mRNA_F-distichus_contig10660.563.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10660.563.1 vs. uniprot
Match: D8LSA7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSA7_ECTSI) HSP 1 Score: 313 bits (802), Expect = 1.380e-105 Identity = 152/182 (83.52%), Postives = 173/182 (95.05%), Query Frame = 1
Query: 178 RLFEEILTEQHAAPITGVLIIQRESVVHLVETSMDTSTAFLRQIQSMQANPEPSSRVMENVKILISSEDCPSPFFTKWFHYDLQLNEENNVDINNEDPIEASWGVHDKLVELASEMRQHSGTSVSELKRKYNHLVPSNERVLGLAESENVMSLSEYLHVYDTPISATLESERVWPIPALIRY 723
++FEEIL+EQHAA ITGVLI+Q+ES++HLVETSMDTSTA LRQIQSM+A+ +PS+RVMENVKIL+SSEDCP+P+F KWFHY++QLN E+NVDI+ EDP+EASWGV+DKLVELASEMRQHSGTSVSELKRKYNHLVPSNERVLGLAE+E MSLSEYL VYDTPISATLESERVWPIPALIRY
Sbjct: 5 QVFEEILSEQHAATITGVLIVQKESIIHLVETSMDTSTALLRQIQSMEADLDPSARVMENVKILVSSEDCPAPYFAKWFHYNIQLNAESNVDIDKEDPVEASWGVYDKLVELASEMRQHSGTSVSELKRKYNHLVPSNERVLGLAETEKNMSLSEYLQVYDTPISATLESERVWPIPALIRY 186
BLAST of mRNA_F-distichus_contig10660.563.1 vs. uniprot
Match: A0A835YNJ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNJ4_9STRA) HSP 1 Score: 204 bits (519), Expect = 2.040e-62 Identity = 98/197 (49.75%), Postives = 133/197 (67.51%), Query Frame = 1
Query: 148 DPDEIVRYHERLFEEILTEQHAAPITGVLIIQRESVVHLVETSMDTSTAFLRQIQSM-----QANPEPSSRVMENVKILISSEDCPSPFFTKWFHYDLQLNEENNVDINNEDPIEASWGVHDKLVELASEMRQHSGTSVSELKRKYNHLVPSNERVLGLAESENVMSLSEYLHVYDTPISATLESERVWPIPALIRY 723
D +V+ HER+F+ +L E+HAAPITGVLI Q++S +HL+ETSMDT+T+FLR +Q+ + ++L + EDCP P+F KWFHY +QL + VD+ EDP+EA+WGV D+L ELA+E+ G S S+LKR+Y HLV SNER LA ++ M + EYL +YDTPI A LE ERVWP ++RY
Sbjct: 6 DSAAVVQLHERIFDAVLAEEHAAPITGVLITQKDSTLHLIETSMDTATSFLRHLQARGXXXXXXXXXXXXXXIGAARLLAACEDCPCPYFAKWFHYHVQLMPDAGVDVEREDPVEAAWGVLDRLAELAAEVAAAGGASSSDLKRRYAHLVASNERCAALARADAFMPIGEYLDLYDTPIDAALEGERVWPAQQVVRY 202
BLAST of mRNA_F-distichus_contig10660.563.1 vs. uniprot
Match: A0A6J8DNX3_MYTCO (BLUF domain-containing protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8DNX3_MYTCO) HSP 1 Score: 88.6 bits (218), Expect = 3.340e-17 Identity = 67/235 (28.51%), Postives = 119/235 (50.64%), Query Frame = 1
Query: 46 TSYLDHLDARLDMQGGRASLARLLLVATKGKGADDPDEIVRYHERLFEEILTEQHAAP---ITGVLIIQRESVVHLVETSMDTSTAFLRQ-IQSMQANPEPSSRVMENVKILISSEDCPSPFFTKWFHYDLQLNEENNVDINNEDPIEASWG-VHDKLVEL-------ASEMRQHSGTSVSELKRKYNHLVPSNERVLGLAESEN--VMSLSEYLHVYDTPISATLESERVWPIP 708
TS L+ ++ R + L R++ +A+ D D+I YHE L + + + Q + ITG+L++ + +VH+VET+ T LR+ I+ + N E S+ + VKIL+ S D P + W L++ + +++ D E++ V D L++L A + + S +L K L+P + L E ++ +M++ EYL++Y+ P L+SE VWP+P
Sbjct: 15 TSLLELIEDRNKALNKKNLLHRMVYIASLRNEDADSDQIANYHENLKKNLESAQQYSEHVSITGLLLVYTKHIVHIVETT----TEMLREVIKDSKKNMESSNGIFSQVKILVVSHDIPERLYQNWMFKTLEI---QSARLDSYDSSESTDKIVLDCLIQLLKLGNHVAKIPKGNFKNSFDQLHSKVPDLLPQQAMLHFLLEEDDCSMMTVKEYLNMYEQPYDVVLDSELVWPLP 242
BLAST of mRNA_F-distichus_contig10660.563.1 vs. uniprot
Match: A0A151NXF5_ALLMI (Uncharacterized protein n=2 Tax=Crocodylia TaxID=1294634 RepID=A0A151NXF5_ALLMI) HSP 1 Score: 86.3 bits (212), Expect = 2.540e-16 Identity = 65/229 (28.38%), Postives = 114/229 (49.78%), Query Frame = 1
Query: 40 LPTS-YLDHLDARLDMQGGRASLARLLLVATKGKGADDPDEIVRYHERLFEEILTEQHAAPITGVLIIQRESVVHLVETSMDTSTAFLRQIQSMQANPEPSSRVMENVKILISSEDCPSPFFTKWFHYDLQLNEENNVDIN-NEDPIEASWGVHDKLVELASEMRQHSGTSVSELKRKYNHLVPS----NERVLGLAESENVMSLSEYLHVYDTPISATLESERVWPIP 708
LP S L L+ R Q + L RL VA +GAD E+ YHERLF+ IL P++G+L++ S++H+VE+S T L + S+++ + S +++ +KIL+ S + P+ F +W+ + D+ ++ E L++L + + + S L + LVP+ E + L +++ +S E+L +Y P+ ++SE VWP P
Sbjct: 23 LPRSTLLGALEERRRAQLKKFLLHRLFFVARLPEGADG-GEVTGYHERLFQNILKYHLGEPVSGLLLLYPNSILHIVESSSGTIYRILHDLASLRS--QGPSALLQEIKILVVSHNIPTKLFLQWYVTMVTPPVTYLEDVTQSQSTEEVVTECLTLLLKLGAYISKTFKVSSKALGNNLHTLVPNLLIPAETINYLCNAKDCLSPEEFLKMYKDPLQPAMDSETVWPTP 248
BLAST of mRNA_F-distichus_contig10660.563.1 vs. uniprot
Match: A0A3Q0H0Q7_ALLSI (LOW QUALITY PROTEIN: testis-expressed protein 47 n=2 Tax=Crocodylia TaxID=1294634 RepID=A0A3Q0H0Q7_ALLSI) HSP 1 Score: 78.6 bits (192), Expect = 5.760e-14 Identity = 56/192 (29.17%), Postives = 97/192 (50.52%), Query Frame = 1
Query: 157 EIVRYHERLFEEILTEQHAAPITGVLIIQRESVVHLVETSMDTSTAFLRQIQSMQANPEPSSRVMENVKILISSEDCPSPFFTKWFHYDLQLNEENNVDINNEDPIEASWGVHDKLVELASEMRQHS--GTSVSE--LKRKYNHLVPS----NERVLGLAESENVMSLSEYLHVYDTPISATLESERVWPIP 708
E+ YHERLF+ IL P++G+L++ SV+H+VE+S T L + S+Q+ + S +++ +KIL+ S + P+ F +W+ + L D+ E V + + L + +S T VS L + LVP+ E + L +++ +S E+L +Y P+ ++SE VWP P
Sbjct: 3 EVTGYHERLFQNILKYHLGEPVSGLLLLYPNSVLHIVESSSGTIYRILHDLASLQS--QGPSALLQEIKILVVSHNIPTKLFLQWYVTMVTLPVTYLEDVTQSQSTEE---VVTECLTLLLWIXWYSLFTTKVSSKSLGNNLHTLVPNLLIPAETINYLCNAKDCLSPEEFLKMYKDPLQPAMDSETVWPTP 189
BLAST of mRNA_F-distichus_contig10660.563.1 vs. uniprot
Match: UPI001CF7C37C (testis-expressed protein 47 n=1 Tax=Varanus komodoensis TaxID=61221 RepID=UPI001CF7C37C) HSP 1 Score: 72.8 bits (177), Expect = 2.850e-11 Identity = 57/219 (26.03%), Postives = 110/219 (50.23%), Query Frame = 1
Query: 70 ARLDMQGGRASLARLLLVATKGKGADDPDEIVRYHERLFEEILTEQHAAP-ITGVLIIQRESVVHLVETSMDTSTAFLRQIQSMQANPEPSSRVME-NVKILISSEDCPSPFFTKWFHYDLQL-NEENNVDINNEDPIEAS-WGVHDKLVELASEMRQHSGTSVS---ELKRKYNHLVPSNERVLGLAESENVMSLSEYLHVYDTPISATLESERVWPI 705
AR G ++ L RL+ +A D ++ Y E+LF + + + +TG+L++ VVH++E S D + LR ++ + E RV+ + KILI S + P F +W + L + + D+ +E+P EA L++L ++++ + + + K L+ + L E + ++S +EYLH++D+P+ + +SE +WP+
Sbjct: 53 ARQRENGKKSLLHRLIFLAKISPDLADKRDLAAYWEQLFTSLPSCGYQGEGVTGLLLLYPTYVVHILEASSDVLYSILRDLRDV----EQQQRVLILDAKILIMSHNLPIRLFQQWNYKVLNMPGTQLGYDMPHEEPAEAIVCECLAVLLKLGMHLQKYPKSPKNLPDTILEKVPELIVPQGTICYLLECQELLSPAEYLHLFDSPVDISTDSEIMWPL 267
BLAST of mRNA_F-distichus_contig10660.563.1 vs. uniprot
Match: A0A507D5V2_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D5V2_9FUNG) HSP 1 Score: 71.6 bits (174), Expect = 5.710e-11 Identity = 63/248 (25.40%), Postives = 111/248 (44.76%), Query Frame = 1
Query: 49 SYLDHLDARLDMQGGRASLARLLLVATKGKGADDPDEIVRYHERLFEEILTEQHA----------------APITGVLIIQRESVVHLVETSMDTSTAFLRQIQS---MQANPEPSSRVMENVKILISSEDCPSPFFTKWFH--YDLQLNEENNVD---INNEDPIEASWGVHDKLVELASEM----RQHSGTSVSELKRKYNHLVPSNERVLGLAESENVMSLSEYLHVYDTPISATLESERVWPIP 708
S LD++ +++ +A++ R ++ G D E+ Y +R + + H ITG+L+IQ S +H++E+S T+ + + S + P SS V K+L++ ED + FF W D + E +VD + +++ ++ V L+ L S + + +V E+ KY P N V LA S+NV LSE++ P++ LE + V+P P
Sbjct: 19 SVLDYIRESTNIR--KATVYRAMICGELAPGGDR-SELAAYFQRFIRHLQQQHHQHQNSSDASGPSDIGQHGSITGLLLIQPTSYLHVIESSTKTTVNVMTDLLSPHKSDSEPNLSSLVQGKPKLLLAQEDALARFFPTWSSKILDPPASREKDVDPDSLGSQEILKTISEVCVNLLSLGSSLSSLPKSDVRQAVDEILEKYGEYTPRNTLVTALAASDNVTYLSEWVEAMG-PVNLKLEGDLVYPAP 262
BLAST of mRNA_F-distichus_contig10660.563.1 vs. uniprot
Match: A0A1S8VQP3_9FUNG (Uncharacterized protein n=3 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VQP3_9FUNG) HSP 1 Score: 72.0 bits (175), Expect = 6.300e-11 Identity = 68/265 (25.66%), Postives = 120/265 (45.28%), Query Frame = 1
Query: 7 LSIPTTGCMMSLPT----SYLDHLDARLDMQGGRASLARLLLVATKGKGADDPDEIVRYHERLFEEILTEQHAAPITGVLIIQRESVVHLVETSMDTSTAFLRQIQSM-QANPEPSSR----------------VMENVKILISSEDCPSPFFTKWFHYDLQLNEENNVDINNEDPIEASWGVHDKLVE-----LASEMRQHSGTSVSELKR-------KYNHLVPSNERVLGLAESENVMSLSEYLHVYDTPISATLESERVWP 702
+S TG M+ LP +YLD + R + + +++V K D E Y++R F+ +E ITGVL+I RES VH++E + + +R I ++ Q P+ S +M N +IL +++ F+ W + L E ++ +I+ + +S DKL+ L + +Q S SELK ++ +P + LA ++++S+ E+L +D ++ T ESE +WP
Sbjct: 38 ISTGNTGVMLPLPEETRLNYLDIIRERFKDENKMPTTCIVVIVGEISKDLDRA-EFSTYYQRFFKRQQSESEL--ITGVLLIYRESFVHVLEATQKVVYSLIRDIGALPQYVPKVDSSTLSTDKKGIGHITSRPMMFNTRILTFTDNNYERFYPFWASKVIDLKENSSYEIDMS--LFSSESSLDKLISDTCIGLITIGKQLSTLQKSELKHVFEDITDRFKEYIPHQNLLTELAACQDIISVGEWLECFDNHVTLTQESEIIWP 297
BLAST of mRNA_F-distichus_contig10660.563.1 vs. uniprot
Match: UPI00046BCCED (testis-expressed protein 47 n=1 Tax=Eptesicus fuscus TaxID=29078 RepID=UPI00046BCCED) HSP 1 Score: 69.3 bits (168), Expect = 3.290e-10 Identity = 56/235 (23.83%), Postives = 110/235 (46.81%), Query Frame = 1
Query: 40 LPTSYLDHLDARLDMQGGRASLARLLLVATKGKGADDPDEIVRYHERLFEEILTEQHAAPITGVLIIQRESVVHLVETSMDTSTAFLRQIQSMQANPEPSSRVMENVKILISSEDCPSPFFTKWFHYDLQLNEENNVDINNEDPIEASWGVHDKLVELASEMRQHSGTSVSELK-----RKYNHLVPSNERVLG------LAESENVMSLSEYLHVYDTPISATLESERVWPIPA 711
L +YL L+ + +Q + L R+ LVA K K + ++ Y+E+LF+ I + +TG+L+I R ++H++E+S T L + + + ++ +KI++ S + P+ F +W ++ V + D + S + + + E ++ + + LK N P+ E +L L ESE + ++++Y+ PI T ++E VWP P+
Sbjct: 26 LRNNYLHFLEEKQKLQLKKFLLDRMFLVA-KTKDNVEKKDVTEYYEQLFQSIAKPYASEAVTGLLLIYRTFILHILESSSGTLYRILSDY--INHKKKGGNYFIQGMKIIVMSHNIPTRIFMQWHVIVIK------VPVMYLDDVTQSQSLREVITEFLTQTHKLALYFFKTLKVGAKGPSENLHQPAPELLLPEQIIKYLYESEEFIDPETFINMYNRPIHITFDTEVVWPAPS 251
BLAST of mRNA_F-distichus_contig10660.563.1 vs. uniprot
Match: G1P7S8_MYOLU (Testis expressed 47 n=5 Tax=Myotis TaxID=9434 RepID=G1P7S8_MYOLU) HSP 1 Score: 67.8 bits (164), Expect = 1.150e-9 Identity = 52/232 (22.41%), Postives = 105/232 (45.26%), Query Frame = 1
Query: 49 SYLDHLDARLDMQGGRASLARLLLVATKGKGADDPDEIVRYHERLFEEILTEQHAAPITGVLIIQRESVVHLVETSMDTSTAFLRQIQSMQANPEPSSRVMENVKILISSEDCPSPFFTKWFHYDLQLNEENNVDINNEDPIEASWGVHDKLVELASEMRQHSGTSVSELK-----------RKYNHLVPSNERVLGLAESENVMSLSEYLHVYDTPISATLESERVWPIPA 711
+YL + + +Q + L R+ LVA + D + Y+E++F+ I P+TG+L++ R +VH++E+S T L + + N ++ +KI++ S + P+ F +W ++ V + D + S + + + E ++ + + LK + L+ + + L SE M ++++Y+ PI TL++E VWP P+
Sbjct: 29 NYLHFQEEKQRLQLKKFLLDRMFLVAMTRDNIEKKD-VTEYYEQVFQSIAKPHIGEPVTGLLLMYRTFIVHILESSSGTLYRILLDYINHRKNR--GEYFIQGMKIIVVSHNIPTRIFMQWHVVVIK------VPVMYLDDVTQSQSLEEVITEFLTQTHKLALYFFKTLKVGVKGPGESLHQPAPELLLQEQIIKYLYRSEEFMEPETFINMYNRPIHVTLDTEVVWPAPS 251 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10660.563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10660.563.1 >prot_F-distichus_contig10660.563.1 ID=prot_F-distichus_contig10660.563.1|Name=mRNA_F-distichus_contig10660.563.1|organism=Fucus distichus monoicous|type=polypeptide|length=232bp MMSLPTSYLDHLDARLDMQGGRASLARLLLVATKGKGADDPDEIVRYHERback to top mRNA from alignment at F-distichus_contig10660:2..3879- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10660.563.1 ID=mRNA_F-distichus_contig10660.563.1|Name=mRNA_F-distichus_contig10660.563.1|organism=Fucus distichus monoicous|type=mRNA|length=3878bp|location=Sequence derived from alignment at F-distichus_contig10660:2..3879- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10660:2..3879- >mRNA_F-distichus_contig10660.563.1 ID=mRNA_F-distichus_contig10660.563.1|Name=mRNA_F-distichus_contig10660.563.1|organism=Fucus distichus monoicous|type=CDS|length=1392bp|location=Sequence derived from alignment at F-distichus_contig10660:2..3879- (Fucus distichus monoicous)back to top |