mRNA_F-distichus_contig107767.658.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig107767.658.1
Unique NamemRNA_F-distichus_contig107767.658.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig107767.658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig107767contigF-distichus_contig107767:287..643 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size357
Cds size357
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929010.5109115-CDS-F-distichus_contig107767:286..6431622929010.5109115-CDS-F-distichus_contig107767:286..643Fucus distichus monoicousCDSF-distichus_contig107767 287..643 -
1690885104.9811502-CDS-F-distichus_contig107767:286..6431690885104.9811502-CDS-F-distichus_contig107767:286..643Fucus distichus monoicousCDSF-distichus_contig107767 287..643 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig107767.658.1prot_F-distichus_contig107767.658.1Fucus distichus monoicouspolypeptideF-distichus_contig107767 287..643 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig107767.658.1

>prot_F-distichus_contig107767.658.1 ID=prot_F-distichus_contig107767.658.1|Name=mRNA_F-distichus_contig107767.658.1|organism=Fucus distichus monoicous|type=polypeptide|length=119bp
SYDNLARLYNSALAHDSLQVWNAMLKGLEKENDIMKMVIEVGSPSEAWRA
LKNMVDESEEVAYDRAKREFKTLQMGTDETVSEYFARVNIAMTKMQRNNV
AMPEREIKSIIMGSLMSRF
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mRNA from alignment at F-distichus_contig107767:287..643-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig107767.658.1 ID=mRNA_F-distichus_contig107767.658.1|Name=mRNA_F-distichus_contig107767.658.1|organism=Fucus distichus monoicous|type=mRNA|length=357bp|location=Sequence derived from alignment at F-distichus_contig107767:287..643- (Fucus distichus monoicous)
TCCTACGATAACCTCGCGAGATTATATAATTCCGCGCTAGCGCACGACTC
TCTGCAGGTTTGGAATGCAATGTTAAAAGGGCTAGAAAAGGAAAACGATA
TCATGAAGATGGTGATCGAAGTAGGTTCCCCATCGGAGGCTTGGCGTGCC
CTCAAAAACATGGTAGACGAGTCGGAGGAAGTCGCGTATGATAGAGCAAA
AAGAGAATTCAAAACACTTCAGATGGGAACGGATGAAACGGTGTCCGAAT
ACTTTGCCCGTGTAAACATTGCGATGACCAAGATGCAGAGAAACAACGTC
GCAATGCCCGAACGAGAAATCAAGAGTATAATAATGGGTAGCTTGATGTC
CCGTTTC
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Coding sequence (CDS) from alignment at F-distichus_contig107767:287..643-

>mRNA_F-distichus_contig107767.658.1 ID=mRNA_F-distichus_contig107767.658.1|Name=mRNA_F-distichus_contig107767.658.1|organism=Fucus distichus monoicous|type=CDS|length=714bp|location=Sequence derived from alignment at F-distichus_contig107767:287..643- (Fucus distichus monoicous)
TCCTACGATAACCTCGCGAGATTATATAATTCCGCGCTAGCGCACGACTC
TCTGCAGGTTTGGAATGCAATGTTAAAAGGGCTAGAAAAGGAAAACGATA
TCATGAAGATGGTGATCGAAGTAGGTTCCCCATCGGAGGCTTGGCGTGCC
CTCAAAAACATGGTAGACGAGTCGGAGGAAGTCGCGTATGATAGAGCAAA
AAGAGAATTCAAAACACTTCAGATGGGAACGGATGAAACGGTGTCCGAAT
ACTTTGCCCGTGTAAACATTGCGATGACCAAGATGCAGAGAAACAACGTC
GCAATGCCCGAACGAGAAATCAAGAGTATAATAATGGGTAGCTTGATGTC
CCGTTTCTCCTACGATAACCTCGCGAGATTATATAATTCCGCGCTAGCGC
ACGACTCTCTGCAGGTTTGGAATGCAATGTTAAAAGGGCTAGAAAAGGAA
AACGATATCATGAAGATGGTGATCGAAGTAGGTTCCCCATCGGAGGCTTG
GCGTGCCCTCAAAAACATGGTAGACGAGTCGGAGGAAGTCGCGTATGATA
GAGCAAAAAGAGAATTCAAAACACTTCAGATGGGAACGGATGAAACGGTG
TCCGAATACTTTGCCCGTGTAAACATTGCGATGACCAAGATGCAGAGAAA
CAACGTCGCAATGCCCGAACGAGAAATCAAGAGTATAATAATGGGTAGCT
TGATGTCCCGTTTC
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