mRNA_F-distichus_contig96399.19095.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig96399.19095.1 vs. uniprot
Match: D7FUL4_ECTSI (YHYH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUL4_ECTSI) HSP 1 Score: 200 bits (508), Expect = 1.970e-59 Identity = 87/137 (63.50%), Postives = 99/137 (72.26%), Query Frame = 1
Query: 7 VTDYNSTAFALEGDTLDACGGHATTEGWYHYHGTPGCLEEQVMAGEGLTMDDHSPFLGWSYDGFPMYGHLGPSGTEMRACDTHGADETYCLDTCSGYEGEMPDIDSFTYRYYLTCGYDESFFPMTINCFRGCCPDGM 417
V +Y TAF LE DTLD CGGHAT G YHYH T GCL+EQ G +HSP LGWSYDGFP+YG LGP G EM+ C GAD T CLD CSGYE + D D+FTYRYY +CG+DESFFP T+NC+RGCCP G+
Sbjct: 162 VEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQA----GAVAGEHSPLLGWSYDGFPIYGQLGPGGVEMKMCGADGADSTVCLDLCSGYEASI-DEDTFTYRYYTSCGFDESFFPFTLNCYRGCCPTGV 293
BLAST of mRNA_F-distichus_contig96399.19095.1 vs. uniprot
Match: A0A6H5KP42_9PHAE (YHYH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP42_9PHAE) HSP 1 Score: 198 bits (503), Expect = 3.860e-59 Identity = 88/136 (64.71%), Postives = 99/136 (72.79%), Query Frame = 1
Query: 7 VTDYNSTAFALEGDTLDACGGHATTEGWYHYHGTPGCLEEQVMAGEGLTMDDHSPFLGWSYDGFPMYGHLGPSGTEMRACDTHGADETYCLDTCSGYEGEMPDIDSFTYRYYLTCGYDESFFPMTINCFRGCCPDG 414
V +Y TAF LE DT D CGGHAT G YHYHGT GCL+EQ A +G +HSP LGWSYDGFP+YG LGP G EM+ C GA +T CLD CSGYE + D D FTYRYY +CG+DESFFP T+NCFRGCCP G
Sbjct: 147 VVEYEDTAFYLEADTFDPCGGHATPTGAYHYHGTAGCLQEQAGAVKG----EHSPVLGWSYDGFPIYGQLGPGGVEMKMCGADGAHDTACLDLCSGYEATI-DEDEFTYRYYTSCGFDESFFPFTLNCFRGCCPTG 277
BLAST of mRNA_F-distichus_contig96399.19095.1 vs. uniprot
Match: A0A8J2X2K6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2K6_9STRA) HSP 1 Score: 130 bits (328), Expect = 9.040e-33 Identity = 63/142 (44.37%), Postives = 81/142 (57.04%), Query Frame = 1
Query: 16 YNSTAFALEGDTLDACGGHATTEGWYHYHGTPGCLEEQVMAGEGLTMDDHSPFLGWSYDGFPMYGHLGPSGTEMRACDTHGADETYCLDTCSGYEGEMPDIDSFTYRYYLTCGYDES--------------FFPMTINCFRG 399
Y+ TA E + D C GH++ G YHYH P CL Q A ++ D HS +GW+ DGFP+YG LGP G E+R C GA TYC D C GYEGE+PD+D++ YRYY+T ++ +FP TI C RG
Sbjct: 170 YDDTA---EWISFDCCSGHSSGTGGYHYHFPPSCLIAQANADAPIS-DGHSSQIGWAQDGFPIYGPLGPGGVEIRNCGASGAHATYCQDKCGGYEGELPDVDNYKYRYYITGKVNDLNSLPSYPKPDDLDLYFPFTIRCHRG 307
BLAST of mRNA_F-distichus_contig96399.19095.1 vs. uniprot
Match: A0A7S3ZWN8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWN8_9STRA) HSP 1 Score: 125 bits (315), Expect = 7.800e-32 Identity = 58/131 (44.27%), Postives = 73/131 (55.73%), Query Frame = 1
Query: 49 TLDACGGHATTEGWYHYHGTPGCLEEQVMAGEGLTMDDHSPFLGWSYDGFPMYGHLGPSGTEMRACDTHGADETYCLDTCSGYEGEMPDIDSFTYRYYLTCGYDES--------------FFPMTINCFRG 399
+ D C GH++ G YHYH P CL Q E HS +GW+ DGFP+YG LGP G E+R C GA TYC D C GYEGE+PD+D++ YRYY+T ++ +FP TI C RG
Sbjct: 209 SFDCCSGHSSGTGGYHYHFPPSCLIAQANK-EAPIAGGHSAQIGWAQDGFPIYGPLGPGGVEIRNCGASGAHATYCQDKCGGYEGELPDVDNYKYRYYITGKVNDLNSLPSYPKPDNVDLYFPFTIRCHRG 338
BLAST of mRNA_F-distichus_contig96399.19095.1 vs. uniprot
Match: A0A8J2X5K3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X5K3_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.010e-31 Identity = 58/132 (43.94%), Postives = 76/132 (57.58%), Query Frame = 1
Query: 49 TLDACGGHATTEGWYHYHGTPGCLEEQVMAGEGLTMDDHSPFLGWSYDGFPMYGHLGPSGTEMRACDTHGADETYCLDTCSGYEGEMPDIDSFTYRYYLTCGY--------------DESFFPMTINCFRGC 402
+ D C GH+ + YHYH P CL Q ++ D HS +GW+ DGFP+YG LGP G E+R C T GA TYC D C GYEGE+P +D++ YRYY+T +E ++P TI C+RGC
Sbjct: 149 SFDCCTGHSDYDAAYHYHFPPSCLLAQANKAAPIS-DGHSAQVGWAEDGFPIYGPLGPGGVEIRNCGTSGAHSTYCQDECGGYEGELPGVDNYKYRYYITGKVGDLNTLPSTPMPDSEELYYPYTIRCYRGC 279
BLAST of mRNA_F-distichus_contig96399.19095.1 vs. uniprot
Match: D8LCJ6_ECTSI (YHYH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ6_ECTSI) HSP 1 Score: 119 bits (299), Expect = 8.240e-31 Identity = 54/101 (53.47%), Postives = 63/101 (62.38%), Query Frame = 1
Query: 1 KPVTDYNSTAFALEGDTLDACGGHATTEGWYHYHGTPGCLEEQVMAGEGLTMDDHSPFLGWSYDGFPMYGHLGPSGTEMRACDTHGADETYCLDTCSGYEG 303
+ T Y + A L GDT D CGG T +G YHYH PGCL+EQ M + LT DDHSP LGW+YDGFP+YG LGPSG EM C G+ Y T + Y G
Sbjct: 16 RAATTYGAAAAKLHGDTTDLCGGSTTADGVYHYHNAPGCLQEQAMKAQNLTADDHSPLLGWAYDGFPIYGQLGPSGVEMLTC---GSGPEYFPFTINCYRG 113
BLAST of mRNA_F-distichus_contig96399.19095.1 vs. uniprot
Match: R1DZX8_EMIHU (EF-hand domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DZX8_EMIHU) HSP 1 Score: 122 bits (307), Expect = 1.090e-29 Identity = 65/158 (41.14%), Postives = 80/158 (50.63%), Query Frame = 1
Query: 7 VTDYNSTAFALEGDTLDACGGHAT--TEGW-YHYHGTPGCLEEQVMAGEGLTMDDHSPFLGWSYDGFPMYGHLGPSGTEMRACDTHGADETYCLDTCSGYEGEMPDIDSFTYRYYLTCG-----------------YDESFFPMTINCFRGCCPDGME 420
V S A EG+T D CGGH++ + G+ YHYH P CL Q+ G + HSP +GW YDGFP+YG GP G +M C GA E YCLD C+GY + ID F YRYY++ + SFFP T C GC P G
Sbjct: 462 VMSETSNAVTAEGETFDRCGGHSSGSSAGFQYHYHIPPTCLLAQL----GQYIGQHSPQVGWMYDGFPVYGPFGPDGVQMIKCGQTGAHEVYCLDACNGYYSDDESIDVFKYRYYMSGNTTDQASLRASPLPTSDPVESSFFPFTPLCSLGCKPSGAN 615
BLAST of mRNA_F-distichus_contig96399.19095.1 vs. uniprot
Match: R1DKM5_EMIHU (YHYH domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DKM5_EMIHU) HSP 1 Score: 118 bits (295), Expect = 2.930e-29 Identity = 61/138 (44.20%), Postives = 72/138 (52.17%), Query Frame = 1
Query: 40 EGDTLDACGGHATT-----EGWYHYHGTPGCLEEQVMAGEGLTMDDHSPFLGWSYDGFPMYGHLGPSGTEMRACDTHGADETYCLDTCSGYEGEMPDIDSFTYRYYLTCGYDE------------SFFPMTINCFRGC 402
E + D CGGHA G YHYH P CLE Q+ G D HSP +GWS DGFP+YG LGP G M G TYCLD CSG+E E+P +D FTYRYY + S +P + C+RGC
Sbjct: 129 EWTSFDFCGGHARCLAFECNGDYHYHFPPSCLETQI----GNLTDGHSPQIGWSLDGFPIYGRLGPGGVTMEHT-AQGCTGTYCLDDCSGFEMEIPGLDEFTYRYYFNGPLSDLVSLPTDPKPSASDYPFAMKCYRGC 261
BLAST of mRNA_F-distichus_contig96399.19095.1 vs. uniprot
Match: A0A7S3JW52_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW52_9STRA) HSP 1 Score: 109 bits (272), Expect = 4.820e-25 Identity = 59/163 (36.20%), Postives = 84/163 (51.53%), Query Frame = 1
Query: 16 YNSTAFALEGDTLDACGGHA--TTEGWYHYHGTPGCLEEQVMAGEGLTMDDHSPFLGWSYDGFPMYGHLGPSGTEMRACDTHGADETYCLDTCSGYEGEMPDI-DSFTYRYYL-----------------------TCGYDES--FFPMTINCFRGCCPDGME 420
YNS +A EG + D C HA +T YH H P CL +Q+ G T ++HSP +G+ +DGFP+YG GP+G M++C AD YC+D C G+ + I D + YRYY+ C Y ++ ++P T C RGCCP G++
Sbjct: 153 YNSAPYA-EGYSFDMCNQHAALSTAASYHSHVPPSCLLDQL----GQTDNEHSPQIGFLFDGFPVYGPRGPNGIMMKSCTESTADSVYCVDKCGGFADDGSIINDGYVYRYYIMGTYKVQASCTWDLWANLDGEATNCDYQQASTYYPFTPLCMRGCCPSGVD 310
BLAST of mRNA_F-distichus_contig96399.19095.1 vs. uniprot
Match: A0A6H5JUE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE3_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 4.710e-23 Identity = 37/59 (62.71%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 235 MRACDTHGADETYCLDTCSGYEGEMPDIDSFTYRYYLTCGYDESFFPMTINCFRGCCPD 411
M C+T GA+ETYCLD C GYEGE+ ID F YRYY+TCG +FP TINC+RGCC +
Sbjct: 1 MLRCNTTGANETYCLDECGGYEGELSGIDHFLYRYYMTCGSGPEYFPFTINCYRGCCEE 59 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96399.19095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig96399.19095.1 >prot_F-distichus_contig96399.19095.1 ID=prot_F-distichus_contig96399.19095.1|Name=mRNA_F-distichus_contig96399.19095.1|organism=Fucus distichus monoicous|type=polypeptide|length=141bp KPVTDYNSTAFALEGDTLDACGGHATTEGWYHYHGTPGCLEEQVMAGEGLback to top mRNA from alignment at F-distichus_contig96399:47..2149- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig96399.19095.1 ID=mRNA_F-distichus_contig96399.19095.1|Name=mRNA_F-distichus_contig96399.19095.1|organism=Fucus distichus monoicous|type=mRNA|length=2103bp|location=Sequence derived from alignment at F-distichus_contig96399:47..2149- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig96399:47..2149- >mRNA_F-distichus_contig96399.19095.1 ID=mRNA_F-distichus_contig96399.19095.1|Name=mRNA_F-distichus_contig96399.19095.1|organism=Fucus distichus monoicous|type=CDS|length=846bp|location=Sequence derived from alignment at F-distichus_contig96399:47..2149- (Fucus distichus monoicous)back to top |