSQGEDRLAEADRALSQALRLGLSDASLLREIGNCYVAIDRLEDAENALRLSLSADVHSNHGPDLDPAAKGSSIRKGDGNPHTRRRLADVLSARNSSSQAVEEYWRVLESPSVDESERHEVLVRCGNLLRKIGREDELDKLR 998
            D  +A  LA  AT + P + + W  LA+     G ++AS    A   AL  L +    GS                   PPLR+YVRLG L   L + +EA   FL+GC  W+    WLG GI+ LRL ++EEAE +L  A+ ++   P+VWG++ LL L    + R++EA  AL++A RL L DASLLREIGN Y+A+D LE AE+ LR SL+ D          P+A            HTRRRLADVLSA+NS   AV  Y  V+ + + D+ E    +  C   L  +GR DE+ +LR
Sbjct:  236 DDERAVSLASVATSMDPSDGEAWLVLADCEMCGGHVEASTV--ACAKALTCLRKEADTGSATTDSLKNSDIGPSDKSDRPPLRLYVRLGFLYIQLSRYQEASDVFLQGCSVWQTCSVWLGAGISLLRLNKFEEAEVSLMEANMVNGAHPVVWGYICLLCLCCGDDSRISEAHAALTEAKRLKLQDASLLREIGNAYMAVDLLETAEDVLRRSLACD----------PSA------------HTRRRLADVLSAQNSLVAAVNVYREVI-ATAADKEEVELAIASCEKHLTALGRNDEIIQLR 512          
BLAST of mRNA_F-distichus_contig9688.19136.1 vs. uniprot
Match: A0A7S2XZC4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZC4_9STRA)

HSP 1 Score: 152 bits (384), Expect = 7.170e-41
Identity = 89/184 (48.37%), Postives = 114/184 (61.96%), Query Frame = 3
Query:  444 WLGCGIACLRLEQWEEAEDALQHASRLDCNSPLVWGHLALLLLSSQGEDRLAEADRALSQALRLGLSDASLLREIGNCYVAIDRLEDAENALRLSLSADVHSNHGPDLDPAAKGSSIRKGDGNPHTRRRLADVLSARNSSSQAVEEYWRVLESPSVDESERHEVLVRCGNLLRKIGREDELDKL 995
            WLG G+ACLRL Q E+AE+ALQ A+ LD  +  +WG+L+LL L   GEDRL  A++ L QALR  L D  LLRE+G  Y+AIDRLE AE+  R SL              A +G       GNP TRR LADVL+A+N  + AVE+Y  V+   S DE E+ E    C  LL+K+GR+DE+D +
Sbjct:    1 WLGAGVACLRLNQLEDAEEALQEANLLDHRNATIWGYLSLLSLM-HGEDRLEHANKTLEQALRFELDDPVLLRELGVSYMAIDRLEVAESLFRQSL--------------AQEG-------GNPRTRRMLADVLAAQNMGAAAVEDYKTVIFDASADEEEKQEAFSNCVALLKKLGRQDEIDTI 162          
BLAST of mRNA_F-distichus_contig9688.19136.1 vs. uniprot
Match: A0A1V9ZZC2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZC2_9STRA)

HSP 1 Score: 137 bits (344), Expect = 4.560e-31
Identity = 96/223 (43.05%), Postives = 127/223 (56.95%), Query Frame = 3
Query:  336 LRVYVRLGALQNTLGKTKEAKACFLRGCRAWRAPGPWLGCGIACLRLEQWEEAEDALQHASRLDCNSPLVWGHLALLLLSSQGEDRLAEADRALSQALRLGLSDASLLREIGNCYVAIDRLEDAENALRLSLSADVHSNHGPDLDPAAKGSSIRKGDGNPHTRRRLADVLSARNSSSQAVEEYWRVL-ESPSVDESERHEVLVRCGNLLRKIGREDELDKLRD 1001
            L +++ LGAL     +  EAKA FL  C        WLG G+ C+R E WE AE AL  A+ LD  +  VWG+L L  L S    R  +AD+AL QALR  L++++LLREIGN YVA+++LE AE  LR SL   VH +           SS+        TR+ LADVLSA+N +  A+ EY R L    S+DE  R E+L +C  LL  IGR +E ++ R+
Sbjct:  851 LPLHLHLGALYMHHQQWSEAKAIFLNSCEEASNASSWLGVGVVCIRQEDWEGAEMALAEANILDNTNAEVWGYLTLACLHSF-PPRPEQADQALEQALRYELANSTLLREIGNGYVALEKLETAEGLLRRSL---VHGD-----------SSL--------TRKTLADVLSAQNCAETALIEYQRALARCESMDE--RAELLSKCVGLLETIGRFEEANEYRE 1048          
BLAST of mRNA_F-distichus_contig9688.19136.1 vs. uniprot
Match: A0A812Z0H8_SYMMI (Cfap70 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Z0H8_SYMMI)

HSP 1 Score: 128 bits (322), Expect = 7.980e-31
Identity = 76/209 (36.36%), Postives = 122/209 (58.37%), Query Frame = 3
Query:  333 PLRVYVRLGALQNTLGKTKEAKACFLRGCRAWRAPGPWLGCGIACLRLEQWEEAEDALQHASRLDCNSPLVWGHLALLLLSSQGEDRLAEADRALSQALRLGLSDASLLREIGNCYVAIDRLEDAENALRLSLSADVHSNHGPDLDPAAKGSSIRKGDGNPHTRRRLADVLSARNSSSQAVEEYWRVLESPSVDESERHEVLVRCGNLL 959
            PL  YV  G    + G+ ++A    L GCR + +   +   GI CLR+++  +AEDALQ A+ +D  +P VW +LA+L L + G+ R+ EA+R+  QALRLGL+++++LREI   ++++D+L  AE  +R S+++D+        D A K +S        HTRR L D+L+ +N + +A+EEY  V+     D   R     +C +LL
Sbjct:   57 PLADYVEAGKALLSTGRFEDALDVMLLGCRVYPSSTLFNLVGICCLRVDRMVDAEDALQEANLIDNRNPEVWAYLAILCLHT-GDHRMEEAERSCEQALRLGLNNSAILREIAMAFISVDKLRTAEELVRRSMASDL-------ADGAPKPNS--------HTRRLLGDILAGQNQAVEAIEEYQSVIGDEDADLETRLLAGEKCSDLL 249          
BLAST of mRNA_F-distichus_contig9688.19136.1 vs. uniprot
Match: A0A485LH67_9STRA (Aste57867_20828 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LH67_9STRA)

HSP 1 Score: 136 bits (342), Expect = 8.450e-31
Identity = 90/223 (40.36%), Postives = 131/223 (58.74%), Query Frame = 3
Query:  336 LRVYVRLGALQNTLGKTKEAKACFLRGCRAWRAPGPWLGCGIACLRLEQWEEAEDALQHASRLDCNSPLVWGHLALLLLSSQGEDRLAEADRALSQALRLGLSDASLLREIGNCYVAIDRLEDAENALRLSLSADVHSNHGPDLDPAAKGSSIRKGDGNPHTRRRLADVLSARNSSSQAVEEYWRVLES-PSVDESERHEVLVRCGNLLRKIGREDELDKLRD 1001
            L +Y++LGAL     +   AK+ FLR C        WLG G+ C+R + W+ AE AL  A+ LD  +P VWG+L+L+ LS+    R  EA++AL QALR  LS+A+LLRE+ N +VA+DRLE AE+ LR SL                  SS+        TR+ LADVL+A+N +S A+++Y + L+   S+D+  R  +L +C +LL  +GR DE  + R+
Sbjct:  909 LPLYLQLGALYMHHQQWGPAKSIFLRACHETSVASSWLGVGVVCVRQDDWDGAEMALAEANILDHTNPDVWGYLSLVCLSATPA-RQKEAEQALEQALRYDLSNATLLRELSNGFVALDRLEVAESLLRRSL--------------LTGDSSL--------TRKTLADVLAAQNCASTALDQYKKALDGCTSMDD--RTTLLGQCADLLSTLGRLDEAKEYRE 1106          
BLAST of mRNA_F-distichus_contig9688.19136.1 vs. uniprot
Match: A0A024TFN1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TFN1_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.750e-30
Identity = 95/239 (39.75%), Postives = 133/239 (55.65%), Query Frame = 3
Query:  285 LDRLEEAWKLGSGLVPPLRVYVRLGALQNTLGKTKEAKACFLRGCRAWRAPGPWLGCGIACLRLEQWEEAEDALQHASRLDCNSPLVWGHLALLLLSSQGEDRLAEADRALSQALRLGLSDASLLREIGNCYVAIDRLEDAENALRLSLSADVHSNHGPDLDPAAKGSSIRKGDGNPHTRRRLADVLSARNSSSQAVEEYWRVLESPSVDESERHEVLVRCGNLLRKIGREDELDKLRD 1001
            +D+L + ++L      PL  +++LGAL     +   AKA FLR C        WLG G+  +R + WE AE AL  A+ LD  +  VWG+L L+ L++    RL EA++AL QALR GL + +LLRE+ N +VA D+LE AE+ LR SL                  SSI        TR+ LADVL+A+N +S A+E+Y + LE      SER  +L +C NLL  +GR +E  + RD
Sbjct:  867 IDKLHDMYRL------PL--FLQLGALYMHHQQWGPAKAIFLRACHETTVASAWLGVGVVSVRQDDWEGAEMALAEANILDRTNADVWGYLTLVCLNAT-PPRLKEAEQALEQALRYGLENTTLLRELSNGFVAQDKLEVAESLLRRSL--------------LTGDSSI--------TRKTLADVLAAQNCASTALEQYKKALEGCDAM-SERATLLNQCANLLSTLGRLEEAKEYRD 1073          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9688.19136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT48_9PHAE2.560e-10551.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNE3_ECTSI2.150e-10347.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YIA9_9STRA9.950e-4942.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2C013_9STRA2.830e-4737.18Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2GGG8_9STRA1.460e-4539.40Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2XZC4_9STRA7.170e-4148.37Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1V9ZZC2_9STRA4.560e-3143.05Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A812Z0H8_SYMMI7.980e-3136.36Cfap70 protein (Fragment) n=1 Tax=Symbiodinium mic... [more]
A0A485LH67_9STRA8.450e-3140.36Aste57867_20828 protein n=1 Tax=Aphanomyces stella... [more]
A0A024TFN1_9STRA2.750e-3039.75Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9688contigF-distichus_contig9688:522..3231 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score344.7
Seed ortholog evalue4.5e-92
Seed eggNOG ortholog2880.D8LNE3
Hectar predicted targeting categoryother localisation
EggNOG OGs2CMXF@1,2QSJ2@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1304
Cds size960
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931146.700208-UTR-F-distichus_contig9688:521..6131622931146.700208-UTR-F-distichus_contig9688:521..613Fucus distichus monoicousUTRF-distichus_contig9688 522..613 +
1690886178.4176404-UTR-F-distichus_contig9688:521..6131690886178.4176404-UTR-F-distichus_contig9688:521..613Fucus distichus monoicousUTRF-distichus_contig9688 522..613 +
1622931146.822529-UTR-F-distichus_contig9688:2979..32311622931146.822529-UTR-F-distichus_contig9688:2979..3231Fucus distichus monoicousUTRF-distichus_contig9688 2980..3231 +
1690886178.481725-UTR-F-distichus_contig9688:2979..32311690886178.481725-UTR-F-distichus_contig9688:2979..3231Fucus distichus monoicousUTRF-distichus_contig9688 2980..3231 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931146.723053-CDS-F-distichus_contig9688:613..7611622931146.723053-CDS-F-distichus_contig9688:613..761Fucus distichus monoicousCDSF-distichus_contig9688 614..761 +
1690886178.4294343-CDS-F-distichus_contig9688:613..7611690886178.4294343-CDS-F-distichus_contig9688:613..761Fucus distichus monoicousCDSF-distichus_contig9688 614..761 +
1622931146.7420728-CDS-F-distichus_contig9688:1072..12301622931146.7420728-CDS-F-distichus_contig9688:1072..1230Fucus distichus monoicousCDSF-distichus_contig9688 1073..1230 +
1690886178.4396791-CDS-F-distichus_contig9688:1072..12301690886178.4396791-CDS-F-distichus_contig9688:1072..1230Fucus distichus monoicousCDSF-distichus_contig9688 1073..1230 +
1622931146.7656693-CDS-F-distichus_contig9688:1364..15581622931146.7656693-CDS-F-distichus_contig9688:1364..1558Fucus distichus monoicousCDSF-distichus_contig9688 1365..1558 +
1690886178.4496434-CDS-F-distichus_contig9688:1364..15581690886178.4496434-CDS-F-distichus_contig9688:1364..1558Fucus distichus monoicousCDSF-distichus_contig9688 1365..1558 +
1622931146.7836185-CDS-F-distichus_contig9688:1940..22171622931146.7836185-CDS-F-distichus_contig9688:1940..2217Fucus distichus monoicousCDSF-distichus_contig9688 1941..2217 +
1690886178.4590905-CDS-F-distichus_contig9688:1940..22171690886178.4590905-CDS-F-distichus_contig9688:1940..2217Fucus distichus monoicousCDSF-distichus_contig9688 1941..2217 +
1622931146.8045287-CDS-F-distichus_contig9688:2796..29791622931146.8045287-CDS-F-distichus_contig9688:2796..2979Fucus distichus monoicousCDSF-distichus_contig9688 2797..2979 +
1690886178.469942-CDS-F-distichus_contig9688:2796..29791690886178.469942-CDS-F-distichus_contig9688:2796..2979Fucus distichus monoicousCDSF-distichus_contig9688 2797..2979 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9688.19136.1prot_F-distichus_contig9688.19136.1Fucus distichus monoicouspolypeptideF-distichus_contig9688 614..2979 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig9688.19136.1

>prot_F-distichus_contig9688.19136.1 ID=prot_F-distichus_contig9688.19136.1|Name=mRNA_F-distichus_contig9688.19136.1|organism=Fucus distichus monoicous|type=polypeptide|length=320bp
MNGGGEQNDRDGDAVSDIVKAEILALEATELLPGNPQPWQALAEARQARG
AMKASEAEDAWVNALDRLEEAWKLGSGLVPPLRVYVRLGALQNTLGKTKE
AKACFLRGCRAWRAPGPWLGCGIACLRLEQWEEAEDALQHASRLDCNSPL
VWGHLALLLLSSQGEDRLAEADRALSQALRLGLSDASLLREIGNCYVAID
RLEDAENALRLSLSADVHSNHGPDLDPAAKGSSIRKGDGNPHTRRRLADV
LSARNSSSQAVEEYWRVLESPSVDESERHEVLVRCGNLLRKIGREDELDK
LRDAFPSSRAHTWQDQTIP*
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mRNA from alignment at F-distichus_contig9688:522..3231+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig9688.19136.1 ID=mRNA_F-distichus_contig9688.19136.1|Name=mRNA_F-distichus_contig9688.19136.1|organism=Fucus distichus monoicous|type=mRNA|length=2710bp|location=Sequence derived from alignment at F-distichus_contig9688:522..3231+ (Fucus distichus monoicous)
CACAGGAGCGTGGCCTGCCTACCCGAACTTCGACCTCACAACGCGAATCT TTCCGTCGCCTCGAAAGCTCTCTCCTTGTTGCCGAGTGGACAATGAATGG CGGTGGTGAGCAAAACGATCGCGACGGAGATGCAGTTTCGGACATCGTCA AGGCTGAGATCCTCGCTCTGGAGGCCACCGAACTTCTTCCGGGAAATCCT CAACCTTGGCAGGCATTGGCCGAGGCGCGCCAAGCGCGAGGTCAGAATCA CCGCGAAAAGGCAGAAATGTAACGCATTATCATCTACTATTAATAATTTC AATTGATCGCAGGGACACCGAAAAAGTTGGTTGGCGGGCAACCTTGTGCT GATGTTTCCTGCTGCGTGCTTCATATTTCCTGATGAAAGTCTGGGTAATG ATGGCGGCCGGCGCTTTCGCTGAAACATTGTGGCGATGCAAGCATGATTG CCATCAATCACCGAAAAGACTTCTACTGTGACGGAAACAATTGAGCAAGT ACCTGGTCAATCGTTTTTTGAACAGATGCTTCGATTCTCTCGTCTCGTCA GGAGCAATGAAGGCTTCGGAAGCAGAGGACGCTTGGGTGAACGCGCTTGA CAGGCTTGAGGAGGCCTGGAAATTAGGATCGGGACTAGTTCCTCCGCTAC GAGTGTACGTGCGGCTTGGAGCTCTACAAAACACTCTCGGGAAAACAAAA GAAGCAAAGGTGGTGGGCACACGTTTTTTTACCAATAGTCTTCGCTCCGC GAAGAATTGAGCGTTTCACAGAAGATATAGTTCCGTGTGTCAGAATTTTC TTAGCATTTTTATCTAAACTCCGCACGCTGTGTCCAACACCAGGCCTGTT TCCTGCGAGGCTGCCGAGCTTGGAGGGCTCCCGGACCGTGGCTTGGGTGC GGTATTGCTTGCCTGCGTTTGGAGCAGTGGGAAGAAGCAGAGGATGCCTT GCAGCACGCCTCCCGTTTAGACTGCAACTCTCCCTTGGTTTGGGGCCACC TGGCCCTGCTTCTGCTGTCATCTCAGGGTGAAGACAGGTGCAGCATCTAG TTGCTTGCTCAACCATGCTCGCCATTCAGAACCTAAGATGCCGTATAAAA GAATGGACGGTCTTTACAGCTCTCAACCAACAAGTGGCGTGACCGTTCAT GGAGGCCGATATCACTCATCATTTATCGTGATGCTCTACGTGGTGTCTAC GTACGTGTGTATGCAGGACGTGTCTCCACTTCCCTCGCTCTATATTTTTC TTCATGAACAAGTTCACGATTTCAGTGGGTAAAGTGAATCCCTATCAGGC ACTAGTCACGTGGCCAATCGTAAACGAAGGCTTAATTTGAGTTGAACCGC GTAGAAAAGGGCGGGGTGTGCGTGCCATAACATACCGGCTTCTCTTTACC CCCTCGCCCTCCACGATAGGCTAGCGGAAGCGGATCGTGCCTTGTCCCAG GCTTTGCGCTTAGGCCTCTCTGACGCGTCACTCCTTCGCGAGATCGGGAA CTGCTACGTTGCGATTGATCGTCTAGAGGACGCGGAGAACGCACTGCGCT TGTCATTGTCGGCAGACGTACACAGCAACCATGGGCCGGACCTTGATCCC GCGGCGAAGGGTTCCAGTATCAGGAAAGGAGATGGCAACCCGCATACGCG TAGACGGCTCGCTGACGTGCTCTCAGCTCGTAATTCTTCAAGCCAAGTAA GTCCGCTATTCAACAGTCTTAGTGTCTTGCACAGGATTTTACACTACCAG GATGTGACCCGCTGGCATTCGTTTCGTTTTAAGATTGCGAGCGGGATATT TATGAATTTCATAGGCCTAAAGCGAAGTAATTTTCCACTTGCAATGGGCA TAACGCTGTAAGTATGAATCATCATCCTCATCAGCAACAACAAAAAATGT CCCCCGTTCCAAAAAATACCCGGTGCATTGATGGCGAGGCGTTTTTATTC CCAACCATTTTATGTATGGTCATAACATGTTGTGACAGGGATCACTCCCT GTGCCATCTATGGTCGTGTAAATGACAGCTCATCCTATTTCTTCTTGAGC ATACGCTGCAAAGCTAATGTGGTCTGTTTTGTTTGTGTTGTGCATGTATT TTTGTATATTCTTCTCGCTCTGCCGTGGATCTTACTCCCAAAAAGGTCAC CACAACGTCGAAGCGGTAAGGATCTATCCGGCTTAACCTACATCGTTCCT GACCCACACGTACGCCACCAATTCGACCCTTGATCCGCGCCACTCTTGTT TGATTCCTATTAATACCCCACCAAGGCCGTTGAAGAATATTGGCGAGTGT TAGAATCTCCTTCTGTAGACGAATCGGAGCGACATGAGGTGTTGGTTCGT TGCGGCAATCTCCTTCGCAAGATCGGTCGAGAAGACGAGCTCGATAAACT AAGGGATGCGTTTCCCTCCAGCAGGGCTCATACTTGGCAAGATCAGACTA TACCATAGAGCCAACGACAACTTCATATCTTGCCGAGAGTCGCGAACAGG TCGGCGATTTCAACAGTTTCCCGGATATCAGACATCTATAGTCTTGGCCC GTGCCATAATGTGCGTTGTAATGCGAAGGCTGCTGGACGCTAACCGCGCA GAGGACTGCAGACTTGTCACCCTCAAAACAATGTCGACAGGCCGGCGAGC TTTCTACGCGTCGCCGTCAGGTCATTTCCCTCTACAAGGACCATATCGCC GAACACGGAG
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Coding sequence (CDS) from alignment at F-distichus_contig9688:522..3231+

>mRNA_F-distichus_contig9688.19136.1 ID=mRNA_F-distichus_contig9688.19136.1|Name=mRNA_F-distichus_contig9688.19136.1|organism=Fucus distichus monoicous|type=CDS|length=1920bp|location=Sequence derived from alignment at F-distichus_contig9688:522..3231+ (Fucus distichus monoicous)
ATGAATGGCGGTGGTGAGCAAAACGATCGCGACGGAGATGCAGTTTCGGA
CATCGTCAAGGCTGAGATCCTCGCTCTGGAGGCCACCGAACTTCTTCCGG
GAAATCCTCAACCTTGGCAGGCATTGGCCGAGGCGCGCCAAGCGCGAGAT
GAATGGCGGTGGTGAGCAAAACGATCGCGACGGAGATGCAGTTTCGGACA
TCGTCAAGGCTGAGATCCTCGCTCTGGAGGCCACCGAACTTCTTCCGGGA
AATCCTCAACCTTGGCAGGCATTGGCCGAGGCGCGCCAAGCGCGAGGAGC
AATGAAGGCTTCGGAAGCAGAGGACGCTTGGGTGAACGCGCTTGACAGGC
TTGAGGAGGCCTGGAAATTAGGATCGGGACTAGTTCCTCCGCTACGAGTG
TACGTGCGGCTTGGAGCTCTACAAAACACTCTCGGGAAAACAAAAGAAGC
AAAGGAGCAATGAAGGCTTCGGAAGCAGAGGACGCTTGGGTGAACGCGCT
TGACAGGCTTGAGGAGGCCTGGAAATTAGGATCGGGACTAGTTCCTCCGC
TACGAGTGTACGTGCGGCTTGGAGCTCTACAAAACACTCTCGGGAAAACA
AAAGAAGCAAAGGCCTGTTTCCTGCGAGGCTGCCGAGCTTGGAGGGCTCC
CGGACCGTGGCTTGGGTGCGGTATTGCTTGCCTGCGTTTGGAGCAGTGGG
AAGAAGCAGAGGATGCCTTGCAGCACGCCTCCCGTTTAGACTGCAACTCT
CCCTTGGTTTGGGGCCACCTGGCCCTGCTTCTGCTGTCATCTCAGGGTGA
AGACAGGCCTGTTTCCTGCGAGGCTGCCGAGCTTGGAGGGCTCCCGGACC
GTGGCTTGGGTGCGGTATTGCTTGCCTGCGTTTGGAGCAGTGGGAAGAAG
CAGAGGATGCCTTGCAGCACGCCTCCCGTTTAGACTGCAACTCTCCCTTG
GTTTGGGGCCACCTGGCCCTGCTTCTGCTGTCATCTCAGGGTGAAGACAG
GCTAGCGGAAGCGGATCGTGCCTTGTCCCAGGCTTTGCGCTTAGGCCTCT
CTGACGCGTCACTCCTTCGCGAGATCGGGAACTGCTACGTTGCGATTGAT
CGTCTAGAGGACGCGGAGAACGCACTGCGCTTGTCATTGTCGGCAGACGT
ACACAGCAACCATGGGCCGGACCTTGATCCCGCGGCGAAGGGTTCCAGTA
TCAGGAAAGGAGATGGCAACCCGCATACGCGTAGACGGCTCGCTGACGTG
CTCTCAGCTCGTAATTCTTCAAGCCAAGCTAGCGGAAGCGGATCGTGCCT
TGTCCCAGGCTTTGCGCTTAGGCCTCTCTGACGCGTCACTCCTTCGCGAG
ATCGGGAACTGCTACGTTGCGATTGATCGTCTAGAGGACGCGGAGAACGC
ACTGCGCTTGTCATTGTCGGCAGACGTACACAGCAACCATGGGCCGGACC
TTGATCCCGCGGCGAAGGGTTCCAGTATCAGGAAAGGAGATGGCAACCCG
CATACGCGTAGACGGCTCGCTGACGTGCTCTCAGCTCGTAATTCTTCAAG
CCAAGCCGTTGAAGAATATTGGCGAGTGTTAGAATCTCCTTCTGTAGACG
AATCGGAGCGACATGAGGTGTTGGTTCGTTGCGGCAATCTCCTTCGCAAG
ATCGGTCGAGAAGACGAGCTCGATAAACTAAGGGATGCGTTTCCCTCCAG
CAGGGCTCATACTTGGCAAGATCAGACTATACCATAGGCCGTTGAAGAAT
ATTGGCGAGTGTTAGAATCTCCTTCTGTAGACGAATCGGAGCGACATGAG
GTGTTGGTTCGTTGCGGCAATCTCCTTCGCAAGATCGGTCGAGAAGACGA
GCTCGATAAACTAAGGGATGCGTTTCCCTCCAGCAGGGCTCATACTTGGC
AAGATCAGACTATACCATAG
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