mRNA_F-distichus_contig96024.19056.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig96024.19056.1
Unique NamemRNA_F-distichus_contig96024.19056.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
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BLAST of mRNA_F-distichus_contig96024.19056.1 vs. uniprot
Match: A0A6H5KA72_9PHAE (Glyco_transf_24 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA72_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 3.720e-20
Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 1 
Query:    1 QVPIFSLPQEWLWCETWCSDASKADAKTIDLCNNPQ 108
            QVPIFSLPQEWLWCE+WCSD SKA+AKTIDLCNNPQ
Sbjct:    9 QVPIFSLPQEWLWCESWCSDGSKAEAKTIDLCNNPQ 44
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BLAST of mRNA_F-distichus_contig96024.19056.1 vs. uniprot
Match: D7G653_ECTSI (UDP-glucose:glycoprotein glucosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G653_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 5.500e-19
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 1 
Query:    1 QVPIFSLPQEWLWCETWCSDASKADAKTIDLCNNPQ 108
            +VPIFSLPQEWLWCE+WCSD SKA+AKTIDLCNNPQ
Sbjct:   14 KVPIFSLPQEWLWCESWCSDGSKAEAKTIDLCNNPQ 49
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BLAST of mRNA_F-distichus_contig96024.19056.1 vs. uniprot
Match: A0A397FQB5_9STRA (Glyco_transf_24 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FQB5_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.270e-18
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 1 
Query:    1 QVPIFSLPQEWLWCETWCSDASKADAKTIDLCNNPQ 108
            Q+PIFSLPQEWLWCE+WCSD SKA+AKTIDLCNNP+
Sbjct:   64 QIPIFSLPQEWLWCESWCSDESKAEAKTIDLCNNPK 99
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BLAST of mRNA_F-distichus_contig96024.19056.1 vs. uniprot
Match: A0A7S1D9U4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9U4_CYCTE)

HSP 1 Score: 78.6 bits (192), Expect = 4.750e-18
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    1 QVPIFSLPQEWLWCETWCSDASKADAKTIDLCNNP 105
            QVPIFSLPQEWLWCE+WCSD SKA AKTIDLCNNP
Sbjct:   23 QVPIFSLPQEWLWCESWCSDESKAAAKTIDLCNNP 57
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BLAST of mRNA_F-distichus_contig96024.19056.1 vs. uniprot
Match: A0A672R9H0_SINGR (Glyco_transf_24 domain-containing protein n=2 Tax=Cyprininae TaxID=2743694 RepID=A0A672R9H0_SINGR)

HSP 1 Score: 77.4 bits (189), Expect = 8.890e-18
Identity = 32/36 (88.89%), Postives = 32/36 (88.89%), Query Frame = 1 
Query:    1 QVPIFSLPQEWLWCETWCSDASKADAKTIDLCNNPQ 108
            QVPI SLPQEWLWCETWC DASK  AKTIDLCNNPQ
Sbjct:    4 QVPIKSLPQEWLWCETWCDDASKQKAKTIDLCNNPQ 39
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BLAST of mRNA_F-distichus_contig96024.19056.1 vs. uniprot
Match: A0A485KRL7_9STRA (Aste57867_10708 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRL7_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.670e-17
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 1 
Query:    1 QVPIFSLPQEWLWCETWCSDASKADAKTIDLCNNPQ 108
            Q+PIFSLPQEWLWCE+WCSD SKA AKTIDLCNNP+
Sbjct:   88 QIPIFSLPQEWLWCESWCSDDSKAQAKTIDLCNNPK 123
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BLAST of mRNA_F-distichus_contig96024.19056.1 vs. uniprot
Match: A0A8C5R9B1_LATLA (Glyco_transf_24 domain-containing protein n=1 Tax=Laticauda laticaudata TaxID=8630 RepID=A0A8C5R9B1_LATLA)

HSP 1 Score: 75.5 bits (184), Expect = 4.510e-17
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 1 
Query:    1 QVPIFSLPQEWLWCETWCSDASKADAKTIDLCNNPQ 108
            QVPI SLPQEWLWCETWCS+ SKA AKTIDLCNNP+
Sbjct:    4 QVPIKSLPQEWLWCETWCSNESKAKAKTIDLCNNPK 39
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BLAST of mRNA_F-distichus_contig96024.19056.1 vs. uniprot
Match: B7G4N6_PHATC (UDP-glucose:glycoprotein glucosyltransferase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4N6_PHATC)

HSP 1 Score: 77.0 bits (188), Expect = 9.640e-17
Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 1 
Query:    1 QVPIFSLPQEWLWCETWCSDASKADAKTIDLCNNPQ 108
            QVPIFSLPQEWLWCE+WCSD +K  AKTIDLCNNP+
Sbjct:   90 QVPIFSLPQEWLWCESWCSDETKGTAKTIDLCNNPE 125
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BLAST of mRNA_F-distichus_contig96024.19056.1 vs. uniprot
Match: A0A7S3MEZ4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEZ4_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.000e-16
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    1 QVPIFSLPQEWLWCETWCSDASKADAKTIDLCNNP 105
            QVPIFSLPQEWLWCE+WCSD SK+ AKTIDLCNNP
Sbjct:  112 QVPIFSLPQEWLWCESWCSDDSKSTAKTIDLCNNP 146
[Close]
BLAST of mRNA_F-distichus_contig96024.19056.1 vs. uniprot
Match: A0A1Y1MK52_PHOPY (Glyco_transf_24 domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MK52_PHOPY)

HSP 1 Score: 75.5 bits (184), Expect = 1.120e-16
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 1 
Query:    1 QVPIFSLPQEWLWCETWCSDASKADAKTIDLCNNPQ 108
            Q+PI SLPQEWLWCETWCSD S A A+TIDLCNNPQ
Sbjct:   19 QIPIHSLPQEWLWCETWCSDESLAKARTIDLCNNPQ 54
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96024.19056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KA72_9PHAE3.720e-2091.67Glyco_transf_24 domain-containing protein n=1 Tax=... [more]
D7G653_ECTSI5.500e-1988.89UDP-glucose:glycoprotein glucosyltransferase n=1 T... [more]
A0A397FQB5_9STRA3.270e-1886.11Glyco_transf_24 domain-containing protein n=2 Tax=... [more]
A0A7S1D9U4_CYCTE4.750e-1891.43Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A672R9H0_SINGR8.890e-1888.89Glyco_transf_24 domain-containing protein n=2 Tax=... [more]
A0A485KRL7_9STRA1.670e-1786.11Aste57867_10708 protein n=2 Tax=Aphanomyces stella... [more]
A0A8C5R9B1_LATLA4.510e-1786.11Glyco_transf_24 domain-containing protein n=1 Tax=... [more]
B7G4N6_PHATC9.640e-1783.33UDP-glucose:glycoprotein glucosyltransferase n=2 T... [more]
A0A7S3MEZ4_9STRA1.000e-1688.57Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A1Y1MK52_PHOPY1.120e-1683.33Glyco_transf_24 domain-containing protein (Fragmen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig96024contigF-distichus_contig96024:1542..1649 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score76.3
Seed ortholog evalue3.4e-12
Seed eggNOG ortholog1173701.A0A066XGG3
Preferred nameKRE5
KEGG koko:K11718
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000271,GO:0003674,GO:0003824,GO:0003980,GO:0005488,GO:0005509,GO:0005515,GO:0005537,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005975,GO:0005976,GO:0006011,GO:0006073,GO:0006139,GO:0006457,GO:0006458,GO:0006464,GO:0006486,GO:0006487,GO:0006491,GO:0006508,GO:0006515,GO:0006725,GO:0006793,GO:0006807,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008194,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009250,GO:0009272,GO:0009987,GO:0010033,GO:0010243,GO:0010383,GO:0010498,GO:0012505,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0023052,GO:0030163,GO:0030246,GO:0030968,GO:0031974,GO:0033554,GO:0033692,GO:0034406,GO:0034620,GO:0034637,GO:0034641,GO:0034645,GO:0034976,GO:0035251,GO:0035966,GO:0035967,GO:0036094,GO:0036211,GO:0036503,GO:0042221,GO:0042546,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0044036,GO:0044038,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044262,GO:0044264,GO:0044265,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046527,GO:0046872,GO:0048029,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051273,GO:0051274,GO:0051278,GO:0051603,GO:0051716,GO:0051787,GO:0051788,GO:0055086,GO:0065007,GO:0070013,GO:0070085,GO:0070589,GO:0070592,GO:0070879,GO:0070880,GO:0070887,GO:0071218,GO:0071310,GO:0071554,GO:0071704,GO:0071712,GO:0071840,GO:0071852,GO:0071966,GO:0097359,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698
EggNOG free text desc.UDP-glucose glycoprotein glucosyltransferase
EggNOG OGs1EV36@1028384,212MA@147550,38FK5@33154,3NVVK@4751,3QK0R@4890,KOG1879@1,KOG1879@2759
COG Functional cat.G
CAZyGT24
Best tax levelGlomerellales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Exons1
Model size108
Cds size108
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931137.4298937-CDS-F-distichus_contig96024:1541..16491622931137.4298937-CDS-F-distichus_contig96024:1541..1649Fucus distichus monoicousCDSF-distichus_contig96024 1542..1649 -
1690886174.057644-CDS-F-distichus_contig96024:1541..16491690886174.057644-CDS-F-distichus_contig96024:1541..1649Fucus distichus monoicousCDSF-distichus_contig96024 1542..1649 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig96024.19056.1prot_F-distichus_contig96024.19056.1Fucus distichus monoicouspolypeptideF-distichus_contig96024 1542..1649 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig96024.19056.1

>prot_F-distichus_contig96024.19056.1 ID=prot_F-distichus_contig96024.19056.1|Name=mRNA_F-distichus_contig96024.19056.1|organism=Fucus distichus monoicous|type=polypeptide|length=36bp
QVPIFSLPQEWLWCETWCSDASKADAKTIDLCNNPQ
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mRNA from alignment at F-distichus_contig96024:1542..1649-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig96024.19056.1 ID=mRNA_F-distichus_contig96024.19056.1|Name=mRNA_F-distichus_contig96024.19056.1|organism=Fucus distichus monoicous|type=mRNA|length=108bp|location=Sequence derived from alignment at F-distichus_contig96024:1542..1649- (Fucus distichus monoicous)
CAGGTGCCCATCTTCTCCCTGCCCCAGGAGTGGCTGTGGTGCGAGACATG
GTGCAGCGATGCCAGCAAGGCGGACGCCAAGACGATTGACCTGTGCAACA
ACCCCCAG
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Coding sequence (CDS) from alignment at F-distichus_contig96024:1542..1649-

>mRNA_F-distichus_contig96024.19056.1 ID=mRNA_F-distichus_contig96024.19056.1|Name=mRNA_F-distichus_contig96024.19056.1|organism=Fucus distichus monoicous|type=CDS|length=216bp|location=Sequence derived from alignment at F-distichus_contig96024:1542..1649- (Fucus distichus monoicous)
CAGGTGCCCATCTTCTCCCTGCCCCAGGAGTGGCTGTGGTGCGAGACATG
GTGCAGCGATGCCAGCAAGGCGGACGCCAAGACGATTGACCTGTGCAACA
ACCCCCAGCAGGTGCCCATCTTCTCCCTGCCCCAGGAGTGGCTGTGGTGC
GAGACATGGTGCAGCGATGCCAGCAAGGCGGACGCCAAGACGATTGACCT
GTGCAACAACCCCCAG
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