mRNA_F-distichus_contig107733.653.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig107733.653.1 vs. uniprot
Match: D7G2Q6_ECTSI (V-type proton ATPase subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Q6_ECTSI) HSP 1 Score: 131 bits (330), Expect = 7.550e-35 Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 1
Query: 25 QLKTEVQQMHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKVRTA 228
QLKTEVQQ+HAGMIRWCRAHFGEAFSAWMHVKL+KSY ESVMRYGLPVDFSAF+LA KKGQEAKV+ A
Sbjct: 326 QLKTEVQQLHAGMIRWCRAHFGEAFSAWMHVKLVKSYVESVMRYGLPVDFSAFVLATKKGQEAKVKEA 393
BLAST of mRNA_F-distichus_contig107733.653.1 vs. uniprot
Match: A0A835Z1N8_9STRA (V-type proton ATPase subunit C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N8_9STRA) HSP 1 Score: 102 bits (254), Expect = 6.320e-24 Identity = 46/75 (61.33%), Postives = 56/75 (74.67%), Query Frame = 1
Query: 4 ETRLPAPQLKTEVQQMHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKVRTA 228
E A QLK E QQ+HAGM+RWC+AHFGEA AWMH+KLI+ + ESV+RYGLPVDFS ++ KG+EA V A
Sbjct: 328 ELEREANQLKLEAQQLHAGMLRWCKAHFGEAMIAWMHIKLIRGFVESVLRYGLPVDFSTLLVECAKGKEAAVTKA 402
BLAST of mRNA_F-distichus_contig107733.653.1 vs. uniprot
Match: A0A8K1CMT2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMT2_PYTOL) HSP 1 Score: 94.0 bits (232), Expect = 6.600e-21 Identity = 38/67 (56.72%), Postives = 54/67 (80.60%), Query Frame = 1
Query: 25 QLKTEVQQMHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKVRT 225
+L+ EV ++ +G+IRWC+AHFGE F AWMH+K+I+++ ESV+RYGLPV+F M P KG+E K+RT
Sbjct: 306 ELEVEVDRLWSGLIRWCKAHFGETFIAWMHIKMIRTFVESVLRYGLPVNFVVVMYRPHKGKEKKLRT 372
BLAST of mRNA_F-distichus_contig107733.653.1 vs. uniprot
Match: A0A397CBR0_9STRA (V-type proton ATPase subunit C n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CBR0_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.080e-20 Identity = 39/76 (51.32%), Postives = 58/76 (76.32%), Query Frame = 1
Query: 1 NETRLPAPQLKTEVQQMHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKVRTA 228
NET + +L+ EV ++++G++RWC+AHFGE F AWMHVK ++ + ESV+RYGLPV+F A + PK G++ K+R A
Sbjct: 190 NETLVA--ELEVEVNRLYSGLLRWCKAHFGETFIAWMHVKAVRVFVESVLRYGLPVNFVAMLFKPKAGRDKKLRQA 263
BLAST of mRNA_F-distichus_contig107733.653.1 vs. uniprot
Match: W4H5I3_9STRA (V-type proton ATPase subunit C n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5I3_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 3.270e-20 Identity = 39/76 (51.32%), Postives = 58/76 (76.32%), Query Frame = 1
Query: 1 NETRLPAPQLKTEVQQMHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKVRTA 228
NET + +L+ EV ++++G++RWC+AHFGE F AWMHVK ++ + ESV+RYGLPV+F A + PK G++ K+R A
Sbjct: 300 NETLVA--ELEVEVNRLYSGLLRWCKAHFGETFIAWMHVKAVRVFVESVLRYGLPVNFVAMLFKPKAGRDKKLRQA 373
BLAST of mRNA_F-distichus_contig107733.653.1 vs. uniprot
Match: A0A485LS38_9STRA (V-type proton ATPase subunit C n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LS38_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 4.520e-20 Identity = 39/74 (52.70%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 1 NETRLPAPQLKTEVQQMHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKVR 222
NET + +L+ EV +++ G++RWC+AHFGE F AWMHVK I+ + ESV+RYGLPV+F A + PK G+E ++R
Sbjct: 300 NETMIA--ELEVEVNRLYTGLLRWCKAHFGETFIAWMHVKAIRVFVESVLRYGLPVNFVALLYKPKSGKEKRLR 371
BLAST of mRNA_F-distichus_contig107733.653.1 vs. uniprot
Match: A0A067CU70_SAPPC (V-type proton ATPase subunit C n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CU70_SAPPC) HSP 1 Score: 91.3 bits (225), Expect = 6.200e-20 Identity = 38/75 (50.67%), Postives = 58/75 (77.33%), Query Frame = 1
Query: 1 NETRLPAPQLKTEVQQMHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKVRT 225
NET + +L+ EV +++ G++RWC+AHFGE F AWMHVK ++++ E+V+RYGLPV+F+A + K G+E K+RT
Sbjct: 300 NETMIA--ELEVEVNRLYTGLLRWCKAHFGETFIAWMHVKAVRTFVEAVLRYGLPVNFTAILYRLKAGKEKKLRT 372
BLAST of mRNA_F-distichus_contig107733.653.1 vs. uniprot
Match: K0TLZ5_THAOC (V-type proton ATPase subunit C (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLZ5_THAOC) HSP 1 Score: 89.0 bits (219), Expect = 6.810e-20 Identity = 38/72 (52.78%), Postives = 53/72 (73.61%), Query Frame = 1
Query: 4 ETRLPAPQLKTEVQQMHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKV 219
++ L QL+ EV M +G+ RWC+ H+GEAF AWMHVK+I+ + ESV+RYGLPVDF+A + G+EAK+
Sbjct: 144 KSALALEQLQVEVDNMRSGLTRWCKTHYGEAFVAWMHVKVIRVFVESVLRYGLPVDFTAVLYKVGSGKEAKL 215
BLAST of mRNA_F-distichus_contig107733.653.1 vs. uniprot
Match: A0A6G0WZK4_9STRA (V-type proton ATPase subunit C n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZK4_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.190e-19 Identity = 38/74 (51.35%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 1 NETRLPAPQLKTEVQQMHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQEAKVR 222
NET + +L+ EV +++ G++RWC+AHFGE F AWMHVK ++ + ESV+RYGLPV+F A + PK G++ K+R
Sbjct: 300 NETMIA--ELEVEVNRLYTGLLRWCKAHFGETFIAWMHVKAVRVFVESVLRYGLPVNFVAVLYKPKAGKDKKLR 371
BLAST of mRNA_F-distichus_contig107733.653.1 vs. uniprot
Match: A0A7S1BQE7_9STRA (V-type proton ATPase subunit C (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQE7_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.030e-19 Identity = 36/62 (58.06%), Postives = 49/62 (79.03%), Query Frame = 1
Query: 25 QLKTEVQQMHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMRYGLPVDFSAFMLAPKKGQE 210
Q++ EV+ M G+ RWCR H+GEAF AWMH+K+I+ + ESV+RYGLPVDF+A + KKG+E
Sbjct: 236 QMQVEVEGMKTGLTRWCRTHYGEAFVAWMHIKVIRVFVESVLRYGLPVDFTAVLYMTKKGKE 297 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig107733.653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig107733.653.1 >prot_F-distichus_contig107733.653.1 ID=prot_F-distichus_contig107733.653.1|Name=mRNA_F-distichus_contig107733.653.1|organism=Fucus distichus monoicous|type=polypeptide|length=77bp NETRLPAPQLKTEVQQMHAGMIRWCRAHFGEAFSAWMHVKLIKSYCESVMback to top mRNA from alignment at F-distichus_contig107733:1440..1670- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig107733.653.1 ID=mRNA_F-distichus_contig107733.653.1|Name=mRNA_F-distichus_contig107733.653.1|organism=Fucus distichus monoicous|type=mRNA|length=231bp|location=Sequence derived from alignment at F-distichus_contig107733:1440..1670- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig107733:1440..1670- >mRNA_F-distichus_contig107733.653.1 ID=mRNA_F-distichus_contig107733.653.1|Name=mRNA_F-distichus_contig107733.653.1|organism=Fucus distichus monoicous|type=CDS|length=462bp|location=Sequence derived from alignment at F-distichus_contig107733:1440..1670- (Fucus distichus monoicous)back to top |