mRNA_F-distichus_contig9634.19089.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig9634.19089.1
Unique NamemRNA_F-distichus_contig9634.19089.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: D8LLY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY8_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 2.350e-122
Identity = 184/214 (85.98%), Postives = 193/214 (90.19%), Query Frame = 1
Query:    1 QGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSI-EKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEV 639
            QG+YLQALECMERGLVLRQHFFGSDSEEVWSACK+VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD+ GRAVTYNNLACYYRRRG LH+ALQYL KALKIEAKM S +        HPADTHLNTCAVLSQIGRH+GALEHAQSALILLQEE+FGG A +G +  E  DQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEV
Sbjct:   24 QGDYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRV-------EHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGATVGDAGGEGGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEV 230          
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A7S2CPG4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPG4_9STRA)

HSP 1 Score: 348 bits (893), Expect = 1.040e-117
Identity = 179/247 (72.47%), Postives = 209/247 (84.62%), Query Frame = 1
Query:    1 QGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARDSKIR 741
            QG YL+ALECMERGLVLRQHFFG+DS+EVW ACKVVGEMCNLLAMTYLQQEDF+MVLELLKKAEILTERD  GRAVT+NNLACYYRR+G LHAALQYL+KALKIE K+        +   +PADT+LNTCAVLSQ+GRH+ ALEHAQ ALILLQEE+    +++ G +   ++ P+ADRIAVLAIAYHN+GVE EFLKKF+ SLQSYRKGVEV++ +LG +HA+T+TLRNS IAARRAI  RD + R
Sbjct:   27 QGNYLEALECMERGLVLRQHFFGADSDEVWRACKVVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDNAGRAVTFNNLACYYRRQGKLHAALQYLQKALKIENKL--------DQVDNPADTYLNTCAVLSQLGRHQSALEHAQQALILLQEEL----SRVLGPMADGNEAPKADRIAVLAIAYHNVGVEYEFLKKFDQSLQSYRKGVEVSERFLGPDHAITVTLRNSCIAARRAIMVRDPQAR 261          
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A7S2RTK0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RTK0_9STRA)

HSP 1 Score: 347 bits (889), Expect = 6.120e-117
Identity = 178/247 (72.06%), Postives = 207/247 (83.81%), Query Frame = 1
Query:    1 QGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARDSKIR 741
            QG YL+ALECMERGLVLRQHFFG++S+EVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTERD  GRAVT+NNLACYYRR+G LH+ALQYL+ ALKIEAK+A           +PADT+LNTCAVLSQ+GRH+ ALEHAQ ALILLQEE+    +++ G +    + P+ADRIAVLAI+YHN+GVE EFLKKF+ SLQSYRKGVEVA+ +LG  HA+TITLRNS IAA+RAI ARD  +R
Sbjct:   35 QGNYLEALECMERGLVLRQHFFGAESDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDPAGRAVTFNNLACYYRRQGKLHSALQYLQNALKIEAKLARV--------DNPADTYLNTCAVLSQLGRHQSALEHAQQALILLQEEL----SRVVGPMADGKEAPKADRIAVLAISYHNVGVEYEFLKKFDQSLQSYRKGVEVAERFLGSEHAITITLRNSCIAAKRAIMARDPHVR 269          
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A7S3YLC4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLC4_HETAK)

HSP 1 Score: 347 bits (889), Expect = 9.190e-117
Identity = 175/243 (72.02%), Postives = 200/243 (82.30%), Query Frame = 1
Query:    1 QGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARD 729
            QG YL+ALECMERGLVLRQHFFG++SEEVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTERD+ G+AVTYNNLACYYRR+G LH+ALQYL+KALKIE+KM            +PADTHLNTCAVLSQ+GRH  ALEHAQS++ILLQEE+F G           D  PR DR+AVL IAYHN+GVEQEFLKK+E S+ SYRKGVEV + +LG  HA+T+TLRNS +AARRA+ ARD
Sbjct:   83 QGNYLEALECMERGLVLRQHFFGAESEEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDQKGKAVTYNNLACYYRRQGKLHSALQYLQKALKIESKMKDV--------ENPADTHLNTCAVLSQLGRHTSALEHAQSSMILLQEELFQG-----------DGDPRPDRVAVLGIAYHNIGVEQEFLKKYEQSIASYRKGVEVVERFLGPRHAITVTLRNSLVAARRAVGARD 306          
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A7S4A6K0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6K0_9STRA)

HSP 1 Score: 341 bits (874), Expect = 6.970e-115
Identity = 175/246 (71.14%), Postives = 201/246 (81.71%), Query Frame = 1
Query:    4 GEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARDSKIR 741
            G+YL+ALECMERGLVLRQHFFG+ S+EVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTERD  GRAVT+NNLACYYRR+G LHAALQYL+KALKIE ++        E+  +PADT+LN CAVLSQ+GRH+ ALEHAQ ALILLQEE+   +            PP+ADR+AVLAIAYHN+GVEQEFLKK   SLQSYRKGVEVA+ YLGG+HA+T TLRNS +AARR + ARD + R
Sbjct:   36 GQYLEALECMERGLVLRQHFFGAGSDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDPAGRAVTFNNLACYYRRQGKLHAALQYLQKALKIEGRL--------ESVDNPADTYLNACAVLSQLGRHQSALEHAQQALILLQEELSSVLGSDNAG------PPKADRVAVLAIAYHNVGVEQEFLKKHNQSLQSYRKGVEVAERYLGGDHAITSTLRNSCVAARRTMLARDPQAR 267          
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A7S1XJL3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJL3_9STRA)

HSP 1 Score: 338 bits (867), Expect = 2.900e-111
Identity = 175/248 (70.56%), Postives = 207/248 (83.47%), Query Frame = 1
Query:    4 GEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGV---AKMGGSIEKKDQP-PRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARDSK 735
            G YL+ALECMERGLVLRQHFFGSDS EVWSAC+ VGEMCNLLAMTYLQQ+D++MVLELLKKAEILTERD+ GRAVT+NN ACYYRR+G LHAALQ+L+KAL+IE+++      +P A    ADT+LNTCAVLSQ+GRH+ ALEHAQ+ALILLQEE+F G+   A MGG       P P  DRIAVLAIAYHN+GVEQEFLKKFE SL SYRKG++VA+ +LGG+HA+ +TLRNS  AARRA +++D K
Sbjct:  135 GNYLEALECMERGLVLRQHFFGSDSNEVWSACRTVGEMCNLLAMTYLQQQDYAMVLELLKKAEILTERDDKGRAVTFNNFACYYRRQGKLHAALQFLQKALRIESRLVD----VPNA----ADTYLNTCAVLSQLGRHQSALEHAQNALILLQEELFHGIEGGAGMGGEEAGLAPPNPPKDRIAVLAIAYHNIGVEQEFLKKFEMSLTSYRKGIQVAERFLGGDHAIALTLRNSLTAARRAFASKDPK 374          
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A7S3HH21_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH21_9STRA)

HSP 1 Score: 330 bits (845), Expect = 3.240e-110
Identity = 164/241 (68.05%), Postives = 198/241 (82.16%), Query Frame = 1
Query:    1 QGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISA 723
            QG YL+ALECMERGLVLRQHFFG+DS EVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTE+DE GRA T+NNLACYYRR+G LHAALQYL+KALKIE+ + +         ++PADTH+N CAVLSQ+GRH+ AL+HAQ+A+ILLQEE+      +G +      PP+ADRIAVLAIAYHN+GVEQEFLK++E S+ SY+KGVEVA+ YLG  HA+ +TL NS +AA++  +A
Sbjct:   23 QGNYLEALECMERGLVLRQHFFGADSPEVWKACKTVGEMCNLLAMTYLQQEDFNMVLELLKKAEILTEKDEAGRAATFNNLACYYRRQGKLHAALQYLQKALKIESGLTNV--------QNPADTHINACAVLSQLGRHQTALDHAQNAIILLQEELLSPPGVVGAA------PPQADRIAVLAIAYHNIGVEQEFLKRYEQSVLSYKKGVEVAERYLGAKHAICVTLNNSLVAAKKQAAA 249          
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A836CET2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CET2_9STRA)

HSP 1 Score: 326 bits (835), Expect = 4.760e-109
Identity = 167/224 (74.55%), Postives = 189/224 (84.38%), Query Frame = 1
Query:    1 QGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGS---------IEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQ 645
            QG YL+ALECMERGLVLRQHFFGSDS+EVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTERD +G+AVT NNLACYYRR+G LHAALQYL++ALKIEA++ S +       + PADTHLNTCAVLSQ+GRH+GAL+HAQSALILLQEE+FGG ++   S         +      PRADR+AVLAIAYHNMGVEQEFLK+F+HSLQSYRKGVEVAQ
Sbjct:   25 QGNYLEALECMERGLVLRQHFFGSDSDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDAVGKAVTLNNLACYYRRQGKLHAALQYLQRALKIEARLGSRV-------QTPADTHLNTCAVLSQLGRHQGALDHAQSALILLQEELFGGGSRALPSSCAGDGELGLGLSQASPRADRVAVLAIAYHNMGVEQEFLKRFDHSLQSYRKGVEVAQ 241          
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A482SDU3_9ARCH (Tetratricopeptide repeat protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDU3_9ARCH)

HSP 1 Score: 309 bits (791), Expect = 1.920e-102
Identity = 158/225 (70.22%), Postives = 182/225 (80.89%), Query Frame = 1
Query:   31 MERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAA 705
            MERGLVLRQH FG+DSEEVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTE+D  GRA TYNNLACYYRR+G LH+ALQYL+KALKIE+K+ +         ++PADTH+N CAVLSQ+GRH+ ALEHAQSALILLQEE+      +G +       P+ADRIAVLAIAYHN+GVEQEFLK+FE S+ SY+KG EVA+ YLG  HA+T TL NS  AA
Sbjct:    1 MERGLVLRQHMFGADSEEVWKACKTVGEMCNLLAMTYLQQEDFNMVLELLKKAEILTEKDPAGRAATYNNLACYYRRQGKLHSALQYLQKALKIESKLPNV--------QNPADTHINACAVLSQLGRHQTALEHAQSALILLQEELLSPPGSVGAAA------PQADRIAVLAIAYHNIGVEQEFLKRFEQSILSYKKGAEVAERYLGTKHAITRTLNNSLAAA 211          
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Match: A0A2R5G2B1_9STRA (Clustered mitochondria protein-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2B1_9STRA)

HSP 1 Score: 325 bits (833), Expect = 8.670e-100
Identity = 163/238 (68.49%), Postives = 193/238 (81.09%), Query Frame = 1
Query:    1 QGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMASFLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRA 714
            QG+YL+ALECMERGLVLRQHFFG  S+EVW+ACK VG+MCNLLAMTYLQQE+FSMVLELLKKAEILTERDE GRAVTYNNLACY+RR G LHAALQYL+KALK+E+++        E   + ADTHLN CAVLSQ+GRH GALEHAQ+ALI LQEE+F G                 DRIAVLAIAYHN+GVEQEFLK+FE ++ SYRKGV++++ +LG +H +T+TLRNS +AAR+A
Sbjct:  462 QGKYLEALECMERGLVLRQHFFGPSSDEVWAACKTVGQMCNLLAMTYLQQEEFSMVLELLKKAEILTERDEHGRAVTYNNLACYFRRTGKLHAALQYLQKALKVESRL--------ENVTNRADTHLNLCAVLSQLGRHAGALEHAQAALIQLQEELFPGALSASAKSSSSAALASTDRIAVLAIAYHNIGVEQEFLKRFEMAIDSYRKGVDISETHLGTDHGITVTLRNSYLAARQA 691          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9634.19089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLY8_ECTSI2.350e-12285.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2CPG4_9STRA1.040e-11772.47Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2RTK0_9STRA6.120e-11772.06Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S3YLC4_HETAK9.190e-11772.02Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4A6K0_9STRA6.970e-11571.14Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1XJL3_9STRA2.900e-11170.56Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S3HH21_9STRA3.240e-11068.05Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A836CET2_9STRA4.760e-10974.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482SDU3_9ARCH1.920e-10270.22Tetratricopeptide repeat protein n=1 Tax=archaeon ... [more]
A0A2R5G2B1_9STRA8.670e-10068.49Clustered mitochondria protein-like n=1 Tax=Hondae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9634contigF-distichus_contig9634:9118..10337 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score338.6
Seed ortholog evalue2.7e-90
Seed eggNOG ortholog2880.D8LLY8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Tetratricopeptide repeat
EggNOG OGs28ZWJ@1,2R6RA@2759
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-14_002170.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size819
Cds size789
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9634.19089.1prot_F-distichus_contig9634.19089.1Fucus distichus monoicouspolypeptideF-distichus_contig9634 9118..10307 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931140.8652256-CDS-F-distichus_contig9634:9117..93001622931140.8652256-CDS-F-distichus_contig9634:9117..9300Fucus distichus monoicousCDSF-distichus_contig9634 9118..9300 -
1690886175.585887-CDS-F-distichus_contig9634:9117..93001690886175.585887-CDS-F-distichus_contig9634:9117..9300Fucus distichus monoicousCDSF-distichus_contig9634 9118..9300 -
1622931140.8821254-CDS-F-distichus_contig9634:9454..97301622931140.8821254-CDS-F-distichus_contig9634:9454..9730Fucus distichus monoicousCDSF-distichus_contig9634 9455..9730 -
1690886175.6039948-CDS-F-distichus_contig9634:9454..97301690886175.6039948-CDS-F-distichus_contig9634:9454..9730Fucus distichus monoicousCDSF-distichus_contig9634 9455..9730 -
1622931140.89506-CDS-F-distichus_contig9634:9977..103071622931140.89506-CDS-F-distichus_contig9634:9977..10307Fucus distichus monoicousCDSF-distichus_contig9634 9978..10307 -
1690886175.6181617-CDS-F-distichus_contig9634:9977..103071690886175.6181617-CDS-F-distichus_contig9634:9977..10307Fucus distichus monoicousCDSF-distichus_contig9634 9978..10307 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931140.9110177-UTR-F-distichus_contig9634:10307..103371622931140.9110177-UTR-F-distichus_contig9634:10307..10337Fucus distichus monoicousUTRF-distichus_contig9634 10308..10337 -
1690886175.627642-UTR-F-distichus_contig9634:10307..103371690886175.627642-UTR-F-distichus_contig9634:10307..10337Fucus distichus monoicousUTRF-distichus_contig9634 10308..10337 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig9634.19089.1

>prot_F-distichus_contig9634.19089.1 ID=prot_F-distichus_contig9634.19089.1|Name=mRNA_F-distichus_contig9634.19089.1|organism=Fucus distichus monoicous|type=polypeptide|length=263bp
MERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELL
KKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMAS
FLGMLPEASRHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGG
VAKMGGSIEKKDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKG
VEVAQMYLGGNHAVTITLRNSTIAARRAISARDSKIREELKRRHSRRVRT
RERGSRASSSTRV
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mRNA from alignment at F-distichus_contig9634:9118..10337-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig9634.19089.1 ID=mRNA_F-distichus_contig9634.19089.1|Name=mRNA_F-distichus_contig9634.19089.1|organism=Fucus distichus monoicous|type=mRNA|length=1220bp|location=Sequence derived from alignment at F-distichus_contig9634:9118..10337- (Fucus distichus monoicous)
CAGGGCGAATACTTGCAGGCACTCGAGTGCATGGAGCGGGGGCTCGTCCT CAGGCAGCATTTCTTCGGCAGTGACAGTGAGGAGGTGTGGAGCGCGTGCA AAGTCGTCGGCGAGATGTGCAACCTCCTAGCCATGACCTACCTCCAGCAA GAGGACTTTAGCATGGTGCTGGAGTTACTCAAGAAGGCGGAAATCCTGAC GGAGAGGGACGAGATCGGCCGAGCGGTTACGTACAACAATCTCGCGTGCT ATTATCGACGACGCGGAACGCTGCACGCCGCGCTGCAGTACCTCGAGAAG GCCCTCAAGATCGAAGCAAAGATGGCAAGTTTCCTTGGAATGTTACCCGA GGCCTCGCGAGTGAGACCCCTTCTCAGTTTAGTGAGTCTCTTGACATTCT TCTCTCCGTCCGACGTTTTTCCTCTCTCGAAGCGCGTACTGCTGTCGAAG CGTGACGTGCATGGACACTATCTACGGGCTGTTTGAAGGGGACTGGCACA TGTTCATGGTATCATAGCGCCGCCGTCCCTTCGACTCTCGCCGCCGTTTT CCCATCGCGCCAATTTGCGAAACTGGTCTAAACACCGAGCAGGGCTCCCG CGTGGAGCACCCGGCAGATACACACCTCAACACGTGCGCGGTTCTGTCTC AAATCGGAAGACATCGGGGGGCCTTGGAACACGCACAGTCGGCGCTGATC CTTCTGCAAGAAGAAATTTTCGGCGGAGTGGCTAAGATGGGAGGATCCAT AGAGAAGAAAGATCAGCCCCCACGGGCGGACAGAATCGCGGTTCTGGCAA TCGCTTACCACAACATGGGCGTGGAGCAGGAGTTTCTGAAGAAGTTTGAG CACAGTTTGCAATCCTACAGGAAGGGCGTCGAGGTATACTCGCAGCATCT ACTGTAGTAAGCAATTACTCTTAATTTTGTCCAGAACAACCTGGGTCGGG TCAAGGACGTTATACCACATGTCTCTTCGAGCTCGCGTTATAGCTTTCGG CGATGAAGCACTCACGGGATTTGTCCCGCCGTCGTAGGTGGCCCAAATGT ATCTCGGAGGCAATCACGCAGTGACGATCACGCTCCGGAATTCCACGATT GCTGCCCGCCGAGCGATAAGCGCAAGGGATAGCAAAATACGGGAAGAGCT CAAACGCCGACACAGTCGAAGGGTAAGAACAAGAGAGCGAGGAAGCCGAG CGTCTTCCAGTACCCGAGTA
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Coding sequence (CDS) from alignment at F-distichus_contig9634:9118..10337-

>mRNA_F-distichus_contig9634.19089.1 ID=mRNA_F-distichus_contig9634.19089.1|Name=mRNA_F-distichus_contig9634.19089.1|organism=Fucus distichus monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at F-distichus_contig9634:9118..10337- (Fucus distichus monoicous)
ATGGAGCGGGGGCTCGTCCTCAGGCAGCATTTCTTCGGCAGTGACAGTGA
GGAGGTGTGGAGCGCGTGCAAAGTCGTCGGCGAGATGTGCAACCTCCTAG
CCATGACCTACCTCCAGCAAGAGGACTTTAGCATGGTGCTGGAGTTACTC
AAGAAGGCGGAAATCCTGACGGAGAGGGACGAGATCGGCCGAGCGGTTAC
GTACAACAATCTCGCGTGCTATTATCGACGACGCGGAACGCTGCACGCCG
CGCTGCAGTACCTCGAGAAGGCCCTCAAGATCGAAGCAAAGATGGCAAGT
TTCCTTGGAATGTTACCCGAGGCCTCGCGAATGGAGCGGGGGCTCGTCCT
CAGGCAGCATTTCTTCGGCAGTGACAGTGAGGAGGTGTGGAGCGCGTGCA
AAGTCGTCGGCGAGATGTGCAACCTCCTAGCCATGACCTACCTCCAGCAA
GAGGACTTTAGCATGGTGCTGGAGTTACTCAAGAAGGCGGAAATCCTGAC
GGAGAGGGACGAGATCGGCCGAGCGGTTACGTACAACAATCTCGCGTGCT
ATTATCGACGACGCGGAACGCTGCACGCCGCGCTGCAGTACCTCGAGAAG
GCCCTCAAGATCGAAGCAAAGATGGCAAGTTTCCTTGGAATGTTACCCGA
GGCCTCGCGACACCCGGCAGATACACACCTCAACACGTGCGCGGTTCTGT
CTCAAATCGGAAGACATCGGGGGGCCTTGGAACACGCACAGTCGGCGCTG
ATCCTTCTGCAAGAAGAAATTTTCGGCGGAGTGGCTAAGATGGGAGGATC
CATAGAGAAGAAAGATCAGCCCCCACGGGCGGACAGAATCGCGGTTCTGG
CAATCGCTTACCACAACATGGGCGTGGAGCAGGAGTTTCTGAAGAAGTTT
GAGCACAGTTTGCAATCCTACAGGAAGGGCGTCGAGCACCCGGCAGATAC
ACACCTCAACACGTGCGCGGTTCTGTCTCAAATCGGAAGACATCGGGGGG
CCTTGGAACACGCACAGTCGGCGCTGATCCTTCTGCAAGAAGAAATTTTC
GGCGGAGTGGCTAAGATGGGAGGATCCATAGAGAAGAAAGATCAGCCCCC
ACGGGCGGACAGAATCGCGGTTCTGGCAATCGCTTACCACAACATGGGCG
TGGAGCAGGAGTTTCTGAAGAAGTTTGAGCACAGTTTGCAATCCTACAGG
AAGGGCGTCGAGGTGGCCCAAATGTATCTCGGAGGCAATCACGCAGTGAC
GATCACGCTCCGGAATTCCACGATTGCTGCCCGCCGAGCGATAAGCGCAA
GGGATAGCAAAATACGGGAAGAGCTCAAACGCCGACACAGTCGAAGGGTA
AGAACAAGAGAGCGAGGAAGCCGAGCGTCTTCCAGTACCCGAGTAGTGGC
CCAAATGTATCTCGGAGGCAATCACGCAGTGACGATCACGCTCCGGAATT
CCACGATTGCTGCCCGCCGAGCGATAAGCGCAAGGGATAGCAAAATACGG
GAAGAGCTCAAACGCCGACACAGTCGAAGGGTAAGAACAAGAGAGCGAGG
AAGCCGAGCGTCTTCCAGTACCCGAGTA
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