mRNA_F-distichus_contig96349.19090.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig96349.19090.1 vs. uniprot
Match: A0A6H5K712_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K712_9PHAE) HSP 1 Score: 127 bits (318), Expect = 1.200e-28 Identity = 63/123 (51.22%), Postives = 82/123 (66.67%), Query Frame = 3
Query: 912 SNIFKWVKSEAVIVENAATHVSKDLLKNVRLKPWFPLAEKELHTLFRAKRKRGLKVSTLWLCVTMAALIKKLYPDDSRAETFTSTWRFVGKWAKKRRVATRRRKNSKNQSIEERLPNIQLFHK 1280
SNI KW K E IV AA V K LL + K WFP AEK L+ +F +RKR LKVSTLWL + L++++YP D RA F +++R+ KWAK+ ++ RRR N KN+S+EERLP IQ FH+
Sbjct: 253 SNIVKWAKDEKAIVAAAADDVKKSLLAKQQRKRWFPEAEKRLYKMFAERRKRKLKVSTLWLTIMFRKLVREMYPGDQRAAAFRASFRWARKWAKRHNLSKRRRTNLKNKSVEERLPKIQRFHR 375
BLAST of mRNA_F-distichus_contig96349.19090.1 vs. uniprot
Match: A0A6H5L8K0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8K0_9PHAE) HSP 1 Score: 125 bits (314), Expect = 2.990e-28 Identity = 63/123 (51.22%), Postives = 83/123 (67.48%), Query Frame = 3
Query: 912 SNIFKWVKSEAVIVENAATHVSKDLLKNVRLKPWFPLAEKELHTLFRAKRKRGLKVSTLWLCVTMAALIKKLYPDDSRAETFTSTWRFVGKWAKKRRVATRRRKNSKNQSIEERLPNIQLFHK 1280
SNI KW K E IV AA V K LL + K WFP AEK L+ +F +RKR LKVSTLWL +T L+++++P D RA F +++R+ KWAK+ ++ RRR N KN+SI+ERLP IQ FH+
Sbjct: 277 SNIVKWAKDEKAIVAAAADDVKKSLLARQQPKRWFPEAEKRLYKIFVERRKRKLKVSTLWLTITFRELVREMFPGDQRAAAFRASFRWARKWAKRHNLSKRRRTNVKNKSIKERLPKIQRFHR 399
BLAST of mRNA_F-distichus_contig96349.19090.1 vs. uniprot
Match: A0A6H5J6R3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6R3_9PHAE) HSP 1 Score: 128 bits (321), Expect = 3.540e-28 Identity = 64/123 (52.03%), Postives = 83/123 (67.48%), Query Frame = 3
Query: 912 SNIFKWVKSEAVIVENAATHVSKDLLKNVRLKPWFPLAEKELHTLFRAKRKRGLKVSTLWLCVTMAALIKKLYPDDSRAETFTSTWRFVGKWAKKRRVATRRRKNSKNQSIEERLPNIQLFHK 1280
SNI KW K E IV AA V K LL + K WFP AEK L+ +F +RKR LKVSTLWL +T L++++YP D RA F +++R+ KWAK+ ++ RRR N KN+S+EERLP IQ FH+
Sbjct: 323 SNIVKWAKDEKAIVAAAADDVKKSLLAKQQPKRWFPEAEKRLYKMFVERRKRKLKVSTLWLTITFRKLVREMYPGDQRAAAFRASFRWARKWAKRHNLSKRRRTNLKNKSVEERLPKIQRFHR 445
BLAST of mRNA_F-distichus_contig96349.19090.1 vs. uniprot
Match: A0A6H5L1Y1_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Y1_9PHAE) HSP 1 Score: 127 bits (320), Expect = 4.940e-28 Identity = 65/123 (52.85%), Postives = 83/123 (67.48%), Query Frame = 3
Query: 912 SNIFKWVKSEAVIVENAATHVSKDLLKNVRLKPWFPLAEKELHTLFRAKRKRGLKVSTLWLCVTMAALIKKLYPDDSRAETFTSTWRFVGKWAKKRRVATRRRKNSKNQSIEERLPNIQLFHK 1280
SNI KW K E IV AA V K LL + K WFP AEK L+ +F +RKR LKVSTLWL +T L++++YP D RA F +++R+ KWAK+ ++ RRR N KN+S EERLPNIQ FH+
Sbjct: 443 SNIVKWAKDEKAIVAAAADDVKKSLLAKQQPKRWFPEAEKRLYKMFVERRKRKLKVSTLWLTITFRKLVREMYPGDQRAAAFRASFRWARKWAKRHNLSKRRRTNLKNKSGEERLPNIQRFHR 565
BLAST of mRNA_F-distichus_contig96349.19090.1 vs. uniprot
Match: A0A6H5KDV1_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV1_9PHAE) HSP 1 Score: 125 bits (313), Expect = 2.850e-27 Identity = 61/121 (50.41%), Postives = 87/121 (71.90%), Query Frame = 3
Query: 918 IFKWVKSEAVIVENAATHVSKDLLKNVRLKPWFPLAEKELHTLFRAKRKRGLKVSTLWLCVTMAALIKKLYPDDSRAETFTSTWRFVGKWAKKRRVATRRRKNSKNQSIEERLPNIQLFHK 1280
I KW + EA IV++AA V K LL + K WFP EK+L+ +F A+R+R LKVSTLWL VT L+++ +P+D RA F++++R+ KWAK+ +++ RRR N KN+S+EERLP IQ FH+
Sbjct: 212 IVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHR 332
BLAST of mRNA_F-distichus_contig96349.19090.1 vs. uniprot
Match: A0A6H5KV22_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV22_9PHAE) HSP 1 Score: 124 bits (312), Expect = 3.400e-27 Identity = 61/120 (50.83%), Postives = 86/120 (71.67%), Query Frame = 3
Query: 918 IFKWVKSEAVIVENAATHVSKDLLKNVRLKPWFPLAEKELHTLFRAKRKRGLKVSTLWLCVTMAALIKKLYPDDSRAETFTSTWRFVGKWAKKRRVATRRRKNSKNQSIEERLPNIQLFH 1277
I KW + EA IV++AA V K LL + K WFP EK+L+ +F A+R+R LKVSTLWL VT L+++ +P+D RA F++++R+ KWAK+ +++ RRR N KN+S+EERLP IQ FH
Sbjct: 171 IVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFH 290
BLAST of mRNA_F-distichus_contig96349.19090.1 vs. uniprot
Match: A0A6H5JFX9_9PHAE (C2H2-type domain-containing protein n=15 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX9_9PHAE) HSP 1 Score: 125 bits (313), Expect = 3.820e-27 Identity = 61/121 (50.41%), Postives = 87/121 (71.90%), Query Frame = 3
Query: 918 IFKWVKSEAVIVENAATHVSKDLLKNVRLKPWFPLAEKELHTLFRAKRKRGLKVSTLWLCVTMAALIKKLYPDDSRAETFTSTWRFVGKWAKKRRVATRRRKNSKNQSIEERLPNIQLFHK 1280
I KW + EA IV++AA V K LL + K WFP EK+L+ +F A+R+R LKVSTLWL VT L+++ +P+D RA F++++R+ KWAK+ +++ RRR N KN+S+EERLP IQ FH+
Sbjct: 326 IVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHR 446
BLAST of mRNA_F-distichus_contig96349.19090.1 vs. uniprot
Match: A0A6H5JKG3_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG3_9PHAE) HSP 1 Score: 124 bits (310), Expect = 7.100e-27 Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = 3
Query: 918 IFKWVKSEAVIVENAATHVSKDLLKNVRLKPWFPLAEKELHTLFRAKRKRGLKVSTLWLCVTMAALIKKLYPDDSRAETFTSTWRFVGKWAKKRRVATRRRKNSKNQSIEERLPNIQLFHK 1280
I KW + EA IV++AA V K LL + K WFP EK+L+ F A+R+R LKVSTLWL VT L+++ +P+D RA F++++R+ KWAK+ +++ RRR N KN+S+EERLP IQ FH+
Sbjct: 144 IVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLYNTFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHR 264
BLAST of mRNA_F-distichus_contig96349.19090.1 vs. uniprot
Match: A0A6H5K4R4_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R4_9PHAE) HSP 1 Score: 124 bits (310), Expect = 9.200e-27 Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = 3
Query: 918 IFKWVKSEAVIVENAATHVSKDLLKNVRLKPWFPLAEKELHTLFRAKRKRGLKVSTLWLCVTMAALIKKLYPDDSRAETFTSTWRFVGKWAKKRRVATRRRKNSKNQSIEERLPNIQLFHK 1280
I KW + EA IV++AA V K LL + K WFP EK+L +F A+R+R LKVSTLWL VT L+++ +P+D RA F++++R+ KWAK+ +++ RRR N KN+S+EERLP IQ FH+
Sbjct: 326 IVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLSNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHR 446
BLAST of mRNA_F-distichus_contig96349.19090.1 vs. uniprot
Match: A0A6H5KCI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI3_9PHAE) HSP 1 Score: 120 bits (301), Expect = 3.040e-26 Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 3
Query: 912 SNIFKWVKSEAVIVENAATHVSKDLLKNVRLKPWFPLAEKELHTLFRAKRKRGLKVSTLWLCVTMAALIKKLYPDDSRAETFTSTWRFVGKWAKKRRVATRRRKNSKNQSIEERLPNIQLFHK 1280
SNI KW K+E +V AA V K LL + K WFP AEK L+ F +RKR LKVSTLWL +T L++++ P D RA +F +++R+ KWAK+ ++ RRR N KN+S+EER P IQ FH+
Sbjct: 283 SNIVKWAKNEKELVAAAADDVKKSLLAKQQPKRWFPEAEKRLYKGFVERRKRKLKVSTLWLTITFRKLVREMNPGDQRAASFRASFRWARKWAKRHNLSNRRRTNLKNKSVEERFPKIQRFHR 405 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96349.19090.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig96349.19090.1 >prot_F-distichus_contig96349.19090.1 ID=prot_F-distichus_contig96349.19090.1|Name=mRNA_F-distichus_contig96349.19090.1|organism=Fucus distichus monoicous|type=polypeptide|length=253bp MQPPSRMSSTAAASTLASQVQSVPPPTPSPAAVGSRANRRKNGALAKAAKback to top mRNA from alignment at F-distichus_contig96349:8..1833- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig96349.19090.1 ID=mRNA_F-distichus_contig96349.19090.1|Name=mRNA_F-distichus_contig96349.19090.1|organism=Fucus distichus monoicous|type=mRNA|length=1826bp|location=Sequence derived from alignment at F-distichus_contig96349:8..1833- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig96349:8..1833- >mRNA_F-distichus_contig96349.19090.1 ID=mRNA_F-distichus_contig96349.19090.1|Name=mRNA_F-distichus_contig96349.19090.1|organism=Fucus distichus monoicous|type=CDS|length=1518bp|location=Sequence derived from alignment at F-distichus_contig96349:8..1833- (Fucus distichus monoicous)back to top |