mRNA_F-distichus_contig10778.663.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10778.663.1 vs. uniprot
Match: A0A6H5KMN3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN3_9PHAE) HSP 1 Score: 229 bits (585), Expect = 1.120e-67 Identity = 150/264 (56.82%), Postives = 171/264 (64.77%), Query Frame = 1
Query: 1 ARMVTDSGPAAKDGSGSPVLPRVGKRGAPQAFARKLYEILTTESQELIAWNADGTAFHVKDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHRMFHRDRPDDLYHVRRSISGSGKYEPSAS--KTTAGAAVRRNAGRSASKASSGTEWLP-GRAHKSSGATRRVGKIR--SSP-GSAAGAGSATPSSPACSNRADR--------------GNVVATPSPSSAAATLAAATADVSAGERSPWTSGESSDSDV 732
A M T S P+A G G R+GKRGAPQAFARKL EIL TES I+WNA+G+AF V DV+ FS + LTKYYRHSKFSSFQRQLNLYSFRKIVKG DAGGYAH MF RDRPDDLYHVRRSISGS +YEP+A+ K TA + ++G +W P R HKS A RRVGK+R SSP GS +G PSS + AD G+ V P S+A T AA++ AGERSPWTSGESSDSD
Sbjct: 12 AEMATSSSPSATAGDGQRERGRIGKRGAPQAFARKLAEILATESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGSARYEPAAAAAKATAKXXXXXXXXXXLKQQATGGQWSPPARVHKSGAAARRVGKLRNKSSPAGSNGSSGGDKPSSYSARLVADHHMAGAATXXXXXXXGSGVGVGIPPSSADTRAASS---DAGERSPWTSGESSDSDA 272
BLAST of mRNA_F-distichus_contig10778.663.1 vs. uniprot
Match: D8LDA5_ECTSI (Putative Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDA5_ECTSI) HSP 1 Score: 188 bits (477), Expect = 4.200e-52 Identity = 129/256 (50.39%), Postives = 145/256 (56.64%), Query Frame = 1
Query: 88 QAFARKLYEILTTESQELIAWNADGTAFHVKDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHRMFHRDRPDDLYHVRRSISGSGKYEPSASKTTAGAAVRRNAGRSASKASSGT--------EWLP-GRAHKSSGATRRVGKIRSSPGSAAGAGSATPSSPACSNRADRGNVVATPSPSSAAATLAA---------------------------ATADVSAG-----ERSPWTSGESSDSDV 732
+AFARKL EILTTES I+WNA+G+AF V DV+ FS + LTKYYRHSKFSSFQRQLNLYSFRKIVKG DAGGYAH MF RDRPDDLYHVRRSISGS +YEP+A+ EW P R HKS A RRVGK+R+ SSPA SN + RG PSS +A L A ++AD +AG ERSPWTSGESSDSD
Sbjct: 12 EAFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGSARYEPAAAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXRGEWSPPARVHKSGAAARRVGKLRNK------------SSPAGSNSSSRGG----DKPSSYSARLVADHQRAGVATAXXXXXXXXXXXXVXXPASSADAAAGSSDAGERSPWTSGESSDSDA 251
BLAST of mRNA_F-distichus_contig10778.663.1 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK) HSP 1 Score: 145 bits (366), Expect = 1.220e-37 Identity = 71/111 (63.96%), Postives = 83/111 (74.77%), Query Frame = 1
Query: 61 PRVGKRGAPQAFARKLYEILTTESQELIAWNADGTAFHVKDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHRMFHRDRPDDLYHVRRSISGSGKYEP 393
PR G+RGAPQAFARKLYEIL E +L++WNA G AF V+D+D FS E L KY+RHSKF+SFQRQLNLY FRKI +G DAG YAH+ F + +PD L VRRS S S P
Sbjct: 4 PRTGQRGAPQAFARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHSKFASFQRQLNLYGFRKITRGSDAGSYAHQYFRKGKPDLLSLVRRSQSSSSPSPP 114
BLAST of mRNA_F-distichus_contig10778.663.1 vs. uniprot
Match: A0A6V2VRS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2VRS5_HETAK) HSP 1 Score: 137 bits (346), Expect = 7.450e-35 Identity = 73/143 (51.05%), Postives = 94/143 (65.73%), Query Frame = 1
Query: 58 LPRVGKRGAPQAFARKLYEILTTESQELIAWNADGTAFHVKDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHRMFHRDRPDDLYHVRRSISGSGKYEPSASKTTAGAAVRRNAGRSASKA---SSGTEW 477
PR G RGAPQ FARKLY+IL TES+++I WN GTAF +KD+D FS E L KY+RH+ +SSFQRQ+NLY F+KI +GP AG H+ F R RPD L V+R S + S S + + R+ A R +SK+ +S T W
Sbjct: 10 FPRTGSRGAPQVFARKLYQILLTESKDVICWNEPGTAFFIKDMDRFSQEVLMKYFRHNNYSSFQRQMNLYGFKKISRGPFAGANMHQQFLRGRPDLLVMVKRKPRSSSPFPSSRSVSPVPPSSRKAASRKSSKSPKSASPTPW 152
BLAST of mRNA_F-distichus_contig10778.663.1 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA) HSP 1 Score: 129 bits (324), Expect = 2.530e-34 Identity = 59/109 (54.13%), Postives = 77/109 (70.64%), Query Frame = 1
Query: 61 PRVGKRGAPQAFARKLYEILTTESQELIAWNADGTAFHVKDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHRMFHRDRPDDLYHVRRSISGSGKY 387
PR G+RGAPQ F RKLYEIL+TE +++I W G +F +K++++F L KY+RH K+SSFQRQLNLY FRK+ KG D G YAH F RD+P+ L VRR +G +
Sbjct: 4 PRTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTDVGSYAHECFIRDQPELLTKVRRIPQSAGAF 112
BLAST of mRNA_F-distichus_contig10778.663.1 vs. uniprot
Match: A0A7S2WKC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKC6_9STRA) HSP 1 Score: 131 bits (330), Expect = 6.660e-33 Identity = 65/102 (63.73%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 61 PRVGKRGAPQAFARKLYEILTTESQELIAWNADGTAFHVKDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHRMFHRDRPDDLYHVRRS 366
PR GKRGAPQAFA KLYEIL ES E+IAW+ G AF +KD+D F + L KY+RH K+SSFQRQLNLY FRK KG D GGY H F R R D L VRR+
Sbjct: 74 PRTGKRGAPQAFAHKLYEILEAESTEVIAWSGTGRAFFIKDMDIFVSQVLLKYFRHVKYSSFQRQLNLYGFRKATKGQDVGGYYHHYFMRSRRDLLPFVRRT 175
BLAST of mRNA_F-distichus_contig10778.663.1 vs. uniprot
Match: A0A7S2CXJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CXJ7_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.310e-32 Identity = 63/110 (57.27%), Postives = 78/110 (70.91%), Query Frame = 1
Query: 61 PRVGKRGAPQAFARKLYEILTTESQELIAWNADGTAFHVKDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHRMFHRDRPDDLYHVRRSISGSGKYE 390
PR G+RGAPQ F RKLYEILT ES ++I+W +GT+F ++++D F E L KY+RH K+SSFQRQLNLY FRKI KGPD G YAH F RD L VRR +G+ +
Sbjct: 74 PRTGRRGAPQVFPRKLYEILTLESSDIISWTENGTSFVIQEMDDFVNEILMKYFRHRKYSSFQRQLNLYGFRKIQKGPDTGAYAHEGFLRDDESQLVKVRRWAQSAGRQQ 183
BLAST of mRNA_F-distichus_contig10778.663.1 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.970e-32 Identity = 59/101 (58.42%), Postives = 72/101 (71.29%), Query Frame = 1
Query: 61 PRVGKRGAPQAFARKLYEILTTESQELIAWNADGTAFHVKDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHRMFHRDRPDDLYHVRR 363
PR G+RGAPQ F RKLYEILT E ++I W + G +F + +++ F E L Y+RH K+SSFQRQLNLY FRKI KGPD G YAH F RD+P+ L VRR
Sbjct: 96 PRTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKGPDTGAYAHEHFLRDQPESLTFVRR 196
BLAST of mRNA_F-distichus_contig10778.663.1 vs. uniprot
Match: A0A7S2WU52_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU52_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.370e-31 Identity = 64/111 (57.66%), Postives = 76/111 (68.47%), Query Frame = 1
Query: 61 PRVGKRGAPQAFARKLYEILTTESQELIAWNADGTAFHVKDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHRMFHRDRPDDLYHVRRSISGSGKYEP 393
PR GKRGAPQ FARKLYEIL E + I+W GT+F +K++D+F L KY+RH K+SSFQRQLNLY FRKI KG DAG YAH F R +P+ L+ VRR S P
Sbjct: 158 PRTGKRGAPQVFARKLYEILDNEPPDAISWTTSGTSFVIKEMDAFVTCVLMKYFRHQKYSSFQRQLNLYGFRKISKGSDAGAYAHESFIRGQPELLHFVRRMPQSSSSPVP 268
BLAST of mRNA_F-distichus_contig10778.663.1 vs. uniprot
Match: A0A7S2R5C8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C8_9STRA) HSP 1 Score: 129 bits (323), Expect = 4.400e-31 Identity = 62/117 (52.99%), Postives = 78/117 (66.67%), Query Frame = 1
Query: 61 PRVGKRGAPQAFARKLYEILTTESQELIAWNADGTAFHVKDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHRMFHRDRPDDLYHVRRSISGSGKYEPSASKTT 411
PR GKRGAPQ F RKLYEIL ES++ I+W G +F +KD+++F L KY+RH KFSSFQRQLNLY FRKI KG + G Y H F RD+ D L VRR+ +G+ + + T
Sbjct: 66 PRTGKRGAPQVFPRKLYEILDNESEDTISWTESGHSFVIKDMETFVTSVLMKYFRHQKFSSFQRQLNLYGFRKISKGTETGAYCHEFFARDQTDKLRLVRRTPQVTGRSKAKTEEAT 182 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10778.663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10778.663.1 >prot_F-distichus_contig10778.663.1 ID=prot_F-distichus_contig10778.663.1|Name=mRNA_F-distichus_contig10778.663.1|organism=Fucus distichus monoicous|type=polypeptide|length=243bp MVTDSGPAAKDGSGSPVLPRVGKRGAPQAFARKLYEILTTESQELIAWNAback to top mRNA from alignment at F-distichus_contig10778:9774..10508+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10778.663.1 ID=mRNA_F-distichus_contig10778.663.1|Name=mRNA_F-distichus_contig10778.663.1|organism=Fucus distichus monoicous|type=mRNA|length=735bp|location=Sequence derived from alignment at F-distichus_contig10778:9774..10508+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10778:9774..10508+ >mRNA_F-distichus_contig10778.663.1 ID=mRNA_F-distichus_contig10778.663.1|Name=mRNA_F-distichus_contig10778.663.1|organism=Fucus distichus monoicous|type=CDS|length=1458bp|location=Sequence derived from alignment at F-distichus_contig10778:9774..10508+ (Fucus distichus monoicous)back to top |