mRNA_F-distichus_contig9661.19119.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig9661.19119.1 vs. uniprot
Match: D7FP44_ECTSI (Sirohydrochlorin ferrochelatase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP44_ECTSI) HSP 1 Score: 225 bits (574), Expect = 7.380e-69 Identity = 107/127 (84.25%), Postives = 119/127 (93.70%), Query Frame = 1
Query: 304 LGVIVCDHGSRRENANDMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAHKIILHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEEGAWQYG 684
+GVIVCDHGSRRENAN MLFEVAERYR+F+GF+IVEAAHMELA+PSIE+AFDRCVAAGA K++LHPFFLSPGRHVTSDIP L+ AAAK+HP V WVVSEPLGLQELMPRVMHAAVSESV GAW++G
Sbjct: 87 VGVIVCDHGSRRENANTMLFEVAERYRSFSGFEIVEAAHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPALMVAAAKRHPGVGWVVSEPLGLQELMPRVMHAAVSESVAGGAWRHG 213
BLAST of mRNA_F-distichus_contig9661.19119.1 vs. uniprot
Match: A0A836CEJ2_9STRA (CbiX-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ2_9STRA) HSP 1 Score: 139 bits (351), Expect = 9.160e-37 Identity = 70/118 (59.32%), Postives = 89/118 (75.42%), Query Frame = 1
Query: 355 MLFEVAERYR--------AFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAHKIILHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEEGAWQYG 684
M+ EVA R+R A A ++E AHMELA+P+IEQAFD+CVAAGA ++LHPFFLSPGRHV+SDIP L+AAAA +HP V W VSEPLGL LMP++M+ AV+ +++E WQ G
Sbjct: 1 MINEVAARFRQQAEASEAAAAAACVIEVAHMELAEPTIEQAFDKCVAAGAKAVVLHPFFLSPGRHVSSDIPELLAAAASRHPGVKWKVSEPLGLAPLMPQLMNDAVAAALQEPEWQGG 118
BLAST of mRNA_F-distichus_contig9661.19119.1 vs. uniprot
Match: A0A350CGA9_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A350CGA9_9PLAN) HSP 1 Score: 136 bits (342), Expect = 2.100e-35 Identity = 64/119 (53.78%), Postives = 88/119 (73.95%), Query Frame = 1
Query: 307 GVIVCDHGSRRENANDMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAHKIILHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVE 663
G+++ DHGSRR +N +L A+R+ ++G+ IVE AHMELA+PSI+QAFDRCVA GA +I++ P+FLSPGRH T DIPGL+ AA HPEV W+V+ P GL + + + AVSE ++
Sbjct: 9 GLLIVDHGSRRAESNQLLHHAADRFARYSGWQIVEPAHMELAEPSIQQAFDRCVARGARRIVVFPWFLSPGRHWTEDIPGLVEQAAAVHPEVQWLVTPPFGLHQGLLQ----AVSERID 123
BLAST of mRNA_F-distichus_contig9661.19119.1 vs. uniprot
Match: A0A518C237_9BACT (Sirohydrochlorin cobaltochelatase n=2 Tax=Bremerella TaxID=2714594 RepID=A0A518C237_9BACT) HSP 1 Score: 136 bits (343), Expect = 2.510e-35 Identity = 68/128 (53.12%), Postives = 86/128 (67.19%), Query Frame = 1
Query: 298 ETLGVIVCDHGSRRENANDMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAHKIILHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESV---EEGA 672
E LG+I+ DHGSRR +ND+L EV E +R AG+ IVE AHMEL +PSI QAF +CV GA +I++HP+FLSPGRH DIP L AA HP + +V+ PLGL LM +VM + + EEGA
Sbjct: 9 ENLGIIIVDHGSRRAESNDLLLEVVELFRQTAGYKIVEPAHMELVEPSIAQAFQKCVGQGATRIVVHPYFLSPGRHWHEDIPRLAQEAAANHPGITHLVTAPLGLHPLMAKVMQERIETCLAHCEEGA 136
BLAST of mRNA_F-distichus_contig9661.19119.1 vs. uniprot
Match: A0A7G9NWY9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium zrk34 TaxID=2723666 RepID=A0A7G9NWY9_9BACT) HSP 1 Score: 136 bits (343), Expect = 2.580e-35 Identity = 62/119 (52.10%), Postives = 84/119 (70.59%), Query Frame = 1
Query: 304 LGVIVCDHGSRRENANDMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAHKIILHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESV 660
+G+IV DHGSRR +ND+L V + + + + I+E AHMELA+P+IEQAFDRCV GA ++ HPFFL PG+H DIP L AAAA KHP + W+V+ P+G+ E MP VM+ A+ +
Sbjct: 10 IGIIVVDHGSRRPESNDLLLAVVKLFAEQSDYPIIEPAHMELAEPTIEQAFDRCVQRGAKVVVCHPFFLLPGKHWNQDIPNLTAAAAGKHPGIRWMVTAPIGMNEKMPLVMNDAIDHCL 128
BLAST of mRNA_F-distichus_contig9661.19119.1 vs. uniprot
Match: A0A4D9D8W1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8W1_9STRA) HSP 1 Score: 137 bits (345), Expect = 4.500e-35 Identity = 68/121 (56.20%), Postives = 84/121 (69.42%), Query Frame = 1
Query: 304 LGVIVCDHGSRRENANDMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAHKIILHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEE 666
+GVIV DHGSRR+ AN+ L VA ++A +G+++VE AHMEL +PSI AF RCV GA II HPFFLS GRHV DIP L+ AA P V W +S+PLGLQ +PR+M AV E + E
Sbjct: 57 VGVIVVDHGSRRKEANEALESVASEFKALSGYELVEPAHMELCEPSIATAFGRCVERGATFIICHPFFLSRGRHVAEDIPNLLEEAASIFPGVEWALSQPLGLQADIPRLMQQAVEECIAE 177
BLAST of mRNA_F-distichus_contig9661.19119.1 vs. uniprot
Match: A0A518DEM9_9BACT (Sirohydrochlorin ferrochelatase n=1 Tax=Pirellulimonas nuda TaxID=2528009 RepID=A0A518DEM9_9BACT) HSP 1 Score: 135 bits (341), Expect = 5.710e-35 Identity = 70/145 (48.28%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 289 GSTETLGVIVCDHGSRRENANDMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAHKIILHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEEGAWQY------GDGGNC*G 705
G+ E++G+IV DHGSRR+ +N +L EVAE +R +G +IVE AHMELA+PSI AFDRCV GA ++++ P+FL PGRH DIP L A AA +HP V+ +V+ PLG+ L+ VM ++ + A GDGG C G
Sbjct: 13 GADESVGIIVVDHGSRRDASNALLLEVAELFRRQSGMEIVEPAHMELAEPSIATAFDRCVERGAKRVVVMPYFLGPGRHWDQDIPALSAKAAARHPGVSHLVTAPLGIDPLIAAVMEDRIAVCLTNAAGAEAACNACGDGGRCRG 157
BLAST of mRNA_F-distichus_contig9661.19119.1 vs. uniprot
Match: A0A445KI77_GLYSO (Sirohydrochlorin ferrochelatase, chloroplastic isoform A n=2 Tax=indigoferoid/millettioid clade TaxID=2233855 RepID=A0A445KI77_GLYSO) HSP 1 Score: 137 bits (345), Expect = 6.860e-35 Identity = 75/163 (46.01%), Postives = 102/163 (62.58%), Query Frame = 1
Query: 232 RELSASAAVPTTERGLRMDGSTETLG--VIVCDHGSRRENANDMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAHKIILHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEEGAWQYGDGGNC*GRGE 714
R+L + T G R + LG VI+ DHGSRR+ +N ML E E ++ G++IVE AHMELA+PSI AF CV GAH+II+ PFFLSPGRH T DIP L A AAK+HP+V+++V+ PLGL EL+ V++ + ++ A + C G G+
Sbjct: 45 RKLCRFLCLSTQNGGFRENSGEVGLGDAVIIVDHGSRRKESNLMLNEFVEMFKHKTGYEIVEPAHMELAEPSIRDAFQSCVEQGAHRIIVSPFFLSPGRHWTQDIPSLSAEAAKEHPDVSYIVTAPLGLHELLVDVVNDRIKHCLKHVAGDADECSVCSGTGK 207
BLAST of mRNA_F-distichus_contig9661.19119.1 vs. uniprot
Match: A0A5Q4H7Y2_9PLAN (Sirohydrochlorin cobaltochelatase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A5Q4H7Y2_9PLAN) HSP 1 Score: 135 bits (340), Expect = 7.100e-35 Identity = 62/122 (50.82%), Postives = 85/122 (69.67%), Query Frame = 1
Query: 298 ETLGVIVCDHGSRRENANDMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAHKIILHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVE 663
+ +GVIV DHGSRR AN ML +V + ++ +G+ IVE AHMELA+PSI AFD CVA GA ++LHP+FL PG+H + DIP L AA KHP++ ++V+ PLGL LM +M ++ +E
Sbjct: 7 DRIGVIVVDHGSRRAEANQMLLDVVQMFQQRSGYSIVEPAHMELAEPSIATAFDHCVARGAEMVVLHPYFLLPGKHWSEDIPALARQAASKHPKIPFMVTAPLGLHPLMAEIMQQRIARCLE 128
BLAST of mRNA_F-distichus_contig9661.19119.1 vs. uniprot
Match: W7TSP7_9STRA (Cobalamin (Vitamin B12) biosynthesis CbiX n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSP7_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.340e-34 Identity = 68/121 (56.20%), Postives = 84/121 (69.42%), Query Frame = 1
Query: 304 LGVIVCDHGSRRENANDMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAHKIILHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEE 666
+GVIV DHGSRR+ AN+ L VA ++A +G+++VE AHMEL +PSI AF RCV GA II HPFFLS GRHV DIP L+ AA P V W +S+PLGLQ +PR+M AV E + E
Sbjct: 118 VGVIVVDHGSRRKEANEALESVASEFKALSGYELVEPAHMELCEPSIATAFGRCVERGATFIICHPFFLSRGRHVAEDIPNLLEEAASIFPGVEWALSQPLGLQADIPRLMQQAVEECIAE 238 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9661.19119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig9661.19119.1 >prot_F-distichus_contig9661.19119.1 ID=prot_F-distichus_contig9661.19119.1|Name=mRNA_F-distichus_contig9661.19119.1|organism=Fucus distichus monoicous|type=polypeptide|length=211bp MRAVCLLAVAIGVAAAFVPNPSTTTRTLSARLQHRRPSTTSPSELNQRLAback to top mRNA from alignment at F-distichus_contig9661:3318..5479- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig9661.19119.1 ID=mRNA_F-distichus_contig9661.19119.1|Name=mRNA_F-distichus_contig9661.19119.1|organism=Fucus distichus monoicous|type=mRNA|length=2162bp|location=Sequence derived from alignment at F-distichus_contig9661:3318..5479- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig9661:3318..5479- >mRNA_F-distichus_contig9661.19119.1 ID=mRNA_F-distichus_contig9661.19119.1|Name=mRNA_F-distichus_contig9661.19119.1|organism=Fucus distichus monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at F-distichus_contig9661:3318..5479- (Fucus distichus monoicous)back to top |