mRNA_F-distichus_contig9624.19074.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig9624.19074.1
Unique NamemRNA_F-distichus_contig9624.19074.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig9624.19074.1 vs. uniprot
Match: A0A6H5KCI0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI0_9PHAE)

HSP 1 Score: 386 bits (991), Expect = 1.590e-125
Identity = 192/310 (61.94%), Postives = 235/310 (75.81%), Query Frame = 1
Query:   16 AEFFCEGLEGVEELDDNDLGFQARDAGMSMCSCPEGRVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDDNLPSDGVPPADFDAPVNATDNGKDSSATAIVASALVEIYAETGDSKYLAWAEKYLSAVLTADYYLPDATDGYQSILRRATAKWGET--ERGAVFGDYFVLEAMV 939
            AEF+C GLEG+E  +DND GFQ               +LNSFGLGYRL+ S    + Y +RVLTGA++L+ FRW  NIPA+WSWENPS RP+W+RAVNVDM+MN+EI+LWA +NGG     E VA HAD+TWKDIVR+DNST HVA YD DTG+L+E GTYQGY ++STWTRGQAWA+YG  M+YR+L E +FL+RS+  L+Y++DNLP D +PPADFDAP +ATDNGKDSSA AIV+S L+E++ ET D  YL  ++ YLSA+     Y PDATDGYQSILRRA  +WG+   E GAVFGDYF LE MV
Sbjct:  147 AEFYCSGLEGLESEEDNDTGFQ---------------ILNSFGLGYRLTGS----EEYLQRVLTGAEALHGFRWDGNIPAYWSWENPSRRPDWDRAVNVDMMMNLEILLWAGLNGGEDHELE-VAGHADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLEYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQTYLSALFAGTCYQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMV 436          
BLAST of mRNA_F-distichus_contig9624.19074.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 369 bits (947), Expect = 5.680e-121
Identity = 190/309 (61.49%), Postives = 234/309 (75.73%), Query Frame = 1
Query:   16 AEFFCEGLEGVEELDDNDLGFQARDAGMSMCSCPEGRVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDDNLPSDGVPPADFDAPVNATDNGKDSSATAIVASALVEIYAETGDSKYLAWAEKYLSAVL-TADYYLPDATDGYQSILRRATAKWGETERGAVFGDYFVLEAMV 939
            AE   EGLEGVE LDDNDLGFQ                LNSFGLGYRL    S    +KER L GA+SLYDFR+ +NIPAFWSW+ PS  P+WERAVNVDMIMNMEIMLWA+ NGG+T Y++ V +HADTTW D+VR+D ST+HVADYDP TGDL ++GTYQG+ D+STW+RGQAWAVYG  M++RYL++ +FL+RS+  L YF DNLP D VP ADFDAP N+ DN KDSSATAIVASAL E++  TG+  YL  A+++LS++L ++ Y+   ATDG+Q++LR + A WGE   G+V GDYF+LEAMV
Sbjct:   22 AEDIQEGLEGVELLDDNDLGFQ---------------TLNSFGLGYRLVGKGS----FKERTLAGAESLYDFRYASNIPAFWSWKKPSKEPQWERAVNVDMIMNMEIMLWAANNGGDTDYSDAVENHADTTWADLVREDYSTYHVADYDPSTGDLEDKGTYQGWQDDSTWSRGQAWAVYGFAMVHRYLKDERFLDRSILTLGYFVDNLPDDNVPYADFDAPENS-DNPKDSSATAIVASALFELFELTGEPTYLEKAQEFLSSLLLSSTYFDSSATDGWQALLRESAAAWGEDSVGSVTGDYFLLEAMV 310          
BLAST of mRNA_F-distichus_contig9624.19074.1 vs. uniprot
Match: A0A6H5JQV0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV0_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 4.040e-120
Identity = 185/312 (59.29%), Postives = 236/312 (75.64%), Query Frame = 1
Query:    7 QEKAEFFCEGLEGVEELDDNDLGFQARDAGMSMCSCPEGRVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDDNLPSDGVPPADFDAPVNATDNGKDSSATAIVASALVEIYAETGDSKYLAWAEKYL-SAVLTADYYLPDATDGYQSILRRATAKWGETERGAVFGDYFVLEAMV 939
            Q  AE   EGLEG+E LDDNDLGFQ                LNSFGLGYRL  ++S    +K+R L+GA SLYD+R+ +NIPAFWSW NP++ P+WERAVNVDMIMNMEIMLWA+VNGG+  Y++ V +HADTTW D+VRDD ST+HVADYDP TG+LV++GTYQG+ D+STW+RGQAWA+YG  M+YRYL+E +FL+ ++  L YF DNLP D VP ADFDAPV++ DN KDSSATAIV SAL E++  TG+  YL  A+++L S +L++ Y+   ATDG+Q+ILR + A WG+   G+V  DYF+LE+MV
Sbjct:   19 QTYAEDMQEGLEGIEVLDDNDLGFQ---------------TLNSFGLGYRLVGTTS----FKDRTLSGAQSLYDYRYVSNIPAFWSWANPTNEPQWERAVNVDMIMNMEIMLWAAVNGGDAEYSDAVENHADTTWADLVRDDYSTYHVADYDPSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFTMVYRYLKEQRFLDYAINTLSYFVDNLPDDNVPYADFDAPVDS-DNPKDSSATAIVTSALFELFELTGEPTYLEKAQEFLTSLLLSSTYFDSSATDGWQAILRNSAAAWGDEAVGSVTADYFLLESMV 310          
BLAST of mRNA_F-distichus_contig9624.19074.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 3.900e-117
Identity = 182/309 (58.90%), Postives = 231/309 (74.76%), Query Frame = 1
Query:   16 AEFFCEGLEGVEELDDNDLGFQARDAGMSMCSCPEGRVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDDNLPSDGVPPADFDAPVNATDNGKDSSATAIVASALVEIYAETGDSKYLAWAEKYLSAVLTA-DYYLPDATDGYQSILRRATAKWGETERGAVFGDYFVLEAMV 939
            AE   EGLEGVE LDDNDLGFQ                LNSFGLGYRL  +SS +D      L+GA SLYD+R+ +NIPAFWSW NP S P+WERAVNVDMIMNMEIMLWA+VN G+  Y++   +HADTTW D+VRDD STFHVADY+  TG+LV++GTYQG+ D+STW+RGQAWA+YG +M++RYLQ+P+FL+  +  L YF DNLP D VP ADFDAPV++ DN KDSSATAIV SAL E++ +TG+  YL   +++LS++L + +Y+   ATDG+Q+ILR + A WG+   G+V  DYF+LE+MV
Sbjct:   80 AEDMQEGLEGVELLDDNDLGFQ---------------TLNSFGLGYRLVGTSSFKDI----TLSGAQSLYDYRYVSNIPAFWSWANPKSEPQWERAVNVDMIMNMEIMLWAAVNDGDAEYSDAAENHADTTWADLVRDDYSTFHVADYNKSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFIMVHRYLQKPRFLDYGINTLSYFVDNLPDDNVPYADFDAPVDS-DNPKDSSATAIVTSALFELFEQTGEPSYLEKGQEFLSSLLLSPNYFDSSATDGWQAILRNSAAAWGDAAVGSVTADYFLLESMV 368          
BLAST of mRNA_F-distichus_contig9624.19074.1 vs. uniprot
Match: D8LHN8_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN8_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 6.030e-106
Identity = 156/249 (62.65%), Postives = 193/249 (77.51%), Query Frame = 1
Query:   16 AEFFCEGLEGVEELDDNDLGFQARDAGMSMCSCPEGRVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDDNLPSDGVPPADFDAPVNATDNGKDSSATAIVASALVEIYAETG 762
            AEF+C GLEG+E  +DND GFQ               +LNSFGLGYRL+ S    D Y +RVLTGA++L+DFRW  NIPA+WSWENP+ RP+W+RAVNVDM+MN+EI+LWA +NGG     E V  HAD+TWKDIVR+DNST HVA YD DTG+ +E GTYQGY ++STWTRGQAWA+YG  M+YR+L E +FL+RS+  LKY++DNLP D +PPADFDAP +ATDNGKDSSA AIV+S L+E++ ETG
Sbjct:  110 AEFYCSGLEGLESEEDNDTGFQ---------------ILNSFGLGYRLTGS----DDYLQRVLTGAEALHDFRWDGNIPAYWSWENPTKRPDWDRAVNVDMMMNLEILLWAGLNGGEDHELE-VEGHADSTWKDIVREDNSTNHVAAYDIDTGEFIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETG 338          
BLAST of mRNA_F-distichus_contig9624.19074.1 vs. uniprot
Match: A0A6N6ZAI7_9BACT (Putative unsaturated glucuronyl hydrolase n=1 Tax=Puniceicoccaceae bacterium 5H TaxID=2508868 RepID=A0A6N6ZAI7_9BACT)

HSP 1 Score: 238 bits (606), Expect = 1.060e-71
Identity = 139/296 (46.96%), Postives = 185/296 (62.50%), Query Frame = 1
Query:   61 DNDLGFQARDAGMSMCSCPEGRVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWER-AVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYF---DDNLPSDGVPPADFDAPVNATDNGKDSSATAIVASALVEIYAETGDSKYLAWAEKYLSAVLTADYYLPDATDGYQSILRRATAKWGETERGAVFGDYFVLEAM 936
            DND GFQ               +  +FG    L +     D Y   ++ GAD+L D RW +NI AF +W    S P  E   VN+DM+MNMEI+LWAS +GGNT +A+    HAD +W+D+VRDD STFHV DY+ D G +  + T+QG+  +STW+RGQAWAVYG  M+YRY Q P+ LER+     YF    +    D VP +DFDAP+++ +N +D+SA AIVASA +E+Y  TG+ KYL  AE  L++ LT   YL   TD Y+S+L + + KWGE E GAV GDY+ +EAM
Sbjct:  112 DNDTGFQ---------------IYCAFGTALMLGADVDTSD-YTSVIIQGADTLIDERWNSNIGAFRAWPASDSTPNTEPFEVNIDMMMNMEIILWASQHGGNTAWADAAISHADASWEDLVRDDYSTFHVVDYNLD-GSVDSKRTHQGWKTDSTWSRGQAWAVYGYTMLYRYTQLPRMLERAEHTFDYFMTATEAQVDDYVPYSDFDAPIDS-ENPRDTSAAAIVASAALELYQTTGEQKYLTAAENMLNS-LTQAPYLSIGTD-YESVLAKGSEKWGEPEVGAVTGDYYFIEAM 387          
BLAST of mRNA_F-distichus_contig9624.19074.1 vs. uniprot
Match: A0A6H5JQR3_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQR3_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 1.770e-68
Identity = 130/290 (44.83%), Postives = 173/290 (59.66%), Query Frame = 1
Query:   34 GLEGVEELDDNDLGFQARDAGMSMCSCPEGRVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDDNLPSDGVPPADFDAPVNATDNGKDSSATAIVASALVEIYAETGDSKYLAWAEKYLSAVLTADYYLPD-ATDGYQSILRRATAKWGETERG 900
            GLE VE +DDND+G Q                LNSFG  +RL ++S     Y  R    A +LY+ R+  NIPAFWSW NP + P+WER VNVD+I+N EI+LWA+VNGG   Y+   A                         D G     G YQG+ D+STW+RGQAWA+YG  M++RYL++ +FLE ++  L YF D+LP D VP ADFDAPV++ DN KDSS TAIV SAL+E++   G+  YL  A+++LS++L +  Y    ATDG+Q+ILR +   WG+   G
Sbjct:   11 GLEEVERMDDNDVGLQ---------------TLNSFGQVHRLVNASH----YHARTRAAAQTLYNLRYDENIPAFWSWANPKNEPQWERVVNVDVIINTEIVLWAAVNGGKANYSAAAARAR---------------------ADLG-----GAYQGWQDDSTWSRGQAWAMYGFTMVHRYLKKQRFLEYAINTLSYFIDSLPDDNVPYADFDAPVDS-DNPKDSSVTAIVTSALLELFELIGEPSYLEKAQEFLSSLLLSSTYFDSLATDGWQAILRNSAPAWGDEAVG 254          
BLAST of mRNA_F-distichus_contig9624.19074.1 vs. uniprot
Match: R9PSV9_AGAAL (Putative unsaturated glucuronyl hydrolase n=4 Tax=Agarivorans TaxID=261825 RepID=R9PSV9_AGAAL)

HSP 1 Score: 222 bits (566), Expect = 2.940e-66
Identity = 131/314 (41.72%), Postives = 184/314 (58.60%), Query Frame = 1
Query:    7 QEKAEFFCEGLEGVEELDDNDLGFQARDAGMSMCSCPEGRVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRP-EWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDDNLPS---DGVPPADFDAPVNATDNGKDSSATAIVASALVEIYAETGDSKYLAWAEKYLSAVLTADYYLPDATDGYQSILRRATAKWGETERGAVFGDYFVLEAM 936
            Q+ AE + EG+       DND GFQ               + NSFGLGY +    S  D YK+ ++ GA +L   R+  +I AF SW    S P      VN+D +MNME++LW   +     + +    HAD TW+  VR++ ST+HV  Y P +G++V++ T+QG+   STW+RGQAW+VY   M YRY    + LERS+   +YF ++      D VP +DFDAP++  DN +DSSATAIVASAL+E+Y  T   KYL  A++ L+++ T  Y   D  + YQSIL + + KWGE E G +FGDYF +EA+
Sbjct:  103 QQYAEHWTEGVRSRAYATDNDTGFQ---------------IFNSFGLGYTMGKKPS--DDYKQVLIDGASTLVKQRYNKDIGAFRSWRQGISNPTRLPFEVNIDQLMNMELVLWVGKHANKPEFTKMAISHADKTWEHGVRENGSTYHVVSYSP-SGEVVKKRTHQGWKTESTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIESTKQQTQDLVPYSDFDAPID-DDNPRDSSATAIVASALIELYKITQQEKYLNDAQQMLASLSTPKYLAMD--NNYQSILLKGSEKWGEPEVGTIFGDYFFIEAL 395          
BLAST of mRNA_F-distichus_contig9624.19074.1 vs. uniprot
Match: UPI001F1B9B3F (glycoside hydrolase family 88 protein n=1 Tax=Vibrio hippocampi TaxID=654686 RepID=UPI001F1B9B3F)

HSP 1 Score: 217 bits (553), Expect = 2.560e-64
Identity = 131/317 (41.32%), Postives = 184/317 (58.04%), Query Frame = 1
Query:    7 QEKAEFFCEGLEGVEELDDNDLGFQARDAGMSMCSCPEGRVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSW----ENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYF---DDNLPSDGVPPADFDAPVNATDNGKDSSATAIVASALVEIYAETGDSKYLAWAEKYLSAVLTADYYLPDATDGYQSILRRATAKWGETERGAVFGDYFVLEAM 936
            Q+KAEF+ EG+       DND GFQ               V +SFGLGY +   +S  D YK+ +  GA++L   R+  +I AF SW    +NP++ P     VN+D +MNME++LW   N     Y +    HAD TW+  VRD+ ST+HV  Y+ D G +  + T+QG+  +STW+RGQAW+VY   M YR+    + LERS+    YF        +D VP +DFDAP++   N KD+SATA+VAS L+E+Y  T D KYL  AE  L ++   +Y   +    YQ+IL++ + KWGE E G +FGDYF +EA+
Sbjct:  102 QKKAEFWTEGVRSRAYATDNDTGFQ---------------VFDSFGLGYTIGGVTS--DDYKQVLKDGANTLVTERYNKDIGAFRSWNQRIDNPTTLPF---EVNIDQLMNMELVLWVGANADKPEYTQMAVSHADKTWQHGVRDNGSTYHVVSYNLD-GSVDSKRTHQGWQTDSTWSRGQAWSVYAYAMYYRFTGLERMLERSIKSYDYFLSATQQQTNDLVPYSDFDAPIDVR-NPKDTSATAVVASGLLELYHITKDEKYLNDAEAMLISLAKPEYLARETE--YQAILKKGSEKWGEPEVGTIFGDYFFIEAL 394          
BLAST of mRNA_F-distichus_contig9624.19074.1 vs. uniprot
Match: UPI00200F5605 (glycoside hydrolase family 88 protein n=1 Tax=Agarivorans sp. TSD2052 TaxID=2937286 RepID=UPI00200F5605)

HSP 1 Score: 216 bits (550), Expect = 6.120e-64
Identity = 129/317 (40.69%), Postives = 187/317 (58.99%), Query Frame = 1
Query:    7 QEKAEFFCEGLEGVEELDDNDLGFQARDAGMSMCSCPEGRVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSW----ENPSSRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLERSLACLKYFDDNLP---SDGVPPADFDAPVNATDNGKDSSATAIVASALVEIYAETGDSKYLAWAEKYLSAVLTADYYLPDATDGYQSILRRATAKWGETERGAVFGDYFVLEAM 936
            Q++A+F+ +G+       DND GFQ               + +SFGLGY L  +++    YK+ ++ GA+++ + R+  NI  F SW    +NP+  P     VN+D +MNME++LW   N     Y E    HAD TW+  +R + ST+HV  Y  D G +V++ T+QG+  +STW+RGQAW+VY   M YRY    + LERS+   +YF +       D +P ADFDAP++   N +DSSATAIVASAL+E+Y  T + KYL  AE  L+++ T ++   D    YQSIL + + KWGE E G +FGDYF +EA+
Sbjct:   97 QQRAKFWTDGVRSRAYATDNDTGFQ---------------IFDSFGLGYTLGGNAT--PDYKKVLIGGANTMVEQRYNKNIGTFRSWRQGAKNPTILPF---EVNIDQLMNMELILWVGQNADKPDYTEMAISHADKTWEHNLRKNASTYHVVGYGLD-GKVVDKRTHQGWKADSTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIEATKLQTQDFIPYADFDAPIDDK-NPRDSSATAIVASALLELYKITNEEKYLVDAESMLTSLATPEFLAMDPE--YQSILLKGSEKWGEEEVGTIFGDYFFIEAL 389          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9624.19074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCI0_9PHAE1.590e-12561.94GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FQV4_ECTSI5.680e-12161.49Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
A0A6H5JQV0_9PHAE4.040e-12059.29GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FUJ9_ECTSI3.900e-11758.90Unsaturated glucuronyl hydrolase, family GH88 n=3 ... [more]
D8LHN8_ECTSI6.030e-10662.65Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
A0A6N6ZAI7_9BACT1.060e-7146.96Putative unsaturated glucuronyl hydrolase n=1 Tax=... [more]
A0A6H5JQR3_9PHAE1.770e-6844.83GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
R9PSV9_AGAAL2.940e-6641.72Putative unsaturated glucuronyl hydrolase n=4 Tax=... [more]
UPI001F1B9B3F2.560e-6441.32glycoside hydrolase family 88 protein n=1 Tax=Vibr... [more]
UPI00200F56056.120e-6440.69glycoside hydrolase family 88 protein n=1 Tax=Agar... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9624contigF-distichus_contig9624:8863..11436 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score371.3
Seed ortholog evalue4.4e-100
Seed eggNOG ortholog2880.D7FQV4
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Glycosyl Hydrolase Family 88
EggNOG OGs2CYCX@1,2S3MN@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size939
Cds size939
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931139.3655038-CDS-F-distichus_contig9624:8862..90411622931139.3655038-CDS-F-distichus_contig9624:8862..9041Fucus distichus monoicousCDSF-distichus_contig9624 8863..9041 -
1690886174.8681679-CDS-F-distichus_contig9624:8862..90411690886174.8681679-CDS-F-distichus_contig9624:8862..9041Fucus distichus monoicousCDSF-distichus_contig9624 8863..9041 -
1622931139.3854368-CDS-F-distichus_contig9624:9293..94331622931139.3854368-CDS-F-distichus_contig9624:9293..9433Fucus distichus monoicousCDSF-distichus_contig9624 9294..9433 -
1690886174.8812683-CDS-F-distichus_contig9624:9293..94331690886174.8812683-CDS-F-distichus_contig9624:9293..9433Fucus distichus monoicousCDSF-distichus_contig9624 9294..9433 -
1622931139.4047277-CDS-F-distichus_contig9624:9695..98251622931139.4047277-CDS-F-distichus_contig9624:9695..9825Fucus distichus monoicousCDSF-distichus_contig9624 9696..9825 -
1690886174.8924367-CDS-F-distichus_contig9624:9695..98251690886174.8924367-CDS-F-distichus_contig9624:9695..9825Fucus distichus monoicousCDSF-distichus_contig9624 9696..9825 -
1622931139.423136-CDS-F-distichus_contig9624:10129..102271622931139.423136-CDS-F-distichus_contig9624:10129..10227Fucus distichus monoicousCDSF-distichus_contig9624 10130..10227 -
1690886174.9030275-CDS-F-distichus_contig9624:10129..102271690886174.9030275-CDS-F-distichus_contig9624:10129..10227Fucus distichus monoicousCDSF-distichus_contig9624 10130..10227 -
1622931139.4373558-CDS-F-distichus_contig9624:10487..106391622931139.4373558-CDS-F-distichus_contig9624:10487..10639Fucus distichus monoicousCDSF-distichus_contig9624 10488..10639 -
1690886174.9133358-CDS-F-distichus_contig9624:10487..106391690886174.9133358-CDS-F-distichus_contig9624:10487..10639Fucus distichus monoicousCDSF-distichus_contig9624 10488..10639 -
1622931139.4545877-CDS-F-distichus_contig9624:11046..111601622931139.4545877-CDS-F-distichus_contig9624:11046..11160Fucus distichus monoicousCDSF-distichus_contig9624 11047..11160 -
1690886174.9271078-CDS-F-distichus_contig9624:11046..111601690886174.9271078-CDS-F-distichus_contig9624:11046..11160Fucus distichus monoicousCDSF-distichus_contig9624 11047..11160 -
1622931139.4787736-CDS-F-distichus_contig9624:11310..114361622931139.4787736-CDS-F-distichus_contig9624:11310..11436Fucus distichus monoicousCDSF-distichus_contig9624 11311..11436 -
1690886174.9434524-CDS-F-distichus_contig9624:11310..114361690886174.9434524-CDS-F-distichus_contig9624:11310..11436Fucus distichus monoicousCDSF-distichus_contig9624 11311..11436 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9624.19074.1prot_F-distichus_contig9624.19074.1Fucus distichus monoicouspolypeptideF-distichus_contig9624 8863..11436 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig9624.19074.1

>prot_F-distichus_contig9624.19074.1 ID=prot_F-distichus_contig9624.19074.1|Name=mRNA_F-distichus_contig9624.19074.1|organism=Fucus distichus monoicous|type=polypeptide|length=313bp
MPQEKAEFFCEGLEGVEELDDNDLGFQARDAGMSMCSCPEGRVLNSFGLG
YRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWER
AVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDNSTFHV
ADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLE
RSLACLKYFDDNLPSDGVPPADFDAPVNATDNGKDSSATAIVASALVEIY
AETGDSKYLAWAEKYLSAVLTADYYLPDATDGYQSILRRATAKWGETERG
AVFGDYFVLEAMV
back to top

mRNA from alignment at F-distichus_contig9624:8863..11436-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig9624.19074.1 ID=mRNA_F-distichus_contig9624.19074.1|Name=mRNA_F-distichus_contig9624.19074.1|organism=Fucus distichus monoicous|type=mRNA|length=2574bp|location=Sequence derived from alignment at F-distichus_contig9624:8863..11436- (Fucus distichus monoicous)
ATGCCACAGGAGAAAGCCGAATTCTTCTGTGAAGGCCTTGAAGGCGTGGA GGAGTTGGATGACAACGATCTTGGTTTCCAGGCGAGAGATGCGGGCATGT CCATGTGTTCGTGTCCTGAGGGGCGCGTTGTCTGCGAACTGCTATTATAT ATTTCTAGAATTATTTTGCGTCTCGTGCATTTACAATGCCTTCCAATGCA TCTCATGCACTCATCATCTACTTGGTGTGACACTCGCGTAACGGAGAAGC ATTGCATGCACCGCTGGCATTTGCAGGTACTCAACTCCTTCGGTCTTGGT TACAGGCTCTCGTCGTCCAGCTCTCTCCGTGATGCTTACAAGGAGAGGGT GCTGACGGGCGCTGATTCGCTCTACGACTTTAGGTGGACGGTAAGAACCT CTGTATACTGTATGGTACCAAGTGTCACCTGGGTCTGTTAAATACCTGTG CCGCCGCCTCCTTACGAATCTCGCAGTAGCCGTACACATTTGACATGGGG CGTAACCGATGGGCAGTGTACCAAACTAGTCCGTTGCCATCCCCGGGCTC GTGTAGATATTCTTGGCGAAACAATACATGGCAATCCTTTCTCGCCCAAC CCCACTGCGTGCGCTACCTTCGCTAGCCACCTTTAATAAACGGGGGCTGC TGTCGTTCGCTTAGCTTAGCTGTCGGGCCTTGTCGGAAGAAAAACACATG GCGGTGGAAAAGCGTTCACACATTTTGAGTCGTGGATGGTCCGGACGTTT TCACTACTGAAGCATTTCTGCTACGACCCACTGGCGCTGAAAAACAGGCC AACATCCCCGCCTTCTGGTCGTGGGAAAACCCTTCGTCGAGGCCAGAGTG GGAGCGTGCCGTCAACGTCGACATGATCATGAACATGGAGATCATGCTGT GGGCCAGTGTCAATGGAGGAAACACGACCTACGCGGAGAACGTCGCTGAG TGAGTATTCATAGTATAAGCAGAGACTTTGATTTTCACTATGCAGCTCTC TTCACCCGGTGACGCATCTACTCGTCTTACAGACCTGTCACTACTCGACC CAGGCTGCCCTCGAGGATCGAAGAACGTTCATGGTCGTACCCTCTAGCAC CTCTTACCGTCGAATCTCACTCTCGCGAACTTGTTTATTCTTTTTCTACG CTGACACTCCTCAAATTAAAATGCGAAACGTGATCCTGCATCGACGACGA CCCTTCCAGCCACGCCGACACCACGTGGAAAGACATCGTCCGTGACGACA ACAGCACGTTCCACGTAGCGGACTATGACCCCGATACCGGAGATCTTGTG GAACAAGGTACGTAGGGTAAATGTTCACTCGCGCGTACTAAGAAAGCGAT TTCAATCACATTGAGCCTCACTCTTAACGAGTTTTTGTTTCCCGTGAGCC TCGTCGGTTTGGTGTGAAACCCGAACGCAACACCGCCGGCCAACATTGCA AGCGCCGAAACTTATTTTTGCCCAGAAACATGAGAACGAAGAATCGTTGA ACCGGCATCGAAGTATGATTTCGACGTGGTCGACTCGCCGGCATAAGAGG TGCAGCACGGATTTGTTCCTTTATACTTGGAAAAAGGTTGTGCGTGCATT GCTCCCTATAGGGACGTACCAAGGTTACGCCGACAACTCTACCTGGACAA GGGGGCAGGCCTGGGCCGTTTACGGAAACGTGATGATCTACCGCTACCTA CAGGAGCCCAAGTTCCTCGAGCGATCGCTGGCCTGTCTCAAGTGAGATCT GGTGTGAGGTTCAGAAGTACCACAATGTGTTGCGAGCGATTTCCCCTCCA CATCGCCCGTGTCTACGCTCCACGGAAAACTCGCACCGGATAGAAGCTTC ACGCTGAACGCGACAGGGCTGGGAAAATTTGTTGGCAACACTATTGATAT ACGCCGTCTGCTCCTCCTGTTAATACTTCGTACCGAGTCAAGCTTTTTAC TGAGAACGTCCTTTGTCGTTCGGCCCGCTACCCCCCGCCGGGCTCGACTG CAGGTACTTCGACGACAATCTGCCGAGCGATGGAGTCCCTCCAGCGGACT TCGATGCCCCGGTTAATGCCACAGACAACGGGAAGGACAGCTCGGCCACG GCCATTGTCGCTTCCGCCCTCGTCGAGATATATGCCGAAACCGGTGCGTC GTAACATTTGGAACTTCGAGTCACGCTGCATCACGAACCGCCAAACGGTG TTGGTCTGATACATAGCGTGGCATCTTGCCTTCTTACTGGATGAAAACAT ATTATGTAAAATCATTAAATGTGGTTCAAGTTTATTCGTTTTTATTTTCA TCGCTGTTGTCATCTCGTATCACGGTTAATAAGTTAAACTGTTGACGGTC ACTCTGCCGTTTGCTGCCTTCTCCGACAAATCTACGCGCGGTCAGGGGAC TCGAAGTACCTGGCCTGGGCGGAAAAATACCTGTCTGCGGTTCTTACCGC CGACTACTACTTGCCTGACGCCACCGATGGATACCAGTCCATCTTGCGCC GAGCGACGGCAAAGTGGGGCGAGACGGAGAGGGGCGCCGTTTTTGGTGAC TACTTTGTGCTCGAGGCCATGGTA
back to top

Coding sequence (CDS) from alignment at F-distichus_contig9624:8863..11436-

>mRNA_F-distichus_contig9624.19074.1 ID=mRNA_F-distichus_contig9624.19074.1|Name=mRNA_F-distichus_contig9624.19074.1|organism=Fucus distichus monoicous|type=CDS|length=1878bp|location=Sequence derived from alignment at F-distichus_contig9624:8863..11436- (Fucus distichus monoicous)
ATGCCACAGGAGAAAGCCGAATTCTTCTGTGAAGGCCTTGAAGGCGTGGA
GGAGTTGGATGACAACGATCTTGGTTTCCAGGCGAGAGATGCGGGCATGT
CCATGTGTTCGTGTCCTGAGGGGCGCATGCCACAGGAGAAAGCCGAATTC
TTCTGTGAAGGCCTTGAAGGCGTGGAGGAGTTGGATGACAACGATCTTGG
TTTCCAGGCGAGAGATGCGGGCATGTCCATGTGTTCGTGTCCTGAGGGGC
GCGTACTCAACTCCTTCGGTCTTGGTTACAGGCTCTCGTCGTCCAGCTCT
CTCCGTGATGCTTACAAGGAGAGGGTGCTGACGGGCGCTGATTCGCTCTA
CGACTTTAGGTGGACGGTACTCAACTCCTTCGGTCTTGGTTACAGGCTCT
CGTCGTCCAGCTCTCTCCGTGATGCTTACAAGGAGAGGGTGCTGACGGGC
GCTGATTCGCTCTACGACTTTAGGTGGACGGCCAACATCCCCGCCTTCTG
GTCGTGGGAAAACCCTTCGTCGAGGCCAGAGTGGGAGCGTGCCGTCAACG
TCGACATGATCATGAACATGGAGATCATGCTGTGGGCCAGTGTCAATGGA
GGAAACACGACCTACGCGGAGAACGTCGCTGAGCCAACATCCCCGCCTTC
TGGTCGTGGGAAAACCCTTCGTCGAGGCCAGAGTGGGAGCGTGCCGTCAA
CGTCGACATGATCATGAACATGGAGATCATGCTGTGGGCCAGTGTCAATG
GAGGAAACACGACCTACGCGGAGAACGTCGCTGACCACGCCGACACCACG
TGGAAAGACATCGTCCGTGACGACAACAGCACGTTCCACGTAGCGGACTA
TGACCCCGATACCGGAGATCTTGTGGAACAAGCCACGCCGACACCACGTG
GAAAGACATCGTCCGTGACGACAACAGCACGTTCCACGTAGCGGACTATG
ACCCCGATACCGGAGATCTTGTGGAACAAGGGACGTACCAAGGTTACGCC
GACAACTCTACCTGGACAAGGGGGCAGGCCTGGGCCGTTTACGGAAACGT
GATGATCTACCGCTACCTACAGGAGCCCAAGTTCCTCGAGCGATCGCTGG
CCTGTCTCAAGGACGTACCAAGGTTACGCCGACAACTCTACCTGGACAAG
GGGGCAGGCCTGGGCCGTTTACGGAAACGTGATGATCTACCGCTACCTAC
AGGAGCCCAAGTTCCTCGAGCGATCGCTGGCCTGTCTCAAGTACTTCGAC
GACAATCTGCCGAGCGATGGAGTCCCTCCAGCGGACTTCGATGCCCCGGT
TAATGCCACAGACAACGGGAAGGACAGCTCGGCCACGGCCATTGTCGCTT
CCGCCCTCGTCGAGATATATGCCGAAACCGGTACTTCGACGACAATCTGC
CGAGCGATGGAGTCCCTCCAGCGGACTTCGATGCCCCGGTTAATGCCACA
GACAACGGGAAGGACAGCTCGGCCACGGCCATTGTCGCTTCCGCCCTCGT
CGAGATATATGCCGAAACCGGGGACTCGAAGTACCTGGCCTGGGCGGAAA
AATACCTGTCTGCGGTTCTTACCGCCGACTACTACTTGCCTGACGCCACC
GATGGATACCAGTCCATCTTGCGCCGAGCGACGGCAAAGTGGGGCGAGAC
GGAGAGGGGCGCCGTTTTTGGTGACTACTTTGTGCTCGAGGCCATGGTAG
GGACTCGAAGTACCTGGCCTGGGCGGAAAAATACCTGTCTGCGGTTCTTA
CCGCCGACTACTACTTGCCTGACGCCACCGATGGATACCAGTCCATCTTG
CGCCGAGCGACGGCAAAGTGGGGCGAGACGGAGAGGGGCGCCGTTTTTGG
TGACTACTTTGTGCTCGAGGCCATGGTA
back to top