mRNA_F-distichus_contig107777.660.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig107777.660.1 vs. uniprot
Match: D8LFH4_ECTSI (Short-chain dehydrogenase/reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFH4_ECTSI) HSP 1 Score: 132 bits (333), Expect = 2.810e-35 Identity = 64/86 (74.42%), Postives = 74/86 (86.05%), Query Frame = 1
Query: 1 RAGAALAAAPSIMVKTGKVQVVAELAKEYGFDDLGGNRPPSIRSLRFLLPTYLFPKVLPEGVEVAASFVPDWLLPMDVMRNGRPPS 258
RA AALAA P I+ KTGKVQ+VAELAK+YGF D+GG+ PPSIRSLRFLLPTYLFPK+LPEG ++ S VPDWLLPM +M NG+PPS
Sbjct: 327 RAVAALAADPEILKKTGKVQIVAELAKQYGFTDVGGDTPPSIRSLRFLLPTYLFPKILPEGTKIDTSSVPDWLLPMFIMANGKPPS 412
BLAST of mRNA_F-distichus_contig107777.660.1 vs. uniprot
Match: A0A7S2GC83_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GC83_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 8.290e-20 Identity = 49/85 (57.65%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 16 LAAAPSIMV-KTGKVQVVAELAKEYGFDDLGGNRPPSIRSLRFLLPTYLFPKVLPEGVEVAASF---VPDWLLPMDVMRNGRPPS 258
LA +P+IM ++G VQVVAELAKE GF D GN PPSIRSLRFLLP Y+FP + E V + VPD+LLP V G PPS
Sbjct: 31 LATSPTIMEPRSGSVQVVAELAKELGFTDENGNSPPSIRSLRFLLPNYVFPSIEKESGPVPSWIKDNVPDYLLPWSVFSGGPPPS 115
BLAST of mRNA_F-distichus_contig107777.660.1 vs. uniprot
Match: A0A6U5IRZ3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5IRZ3_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 9.310e-18 Identity = 45/85 (52.94%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 1 RAGAALAAAPSIMVKTGKVQVVAELAKEYGFDDLGGNRPPSIRSLRFLLPTYLFPKVLPEGVEVAASFVPDWLLPMDVMRNGRPP 255
RA A+A P+ M K+G QVVAELA EYGF D+ G +PPSIRSL+FLLP+Y F + + ++ +PDW LP VM GRPP
Sbjct: 244 RAVVAVATDPNNMEKSGTFQVVAELADEYGFTDVDGKKPPSIRSLKFLLPSYAFDEETRK--KIPDWMIPDWKLPFSVMAQGRPP 326
BLAST of mRNA_F-distichus_contig107777.660.1 vs. uniprot
Match: A0A7S4EH97_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EH97_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.370e-15 Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = 1
Query: 16 LAAAP--SIMVKTGKVQVVAELAKEYGFDDLGGNRPPSIRSLRFLLPTYLFPKV---LPEGVEVA---ASFVPDWLLPMDVMRNGRPP 255
LAA P ++M ++G V+VVAELAKE+ F+DL GNRPPSIRSL++LLP ++FP + L +G E+ + +PD LLP +G PP
Sbjct: 315 LAALPKTTMMERSGNVEVVAELAKEFDFNDLDGNRPPSIRSLKYLLPNFVFPSIEKELEDGKEIPDWIKNNIPDILLPWSTFSSGPPP 402
BLAST of mRNA_F-distichus_contig107777.660.1 vs. uniprot
Match: A0A8J5XNA8_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XNA8_DIALT) HSP 1 Score: 79.3 bits (194), Expect = 1.470e-15 Identity = 47/89 (52.81%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 1 RAGAALAAAPSIMVK--TGKVQVVAELAKEYGFDDLGGNRPPSIRSLRFLLPTYLFPKVLPEGVEVAASF---VPDWLLPMDVMRNGRP 252
RA ALA AP M++ +G VQVVAELA+++GFDD G RP SIRSLRFLLP Y+FP + +G+ V VPD LP V + G P
Sbjct: 264 RATVALACAPPDMLRALSGSVQVVAELAEQFGFDDEGATRPASIRSLRFLLPQYVFPDMRKQGLPVPGWLDERVPDVKLPWAVFKGGPP 352
BLAST of mRNA_F-distichus_contig107777.660.1 vs. uniprot
Match: A0A7S0LBI5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LBI5_9EUKA) HSP 1 Score: 79.0 bits (193), Expect = 2.280e-15 Identity = 40/78 (51.28%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 34 IMVKTGKVQVVAELAKEYGFDDLGGNRPPSIRSLRFLLPTYLFPKVLPEGVEVAA---SFVPDWLLPMDVMRNGRPPS 258
++ ++G+VQVVAELAKE+ F + G+RPPSIRSL FLLP Y FP++ G+ + A S VPD LLP + +G PP+
Sbjct: 291 LLERSGRVQVVAELAKEFDFLEADGSRPPSIRSLAFLLPNYAFPQMEAGGLRIPAWVRSSVPDVLLPWSIFSSGSPPA 368
BLAST of mRNA_F-distichus_contig107777.660.1 vs. uniprot
Match: A0A1Z5JS15_FISSO (Dehydrogenase/reductase SDR family member 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JS15_FISSO) HSP 1 Score: 76.3 bits (186), Expect = 2.390e-14 Identity = 40/81 (49.38%), Postives = 56/81 (69.14%), Query Frame = 1
Query: 13 ALAAAPSIMVKTGKVQVVAELAKEYGFDDLGGNRPPSIRSLRFLLPTYLFPKVLPEGVEVAASFVPDWLLPMDVMRNGRPP 255
A+AA P+ M K+G QVVAELA+EYGF + G PPSIRSLRFLLP+Y + + + ++ + +PD+ LP +M G+PP
Sbjct: 325 AVAADPNNMKKSGSYQVVAELAQEYGFTEDDGRTPPSIRSLRFLLPSYAMDETIRK--KIPSWLIPDFKLPFWIMSQGQPP 403
BLAST of mRNA_F-distichus_contig107777.660.1 vs. uniprot
Match: A0A7S2Q2P0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q2P0_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 6.260e-14 Identity = 44/88 (50.00%), Postives = 56/88 (63.64%), Query Frame = 1
Query: 13 ALAAAPSIMVK--TGKVQVVAELAKEYGFDDLGGNRPPSIRSLRFLLPTYLFPKVLPEGVEVAASFV----PDWLLPMDVMRNGRPPS 258
AL A S M+K +GKV VVAELAKE GF D+ G PPSIRSL+F+LP ++FP++ E S+V PD+LLP G PP+
Sbjct: 323 ALLTANSDMMKERSGKVVVVAELAKELGFTDVDGRLPPSIRSLKFILPNFVFPQIEKESGSSLPSWVTDNVPDYLLPWSTFSGGPPPT 410
BLAST of mRNA_F-distichus_contig107777.660.1 vs. uniprot
Match: F0Y356_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y356_AURAN) HSP 1 Score: 74.3 bits (181), Expect = 8.520e-14 Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 34 IMVKTGKVQVVAELAKEYGFDDLGGNRPPSIRSLRFLLPTYLFPKVLPEGVEVAASF----VPDWLLPMDVMRNGRPP 255
++ ++G V+V+AELA E+GFDD+ G RP SIRSLR+LLP ++FP+V E + ++ VPD LLP V G PP
Sbjct: 251 LLARSGNVEVIAELADEFGFDDVDGARPCSIRSLRYLLPNFVFPQVEKEAGKPVPAWIRDNVPDVLLPWSVFSAGPPP 328
BLAST of mRNA_F-distichus_contig107777.660.1 vs. uniprot
Match: A0A8J9X4G2_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X4G2_PHATR) HSP 1 Score: 73.6 bits (179), Expect = 1.650e-13 Identity = 43/87 (49.43%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 13 ALAAAPSIMVKTGKVQVVAELAKEYGFDDLGGNRPPSIRSLRFLLPTYLFPKVLPEGVEVAASFVPDWLLPMD-----VMRNGRPPS 258
A A PS M KTG QVVAEL++EY F D+ GNRPPSIRSLRFLLP+Y F + VP W+ VM G+PP+
Sbjct: 255 ATATDPSNMRKTGTYQVVAELSEEYNFFDVNGNRPPSIRSLRFLLPSYAFD-------QATRDMVPGWMXXXXXXXXXVMAQGQPPA 334 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig107777.660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig107777.660.1 >prot_F-distichus_contig107777.660.1 ID=prot_F-distichus_contig107777.660.1|Name=mRNA_F-distichus_contig107777.660.1|organism=Fucus distichus monoicous|type=polypeptide|length=87bp RAGAALAAAPSIMVKTGKVQVVAELAKEYGFDDLGGNRPPSIRSLRFLLPback to top mRNA from alignment at F-distichus_contig107777:4..897+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig107777.660.1 ID=mRNA_F-distichus_contig107777.660.1|Name=mRNA_F-distichus_contig107777.660.1|organism=Fucus distichus monoicous|type=mRNA|length=894bp|location=Sequence derived from alignment at F-distichus_contig107777:4..897+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig107777:4..897+ >mRNA_F-distichus_contig107777.660.1 ID=mRNA_F-distichus_contig107777.660.1|Name=mRNA_F-distichus_contig107777.660.1|organism=Fucus distichus monoicous|type=CDS|length=522bp|location=Sequence derived from alignment at F-distichus_contig107777:4..897+ (Fucus distichus monoicous)back to top |