mRNA_F-distichus_contig9634.19089.1 (mRNA) Fucus distichus monoicous
|
Overview
Homology
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: D8LLY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY8_ECTSI) HSP 1 Score: 357 bits (917), Expect = 2.350e-122 Identity = 184/214 (85.98%), Postives = 193/214 (90.19%), Query Frame = 1
Query: 1 QGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSI-EKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEV 639
QG+YLQALECMERGLVLRQHFFGSDSEEVWSACK+VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD+ GRAVTYNNLACYYRRRG LH+ALQYL KALKIEAKM S + HPADTHLNTCAVLSQIGRH+GALEHAQSALILLQEE+FGG A +G + E DQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEV
Sbjct: 24 QGDYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRV-------EHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGATVGDAGGEGGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEV 230
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A7S2CPG4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPG4_9STRA) HSP 1 Score: 348 bits (893), Expect = 1.040e-117 Identity = 179/247 (72.47%), Postives = 209/247 (84.62%), Query Frame = 1
Query: 1 QGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARDSKIR 741
QG YL+ALECMERGLVLRQHFFG+DS+EVW ACKVVGEMCNLLAMTYLQQEDF+MVLELLKKAEILTERD GRAVT+NNLACYYRR+G LHAALQYL+KALKIE K+ + +PADT+LNTCAVLSQ+GRH+ ALEHAQ ALILLQEE+ +++ G + ++ P+ADRIAVLAIAYHN+GVE EFLKKF+ SLQSYRKGVEV++ +LG +HA+T+TLRNS IAARRAI RD + R
Sbjct: 27 QGNYLEALECMERGLVLRQHFFGADSDEVWRACKVVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDNAGRAVTFNNLACYYRRQGKLHAALQYLQKALKIENKL--------DQVDNPADTYLNTCAVLSQLGRHQSALEHAQQALILLQEEL----SRVLGPMADGNEAPKADRIAVLAIAYHNVGVEYEFLKKFDQSLQSYRKGVEVSERFLGPDHAITVTLRNSCIAARRAIMVRDPQAR 261
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A7S2RTK0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RTK0_9STRA) HSP 1 Score: 347 bits (889), Expect = 6.120e-117 Identity = 178/247 (72.06%), Postives = 207/247 (83.81%), Query Frame = 1
Query: 1 QGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARDSKIR 741
QG YL+ALECMERGLVLRQHFFG++S+EVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTERD GRAVT+NNLACYYRR+G LH+ALQYL+ ALKIEAK+A +PADT+LNTCAVLSQ+GRH+ ALEHAQ ALILLQEE+ +++ G + + P+ADRIAVLAI+YHN+GVE EFLKKF+ SLQSYRKGVEVA+ +LG HA+TITLRNS IAA+RAI ARD +R
Sbjct: 35 QGNYLEALECMERGLVLRQHFFGAESDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDPAGRAVTFNNLACYYRRQGKLHSALQYLQNALKIEAKLARV--------DNPADTYLNTCAVLSQLGRHQSALEHAQQALILLQEEL----SRVVGPMADGKEAPKADRIAVLAISYHNVGVEYEFLKKFDQSLQSYRKGVEVAERFLGSEHAITITLRNSCIAAKRAIMARDPHVR 269
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A7S3YLC4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLC4_HETAK) HSP 1 Score: 347 bits (889), Expect = 9.190e-117 Identity = 175/243 (72.02%), Postives = 200/243 (82.30%), Query Frame = 1
Query: 1 QGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARD 729
QG YL+ALECMERGLVLRQHFFG++SEEVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTERD+ G+AVTYNNLACYYRR+G LH+ALQYL+KALKIE+KM +PADTHLNTCAVLSQ+GRH ALEHAQS++ILLQEE+F G D PR DR+AVL IAYHN+GVEQEFLKK+E S+ SYRKGVEV + +LG HA+T+TLRNS +AARRA+ ARD
Sbjct: 83 QGNYLEALECMERGLVLRQHFFGAESEEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDQKGKAVTYNNLACYYRRQGKLHSALQYLQKALKIESKMKDV--------ENPADTHLNTCAVLSQLGRHTSALEHAQSSMILLQEELFQG-----------DGDPRPDRVAVLGIAYHNIGVEQEFLKKYEQSIASYRKGVEVVERFLGPRHAITVTLRNSLVAARRAVGARD 306
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A7S4A6K0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6K0_9STRA) HSP 1 Score: 341 bits (874), Expect = 6.970e-115 Identity = 175/246 (71.14%), Postives = 201/246 (81.71%), Query Frame = 1
Query: 4 GEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARDSKIR 741
G+YL+ALECMERGLVLRQHFFG+ S+EVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTERD GRAVT+NNLACYYRR+G LHAALQYL+KALKIE ++ E+ +PADT+LN CAVLSQ+GRH+ ALEHAQ ALILLQEE+ + PP+ADR+AVLAIAYHN+GVEQEFLKK SLQSYRKGVEVA+ YLGG+HA+T TLRNS +AARR + ARD + R
Sbjct: 36 GQYLEALECMERGLVLRQHFFGAGSDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDPAGRAVTFNNLACYYRRQGKLHAALQYLQKALKIEGRL--------ESVDNPADTYLNACAVLSQLGRHQSALEHAQQALILLQEELSSVLGSDNAG------PPKADRVAVLAIAYHNVGVEQEFLKKHNQSLQSYRKGVEVAERYLGGDHAITSTLRNSCVAARRTMLARDPQAR 267
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A7S1XJL3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJL3_9STRA) HSP 1 Score: 338 bits (867), Expect = 2.900e-111 Identity = 175/248 (70.56%), Postives = 207/248 (83.47%), Query Frame = 1
Query: 4 GEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGV---AKMGGSIEKKDQP-PRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARDSK 735
G YL+ALECMERGLVLRQHFFGSDS EVWSAC+ VGEMCNLLAMTYLQQ+D++MVLELLKKAEILTERD+ GRAVT+NN ACYYRR+G LHAALQ+L+KAL+IE+++ +P A ADT+LNTCAVLSQ+GRH+ ALEHAQ+ALILLQEE+F G+ A MGG P P DRIAVLAIAYHN+GVEQEFLKKFE SL SYRKG++VA+ +LGG+HA+ +TLRNS AARRA +++D K
Sbjct: 135 GNYLEALECMERGLVLRQHFFGSDSNEVWSACRTVGEMCNLLAMTYLQQQDYAMVLELLKKAEILTERDDKGRAVTFNNFACYYRRQGKLHAALQFLQKALRIESRLVD----VPNA----ADTYLNTCAVLSQLGRHQSALEHAQNALILLQEELFHGIEGGAGMGGEEAGLAPPNPPKDRIAVLAIAYHNIGVEQEFLKKFEMSLTSYRKGIQVAERFLGGDHAIALTLRNSLTAARRAFASKDPK 374
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A7S3HH21_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH21_9STRA) HSP 1 Score: 330 bits (845), Expect = 3.240e-110 Identity = 164/241 (68.05%), Postives = 198/241 (82.16%), Query Frame = 1
Query: 1 QGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISA 723
QG YL+ALECMERGLVLRQHFFG+DS EVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTE+DE GRA T+NNLACYYRR+G LHAALQYL+KALKIE+ + + ++PADTH+N CAVLSQ+GRH+ AL+HAQ+A+ILLQEE+ +G + PP+ADRIAVLAIAYHN+GVEQEFLK++E S+ SY+KGVEVA+ YLG HA+ +TL NS +AA++ +A
Sbjct: 23 QGNYLEALECMERGLVLRQHFFGADSPEVWKACKTVGEMCNLLAMTYLQQEDFNMVLELLKKAEILTEKDEAGRAATFNNLACYYRRQGKLHAALQYLQKALKIESGLTNV--------QNPADTHINACAVLSQLGRHQTALDHAQNAIILLQEELLSPPGVVGAA------PPQADRIAVLAIAYHNIGVEQEFLKRYEQSVLSYKKGVEVAERYLGAKHAICVTLNNSLVAAKKQAAA 249
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A836CET2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CET2_9STRA) HSP 1 Score: 326 bits (835), Expect = 4.760e-109 Identity = 167/224 (74.55%), Postives = 189/224 (84.38%), Query Frame = 1
Query: 1 QGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGS---------IEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQ 645
QG YL+ALECMERGLVLRQHFFGSDS+EVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTERD +G+AVT NNLACYYRR+G LHAALQYL++ALKIEA++ S + + PADTHLNTCAVLSQ+GRH+GAL+HAQSALILLQEE+FGG ++ S + PRADR+AVLAIAYHNMGVEQEFLK+F+HSLQSYRKGVEVAQ
Sbjct: 25 QGNYLEALECMERGLVLRQHFFGSDSDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDAVGKAVTLNNLACYYRRQGKLHAALQYLQRALKIEARLGSRV-------QTPADTHLNTCAVLSQLGRHQGALDHAQSALILLQEELFGGGSRALPSSCAGDGELGLGLSQASPRADRVAVLAIAYHNMGVEQEFLKRFDHSLQSYRKGVEVAQ 241
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A482SDU3_9ARCH (Tetratricopeptide repeat protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDU3_9ARCH) HSP 1 Score: 309 bits (791), Expect = 1.920e-102 Identity = 158/225 (70.22%), Postives = 182/225 (80.89%), Query Frame = 1
Query: 31 MERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAA 705
MERGLVLRQH FG+DSEEVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTE+D GRA TYNNLACYYRR+G LH+ALQYL+KALKIE+K+ + ++PADTH+N CAVLSQ+GRH+ ALEHAQSALILLQEE+ +G + P+ADRIAVLAIAYHN+GVEQEFLK+FE S+ SY+KG EVA+ YLG HA+T TL NS AA
Sbjct: 1 MERGLVLRQHMFGADSEEVWKACKTVGEMCNLLAMTYLQQEDFNMVLELLKKAEILTEKDPAGRAATYNNLACYYRRQGKLHSALQYLQKALKIESKLPNV--------QNPADTHINACAVLSQLGRHQTALEHAQSALILLQEELLSPPGSVGAAA------PQADRIAVLAIAYHNIGVEQEFLKRFEQSILSYKKGAEVAERYLGTKHAITRTLNNSLAAA 211
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A2R5G2B1_9STRA (Clustered mitochondria protein-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2B1_9STRA) HSP 1 Score: 325 bits (833), Expect = 8.670e-100 Identity = 163/238 (68.49%), Postives = 193/238 (81.09%), Query Frame = 1
Query: 1 QGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRA 714
QG+YL+ALECMERGLVLRQHFFG S+EVW+ACK VG+MCNLLAMTYLQQE+FSMVLELLKKAEILTERDE GRAVTYNNLACY+RR G LHAALQYL+KALK+E+++ E + ADTHLN CAVLSQ+GRH GALEHAQ+ALI LQEE+F G DRIAVLAIAYHN+GVEQEFLK+FE ++ SYRKGV++++ +LG +H +T+TLRNS +AAR+A
Sbjct: 462 QGKYLEALECMERGLVLRQHFFGPSSDEVWAACKTVGQMCNLLAMTYLQQEEFSMVLELLKKAEILTERDEHGRAVTYNNLACYFRRTGKLHAALQYLQKALKVESRL--------ENVTNRADTHLNLCAVLSQLGRHAGALEHAQAALIQLQEELFPGALSASAKSSSSAALASTDRIAVLAIAYHNIGVEQEFLKRFEMAIDSYRKGVDISETHLGTDHGITVTLRNSYLAARQA 691 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig9634.19089.1 >prot_F-distichus_contig9634.19089.1 ID=prot_F-distichus_contig9634.19089.1|Name=mRNA_F-distichus_contig9634.19089.1|organism=Fucus distichus monoicous|type=polypeptide|length=263bp MERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLback to top mRNA from alignment at F-distichus_contig9634:9118..10337- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig9634.19089.1 ID=mRNA_F-distichus_contig9634.19089.1|Name=mRNA_F-distichus_contig9634.19089.1|organism=Fucus distichus monoicous|type=mRNA|length=1220bp|location=Sequence derived from alignment at F-distichus_contig9634:9118..10337- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig9634:9118..10337- >mRNA_F-distichus_contig9634.19089.1 ID=mRNA_F-distichus_contig9634.19089.1|Name=mRNA_F-distichus_contig9634.19089.1|organism=Fucus distichus monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at F-distichus_contig9634:9118..10337- (Fucus distichus monoicous)back to top |