mRNA_F-distichus_contig9634.19088.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig9634.19088.1 vs. uniprot
Match: D7G107_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G107_ECTSI) HSP 1 Score: 223 bits (567), Expect = 3.040e-71 Identity = 110/170 (64.71%), Postives = 126/170 (74.12%), Query Frame = 1
Query: 1 LPQILALDPSCCGPTAPGPNDMVIHYRNYKAELGEEQYEKLHFQDLDFNFYDTVLKSTQDR----PETVWVVGEFHKYNPLVKRLQEEHGNVKIAGMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHIVVDDDPRYIYRDANGLVVHP 498
L +I+ALDPSCCGPTAPGP D+VIH+RNY+AEL EQYEKL F+DLD+ FY+ VL+ + PETVWVVGEF+ PL KRLQ++H NVK A MV DQF AFCFLSRAPR +MA STFSWW AFLG TEVHFP K VTG I VD+ RY+YRD G VV P
Sbjct: 43 LRKIMALDPSCCGPTAPGPGDLVIHHRNYRAELTAEQYEKLIFKDLDYEFYEAVLRDAAESAAGPPETVWVVGEFNDEEPLFKRLQQDHPNVKRAEMVEDQFHAFCFLSRAPRLVMAHSTFSWWVAFLGVGTEVHFPLTKQNKGVTGPSIAVDEG-RYVYRDEAGRVVPP 211
BLAST of mRNA_F-distichus_contig9634.19088.1 vs. uniprot
Match: D7G104_ECTSI (Alpha-1,2-fucosyltransferase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G104_ECTSI) HSP 1 Score: 221 bits (562), Expect = 2.700e-68 Identity = 109/170 (64.12%), Postives = 126/170 (74.12%), Query Frame = 1
Query: 1 LPQILALDPSCCGPTAPGPNDMVIHYRNYKAELGEEQYEKLHFQDLDFNFYDTVLKSTQDR----PETVWVVGEFHKYNPLVKRLQEEHGNVKIAGMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHIVVDDDPRYIYRDANGLVVHP 498
L +I+ALDPSCCGPTAPGP D+VIH+RNY+AEL EQYEKL F+DLD+ FY+ VL+ + PETVWVVGEF+ PL KRLQ++H NVK A MV DQF AFCFLSRAPR +MA STFSWW AFLG TEVHFP + VTG I VD+ RY+YRD G VV P
Sbjct: 210 LRKIMALDPSCCGPTAPGPGDLVIHHRNYRAELTAEQYEKLIFKDLDYEFYEAVLRDAAESAAGPPETVWVVGEFNDEEPLFKRLQQDHPNVKRAEMVEDQFHAFCFLSRAPRLVMAHSTFSWWVAFLGVGTEVHFPLTRQNQGVTGPSIAVDEG-RYVYRDEAGRVVPP 378
BLAST of mRNA_F-distichus_contig9634.19088.1 vs. uniprot
Match: F2TVY1_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TVY1_SALR5) HSP 1 Score: 94.0 bits (232), Expect = 2.800e-19 Identity = 56/167 (33.53%), Postives = 94/167 (56.29%), Query Frame = 1
Query: 13 LALDPSCCGPTA-----PGPNDMVIHYRNYKAELGEE-QYEKLH-FQDLDFNFYDTVLKSTQDRP--ETVWVVGEFHKYNPLVKRLQEEHGNVKIAGMVTDQFRA---FCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHIVVD-DDPRYIYRD 474
L +D SC + PGP D+V+H R Y GEE +Y+ F DL +++YD +L+ Q + +TVW+ +++P+ ++L ++G I G + + + + F+ A R +M+QST++WWAA+LG+A EVH+P RH + D+PRY++ D
Sbjct: 342 LRIDTSCLAAQSLPLSLPGPRDIVVHLRAYHGCEGEEHEYDPTEAFVDLPWDYYDRILQRYQRKGGWDTVWLASRCGEHHPIAQQLMTKYGARVIQGDGSKNWASMHDWLFMRSARRLVMSQSTYAWWAAWLGDAEEVHYPLAGDWWGKGPRHTLYPVDEPRYVFHD 508
BLAST of mRNA_F-distichus_contig9634.19088.1 vs. uniprot
Match: A0A349D2R7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Peribacteria bacterium TaxID=2053688 RepID=A0A349D2R7_9BACT) HSP 1 Score: 68.6 bits (166), Expect = 1.130e-10 Identity = 46/152 (30.26%), Postives = 72/152 (47.37%), Query Frame = 1
Query: 19 LDPSCCGPTAPGPNDMVIHYRNYKAELGEEQYEKLHFQDLDFNFYDTVLKSTQDRPETVWVVGEFHKYNPLVKRLQEEHGNVKIAGMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHIV--VDDDPRYIY 468
+ P+C P P +V+H R Y ++ L F+FY VLK D V + +P ++ + +K ++ D FCFL A + ++QST+SWWAA+L +ATE++FP T + R + D+PRY Y
Sbjct: 101 MQPACSAAAKPDPRALVMHVRR-------GDYLRVEGYPLPFSFYKDVLKRA-DFDHLVICTDD--PRDPFFRKFRHHDPEIKSGDLLED----FCFLKSAKKIALSQSTYSWWAAYLSDATEIYFPRSLTGPFSSSRPDIDLEVDEPRYRY 238
BLAST of mRNA_F-distichus_contig9634.19088.1 vs. uniprot
Match: F0YD20_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YD20_AURAN) HSP 1 Score: 62.8 bits (151), Expect = 2.320e-8 Identity = 42/154 (27.27%), Postives = 72/154 (46.75%), Query Frame = 1
Query: 49 PGPNDMVIHYRNYKAELGEEQYEKLHFQDLDFNFYDTVLKSTQDRPETVWVVGEFHKYNP-LVKRLQEEHGNVKIAGMVTDQFRA---------FCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHIVVDDDPRYIYRDAN 480
P P+D+V+H R + L +Y N+++ + + + P + VV + P +V+ L E G ++ + D F +++RA R ++ +ST+SWWAA+LG A EVH P +G V +P Y++ D N
Sbjct: 280 PRPDDVVVHVRLCDSPLHFYKYYSYE------NYFEHIFRHLEPAPARIRVVTGCDERKPGVVRELVERLGAERVFTAIADGTSKKPHRSVAADFLYMTRAKRLVVTESTYSWWAAYLGAADEVHAP-------ASGVVPVPYQEPHYVFHDIN 420
BLAST of mRNA_F-distichus_contig9634.19088.1 vs. uniprot
Match: A0A7S3JMN3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JMN3_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 7.030e-8 Identity = 51/160 (31.87%), Postives = 75/160 (46.88%), Query Frame = 1
Query: 49 PGPNDMVIHYRNYKAELGEEQYEKLHFQDLDFNFYDTVLKSTQDRP------------ETVWVVGEFHK--YNPLVKR-LQEEHGNV---KIAGMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHIVVDDDPRYIYRD 474
P D+VIH R L Y + D+D N++ +L+ + RP + V E K ++ +V R L + N K +G+ D F +L+ A R I+ +STFSWWAA L NATE+H P +G V DDPR+++ D
Sbjct: 359 PSTKDLVIHIR-----LCNAPYHVYKYFDID-NYFGPLLQRIKPRPGGSIRIITTCQAKDRGVTEELKKPPFHAIVTRPLLYDSTNSQLDKASGLAAD----FLYLAHATRLIICESTFSWWAAILSNATEIHAP-------ASGMVPVAIDDPRFVFHD 501
BLAST of mRNA_F-distichus_contig9634.19088.1 vs. uniprot
Match: A0A8J2WY98_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WY98_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 3.670e-6 Identity = 40/126 (31.75%), Postives = 64/126 (50.79%), Query Frame = 1
Query: 49 PGPNDMVIHYRNYKAELGEEQYEKLHFQDLDFNFYDTVLKSTQDRPETVWVVGEFH-KYNPLVKRLQEEHGNVKIA-----GMVTDQFRA---FCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFP 399
P +D+V+H R + + +Y N++ VL Q P+ + +V + + N +VK L E N ++A G T F +++RA R ++ +STFS+WAAFLG+A EVH P
Sbjct: 321 PDSDDVVVHVRLCDGPVHQYKYYSWK------NYFSHVLPRLQPPPKRIKIVTACNPRRNGVVKDLLENVPNAEVAKPRLRGSPTTAKSVAADFAYMARAKRLVVTESTFSFWAAFLGDAHEVHAP 440
BLAST of mRNA_F-distichus_contig9634.19088.1 vs. uniprot
Match: A0A8J2T2Q7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2Q7_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 2.240e-5 Identity = 45/153 (29.41%), Postives = 70/153 (45.75%), Query Frame = 1
Query: 46 APGPNDMVIHYRNYKAELGEEQYEKLHFQDLDFNFYDTVLKSTQDRPETVWVVGEFHKYNPLVKRLQEEHGNVKIAGMVTDQFRA----------FCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHIVVDDDPRYIYRD 474
+P D++IH R K + + KL+ + N++ V + V V P V R +H N A +V+ + R F +L+RA R ++ +ST+SWWAA++G ATEVH P G V D+ RY++ D
Sbjct: 79 SPRKTDVIIHVRLCKTQ----NHYKLYTYE---NYFRHVFARLDNWRGRVKVCAACDAARPGVVRDLVKHLN---ATVVSPRIRGDGRGRSVEADFAYLARATRLVVTESTYSWWAAYVGQATEVHAPG-------VGTVPVPADERRYVFHD 214
BLAST of mRNA_F-distichus_contig9634.19088.1 vs. uniprot
Match: A0A1Y5SZ05_9RHOB (Uncharacterized protein n=1 Tax=Pseudoruegeria aquimaris TaxID=393663 RepID=A0A1Y5SZ05_9RHOB) HSP 1 Score: 52.8 bits (125), Expect = 4.920e-5 Identity = 45/142 (31.69%), Postives = 68/142 (47.89%), Query Frame = 1
Query: 52 GPNDMVIHYRNYKA-ELGEEQYEKLHFQDLDFNFYDTVLKSTQDRPETVWVVGEFHKYNPLVKRLQEEHGNVKIAGMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFP----FQPTRKAVTGRHIVVDDDPRY 462
G +D+VIH R E G Q H+ L FY+ V++ + RP V +G Y+ +++ + ++ G V F + RA I A STFSW AA+L AT +H+P F P ++ G ++ DPRY
Sbjct: 118 GDDDIVIHVRLEDILEPGRHQ----HYGPLPLGFYEQVIRDSGKRPVFVGQMGS-DWYSDMLRAAFPDALLLE-GGSVLHDFET---IRRAKHIIPAISTFSWMAAWLSEATSIHYPLSGLFHPLQRP--GIDMMPRKDPRY 248 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9634.19088.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig9634.19088.1 >prot_F-distichus_contig9634.19088.1 ID=prot_F-distichus_contig9634.19088.1|Name=mRNA_F-distichus_contig9634.19088.1|organism=Fucus distichus monoicous|type=polypeptide|length=169bp LPQILALDPSCCGPTAPGPNDMVIHYRNYKAELGEEQYEKLHFQDLDFNFback to top mRNA from alignment at F-distichus_contig9634:6511..7620+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig9634.19088.1 ID=mRNA_F-distichus_contig9634.19088.1|Name=mRNA_F-distichus_contig9634.19088.1|organism=Fucus distichus monoicous|type=mRNA|length=1110bp|location=Sequence derived from alignment at F-distichus_contig9634:6511..7620+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig9634:6511..7620+ >mRNA_F-distichus_contig9634.19088.1 ID=mRNA_F-distichus_contig9634.19088.1|Name=mRNA_F-distichus_contig9634.19088.1|organism=Fucus distichus monoicous|type=CDS|length=1014bp|location=Sequence derived from alignment at F-distichus_contig9634:6511..7620+ (Fucus distichus monoicous)back to top |