mRNA_F-distichus_contig96511.19111.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig96511.19111.1 vs. uniprot
Match: D8LEU7_ECTSI (Cysteine desulfurase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEU7_ECTSI) HSP 1 Score: 265 bits (677), Expect = 1.090e-84 Identity = 130/182 (71.43%), Postives = 149/182 (81.87%), Query Frame = 1
Query: 1 GLTQNTGVGVPLPYEGTRRCIYLDYNATSPIFPEVTREMLPFTGSCFGNPSSAHALGRKCKAAVDKARERMAILLGCTPEEVVIVGSGSEADNHAILAAVEMHAKTVPSTKGDPSRPKPHVVSSAIEHPAITKCLDYLVSEGRVEATYVGVDEEGRVSVEDVLAAFRPETALVTIMYSNNEV 546
G++ TG+ V LPY GTRRCIYLDYNATSPIFPEV+REM PF G CFGNPSS HALGR CK AV AR R+A LLGC+PEEVV V SGSEADNHAILA++ + +K + S PHVVSSAIEHPA+TKCL++LV+EG+VE T+VGVDEEGRVSVE V+ AFRPETALVTIM+SNNEV
Sbjct: 79 GMSSKTGIAVALPYRGTRRCIYLDYNATSPIFPEVSREMFPFLGECFGNPSSGHALGRACKKAVVLARARVASLLGCSPEEVVFVASGSEADNHAILASLALSSKAATAPPSAASSSLPHVVSSAIEHPAVTKCLNHLVAEGKVEVTFVGVDEEGRVSVEGVVGAFRPETALVTIMHSNNEV 260
BLAST of mRNA_F-distichus_contig96511.19111.1 vs. uniprot
Match: A0A061S7P8_9CHLO (Cysteine desulfurase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S7P8_9CHLO) HSP 1 Score: 175 bits (444), Expect = 2.830e-49 Identity = 91/175 (52.00%), Postives = 117/175 (66.86%), Query Frame = 1
Query: 22 VGVPLPYEGTRRCIYLDYNATSPIFPEVTREMLPFTGSCFGNPSSAHALGRKCKAAVDKARERMAILLGCTPEEVVIVGSGSEADNHAILAAVEMHAKTVPSTKGDPSRPKPHVVSSAIEHPAITKCLDYLVSEGRVEATYVGVDEEGRVSVEDVLAAFRPETALVTIMYSNNEV 546
VG+PLP+ + CIYLDYNAT+PIFPEV EM PF FGNPSS HA G+K KAA+D AR+R+A +G +PEE+V G+E++N AI+ A+E P HVVS+ IEHPAI +CL L +GRV T VGVD EG V +V+AA P+T L+T+M+SNNE+
Sbjct: 79 VGIPLPF--SEDCIYLDYNATTPIFPEVADEMQPFLTHSFGNPSSTHAYGQKTKAALDLARQRLADAVGASPEEIVFTSCGTESNNWAIVGAIEASGADCP-----------HVVSTKIEHPAILECLASLARKGRVRYTLVGVDSEGVVDPGEVMAAVEPDTCLITVMHSNNEI 240
BLAST of mRNA_F-distichus_contig96511.19111.1 vs. uniprot
Match: A0A7S0RLS7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RLS7_9CHLO) HSP 1 Score: 172 bits (435), Expect = 5.650e-49 Identity = 89/177 (50.28%), Postives = 111/177 (62.71%), Query Frame = 1
Query: 16 TGVGVPLPYEGTRRCIYLDYNATSPIFPEVTREMLPFTGSCFGNPSSAHALGRKCKAAVDKARERMAILLGCTPEEVVIVGSGSEADNHAILAAVEMHAKTVPSTKGDPSRPKPHVVSSAIEHPAITKCLDYLVSEGRVEATYVGVDEEGRVSVEDVLAAFRPETALVTIMYSNNEV 546
+ +G LP E + C+YLDYNATSPIFPEV EM PF FGNPSS H R C AAV ARER+A L+GC EE++ GSE+DNHAI+ + ++ + PH+VSS IEHPAI +CL L +EGR+ T V VD EG VS V A P T LV++M+SNNE+
Sbjct: 24 SSIGERLPAEEHKSCVYLDYNATSPIFPEVAEEMQPFLFHHFGNPSSGHVFARPCAAAVKLARERVAKLIGCETEEILFTSCGSESDNHAIVGVISAASERLAGAT-------PHIVSSNIEHPAILECLSALAAEGRLTYTLVPVDGEGLVSPAQVAEAMTPNTVLVSVMHSNNEI 193
BLAST of mRNA_F-distichus_contig96511.19111.1 vs. uniprot
Match: A0A836CMI1_9STRA (Pyridoxal phosphate-dependent transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMI1_9STRA) HSP 1 Score: 170 bits (431), Expect = 4.600e-48 Identity = 90/164 (54.88%), Postives = 113/164 (68.90%), Query Frame = 1
Query: 55 RCIYLDYNATSPIFPEVTREMLPFTGSCFGNPSSAHALGRKCKAAVDKARERMAILLGCTPEEVVIVGSGSEADNHAILAAVEMHAKTVPSTKGDPSRPKPHVVSSAIEHPAITKCLDYLVSEGRVEATYVGVDEEGRVSVEDVLAAFRPETALVTIMYSNNEV 546
+C+YLDYN TSPIFPEV+RE+LP+ SCFGNPSS+HA G KAAVD AR+R+A L+GC +E+V SG+E+DN A+L A+ HA T + GD S PH+VSSAIEHPA+ + L L G + T VGV EG V +V A T LVT+M+SNNEV
Sbjct: 2 QCVYLDYNGTSPIFPEVSREVLPYVTSCFGNPSSSHAHGVASKAAVDLARKRVAALIGCDEDEIVFTCSGTESDNWALLGALRQHAST--AAAGDRSG-APHIVSSAIEHPAVLEQLRDLQRRGAADFTLVGVGPEGAVCAREVAEAVTERTVLVTLMHSNNEV 162
BLAST of mRNA_F-distichus_contig96511.19111.1 vs. uniprot
Match: E1ZDB8_CHLVA (Aminotran_5 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZDB8_CHLVA) HSP 1 Score: 170 bits (431), Expect = 5.130e-48 Identity = 94/178 (52.81%), Postives = 114/178 (64.04%), Query Frame = 1
Query: 22 VGVPLPYEGTRRCIYLDYNATSPIFPEVTREMLPFTGSCFGNPSSAHALGRKCKAAVDKARERMAILLGCTPEEVVIVGSGSEADNHAILAAV---EMHAKTVPSTKGDPSRPKPHVVSSAIEHPAITKCLDYLVSEGRVEATYVGVDEEGRVSVEDVLAAFRPETALVTIMYSNNEV 546
+G PLP+ C+YLDYNAT+PIFPE EM PF + FGNPSSAHA GR CKAAVD AR R+A ++G P+E+ GSE+DN AI AV + P T G + PHVVSS IEHPA+ +CL L ++G +E T V V EG V V DV AA P T L+T M+SNNEV
Sbjct: 4 LGEPLPHIQASGCVYLDYNATTPIFPEAADEMRPFL-TAFGNPSSAHAFGRPCKAAVDAARARVAAMVGADPDEIFFTSCGSESDNWAIWGAVMEARRQQRAAPDTSGAAAF-LPHVVSSRIEHPAVIECLAMLAAQGLLEYTLVPVSCEGLVRVADVEAAMTPHTCLLTFMHSNNEV 179
BLAST of mRNA_F-distichus_contig96511.19111.1 vs. uniprot
Match: A0A7S3RKF8_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RKF8_EMIHU) HSP 1 Score: 165 bits (417), Expect = 7.910e-48 Identity = 84/163 (51.53%), Postives = 110/163 (67.48%), Query Frame = 1
Query: 58 CIYLDYNATSPIFPEVTREMLPFTGSCFGNPSSAHALGRKCKAAVDKARERMAILLGCTPEEVVIVGSGSEADNHAILAAVEMHAKTVPSTKGDPSRPKPHVVSSAIEHPAITKCLDYLVSEGRVEATYVGVDEEGRVSVEDVLAAFRPETALVTIMYSNNEV 546
C+YLDY AT+P++PEV M P+ +GNPSS HA GR C AA+ +AR +A L+G P E+ G GSE+DN AI+ A+EM G + P+PHVV+S IEHPA+ C++ L + GR+EATYV VDEEG VS E V AA +T LV++M+SNNEV
Sbjct: 3 CVYLDYQATTPVWPEVAAAMTPYLTHHWGNPSSGHAFGRPCGAAIGQARAAVAELIGAEPSEICFTGCGSESDNFAIVGALEMEEARRRGA-GGAALPRPHVVASNIEHPAVELCIEALCAAGRLEATYVPVDEEGLVSAEAVAAATTEQTFLVSVMHSNNEV 164
BLAST of mRNA_F-distichus_contig96511.19111.1 vs. uniprot
Match: A0A383VU94_TETOB (Aminotran_5 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VU94_TETOB) HSP 1 Score: 166 bits (421), Expect = 2.600e-46 Identity = 85/178 (47.75%), Postives = 116/178 (65.17%), Query Frame = 1
Query: 13 NTGVGVPLPYEGTRRCIYLDYNATSPIFPEVTREMLPFTGSCFGNPSSAHALGRKCKAAVDKARERMAILLGCTPEEVVIVGSGSEADNHAILAAVEMHAKTVPSTKGDPSRPKPHVVSSAIEHPAITKCLDYLVSEGRVEATYVGVDEEGRVSVEDVLAAFRPETALVTIMYSNNEV 546
+TGVG LP+ C+YLDYNAT+PI+PEV+ M P+ FGNPSS HA G++ +AAVDKAR+++A L+ C+P+EV G+E+DN A+ AV + + PHVV+S IEHPA+T CL + +G T V VD +G +SV DV++A P T LV+IM+SNNEV
Sbjct: 11 STGVGSKLPH--LAECVYLDYNATTPIYPEVSEAMKPYIYELFGNPSSVHAYGQQTRAAVDKARQQVAGLINCSPDEVAFTSCGTESDNWALWGAVMARRGSXXXXXXXXQQGLPHVVTSQIEHPAVTACLRSMAEQGLCTFTAVPVDSQGLISVTDVVSALTPNTVLVSIMHSNNEV 186
BLAST of mRNA_F-distichus_contig96511.19111.1 vs. uniprot
Match: A0A7J7QRE6_9CHLO (Pyridoxal phosphate-dependent transferase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QRE6_9CHLO) HSP 1 Score: 167 bits (423), Expect = 3.060e-46 Identity = 90/178 (50.56%), Postives = 115/178 (64.61%), Query Frame = 1
Query: 13 NTGVGVPLPYEGTRRCIYLDYNATSPIFPEVTREMLPFTGSCFGNPSSAHALGRKCKAAVDKARERMAILLGCTPEEVVIVGSGSEADNHAILAAVEMHAKTVPSTKGDPSRPKPHVVSSAIEHPAITKCLDYLVSEGRVEATYVGVDEEGRVSVEDVLAAFRPETALVTIMYSNNEV 546
N GVG LP+ C+YLDYNAT+PIFPEV M P+T FGNPSS HA GR+ +AAVDKAR+++A L+ CTP EV G+E+DN A+ AV + + T+G PHVV+S +EHPA+T CL + G T V VD +G VS DV+AA P T LV++M+SNNEV
Sbjct: 59 NQGVGSKLPHLAD--CVYLDYNATTPIFPEVAEAMKPYTYELFGNPSSVHAYGRQTRAAVDKARQQVAALISCTPSEVCFTSCGTESDNWALWGAVMGRGRGM--TQGQ----LPHVVTSQMEHPAVTACLRSMADMGLCTYTAVPVDSQGLVSAADVVAALTPSTVLVSVMHSNNEV 228
BLAST of mRNA_F-distichus_contig96511.19111.1 vs. uniprot
Match: A0A2P6TKZ5_CHLSO (Cysteine desulfurase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TKZ5_CHLSO) HSP 1 Score: 166 bits (419), Expect = 3.560e-46 Identity = 92/182 (50.55%), Postives = 113/182 (62.09%), Query Frame = 1
Query: 1 GLTQNTGVGVPLPYEGTRRCIYLDYNATSPIFPEVTREMLPFTGSCFGNPSSAHALGRKCKAAVDKARERMAILLGCTPEEVVIVGSGSEADNHAILAAVEMHAKTVPSTKGDPSRPKPHVVSSAIEHPAITKCLDYLVSEGRVEATYVGVDEEGRVSVEDVLAAFRPETALVTIMYSNNEV 546
G + G+G PLPY C YLDYNATSPIFPEV EM PF + FGNPSS HA GR C+ AVD AR R+A ++G P+E+ G+EAD AI AV K ++ P PHVV+S IEHPA+ + L ++G + V VD EGRVS DV AA R +T LVT+M+SNNEV
Sbjct: 10 GAPRLPGLGEPLPYCDQSGCTYLDYNATSPIFPEVAEEMRPFL-TAFGNPSSGHAFGRPCRDAVDLARRRVAAMVGAEPDEIYFTSCGTEADAWAIWGAVMAARKRHSASSSTPV--VPHVVTSCIEHPAVLETLAAYEAQGLLTYMAVPVDSEGRVSAADVAAAIRDDTCLVTLMHSNNEV 188
BLAST of mRNA_F-distichus_contig96511.19111.1 vs. uniprot
Match: A0A8J5X355_DIALT (Aminotran_5 domain-containing protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X355_DIALT) HSP 1 Score: 166 bits (420), Expect = 6.890e-46 Identity = 94/183 (51.37%), Postives = 112/183 (61.20%), Query Frame = 1
Query: 1 GLTQNTGVGVPLPYEGTRRCIYLDYNATSPIFPEVTREMLPFTGSCFGNPSSAHALGRKCKAAVDKARERMAILLGCTPEEVVIVGSGSEADNHAILAAVEM-HAKTVPSTKGDPSRPKPHVVSSAIEHPAITKCLDYLVSEGRVEATYVGVDEEGRVSVEDVLAAFRPETALVTIMYSNNEV 546
G G +P P G C+YLDY AT PI+P+V M PF +GNPSS H GR K AVD AR R+A LLGC P EVV GSE+DN AILAAVE+ A+ P PHVV+SAIEHPA++ C+D LV EGR + VGVD GRVS DV TALV++M++NNEV
Sbjct: 47 GARSAVGSALP-PTPGAEGCLYLDYAATCPIYPDVAAAMAPFFSVQWGNPSSPHVFGRPTKLAVDGARARVAELLGCAPSEVVFTSCGSESDNWAILAAVELARARLAPGEV-------PHVVTSAIEHPAVSLCVDALVREGRATVSRVGVDAWGRVSPADVAREVNHRTALVSVMHANNEV 221 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96511.19111.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig96511.19111.1 >prot_F-distichus_contig96511.19111.1 ID=prot_F-distichus_contig96511.19111.1|Name=mRNA_F-distichus_contig96511.19111.1|organism=Fucus distichus monoicous|type=polypeptide|length=190bp GLTQNTGVGVPLPYEGTRRCIYLDYNATSPIFPEVTREMLPFTGSCFGNPback to top mRNA from alignment at F-distichus_contig96511:678..2119+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig96511.19111.1 ID=mRNA_F-distichus_contig96511.19111.1|Name=mRNA_F-distichus_contig96511.19111.1|organism=Fucus distichus monoicous|type=mRNA|length=1442bp|location=Sequence derived from alignment at F-distichus_contig96511:678..2119+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig96511:678..2119+ >mRNA_F-distichus_contig96511.19111.1 ID=mRNA_F-distichus_contig96511.19111.1|Name=mRNA_F-distichus_contig96511.19111.1|organism=Fucus distichus monoicous|type=CDS|length=1140bp|location=Sequence derived from alignment at F-distichus_contig96511:678..2119+ (Fucus distichus monoicous)back to top |