mRNA_F-distichus_contig106502.555.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig106502.555.1
Unique NamemRNA_F-distichus_contig106502.555.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: UPI001939624B (uncharacterized protein LOC120346556 n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939624B)

HSP 1 Score: 301 bits (771), Expect = 2.380e-95
Identity = 137/233 (58.80%), Postives = 178/233 (76.39%), Query Frame = 1
Query:    1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPIPKHP 699
            P VF +E GA G  K LR  F TFGI +E+ +DG   FT G+TQ FL++W V+HR++SVANPH+NCRAEL VK VKR+++ N GPSG LDVD F RA+L YRN+ DP T+ SPA+ IFGR +RD +P+  G Y+PH TWREL+ HRE+A+ARRH    E+W+AHT+ L  L  GD+V+LQNL+GNHP++WERTG ++E ++Y QY+VK+DG+GR T+RNR HLRKF P  K P
Sbjct:  248 PMVFRSESGAHGLVKRLRESFVTFGIPEEMTSDGGPQFTSGITQEFLKSWGVRHRITSVANPHANCRAELGVKTVKRMLSNNVGPSGFLDVDKFQRAMLLYRNSIDPETRVSPAIIIFGRPIRDLIPIPLGRYSPHETWRELMGHREKALARRHCMEHERWKAHTRLLPPLQVGDHVYLQNLLGNHPKKWERTGTIVEVRQYHQYVVKIDGSGRVTIRNRQHLRKFIPFRKSP 480          
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: A0A6J8BAZ8_MYTCO (Integrase catalytic domain-containing protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8BAZ8_MYTCO)

HSP 1 Score: 294 bits (752), Expect = 6.510e-93
Identity = 133/229 (58.08%), Postives = 168/229 (73.36%), Query Frame = 1
Query:    1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPI 687
            P V+ +E GA G  K LR  F TFGI +E+ +DG   FT G TQ FL+ W V+HRLSSVANPH+NCRAE+AVK VKR++ +N    G+LDVD F RA+L YRN+ DP TK SPA+ +FGR +RD +P+  G Y+PH TW EL+ HRE A+A+RH    E+W  HT  L  L  GD+V++QNLVGNHPRRWERTG V+E ++Y QY+++VDGTGR T+RNR HLRKF P 
Sbjct:  201 PMVYKSESGAEGLVKRLRETFVTFGIPEELTSDGGPQFTAGKTQEFLKAWGVRHRLSSVANPHANCRAEMAVKTVKRMLVDNITAIGSLDVDKFQRALLMYRNSIDPETKASPALILFGRPIRDAIPILMGRYSPHETWTELMSHREMALAKRHSREHERWNEHTHHLPTLQVGDHVYIQNLVGNHPRRWERTGTVVEVRQYHQYVIRVDGTGRVTIRNRQHLRKFTPF 429          
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: A0A8B6HT33_MYTGA (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6HT33_MYTGA)

HSP 1 Score: 294 bits (752), Expect = 1.820e-92
Identity = 133/229 (58.08%), Postives = 168/229 (73.36%), Query Frame = 1
Query:    1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPI 687
            P V+ +E GA G  K LR  F TFGI +E+ +DG   FT G TQ FL+ W V+HRLSSVANPH+NCRAE+AVK VKR++ +N    G+LDVD F RA+L YRN+ DP TK SPA+ +FGR +RD +P+  G Y+PH TW EL+ HRE A+A+RH    E+W  HT  L  L  GD+V++QNLVGNHPRRWERTG V+E ++Y QY+++VDGTGR T+RNR HLRKF P 
Sbjct:  343 PMVYKSESGAEGLVKRLRETFVTFGIPEELTSDGGPQFTAGKTQEFLKAWGVRHRLSSVANPHANCRAEIAVKTVKRMLVDNITAVGSLDVDKFQRALLMYRNSIDPETKASPALILFGRPIRDAIPILMGRYSPHETWTELMSHREMALAKRHSREHERWNEHTHHLPTLQVGDHVYIQNLVGNHPRRWERTGTVVEVRQYHQYVIRVDGTGRVTIRNRQHLRKFTPF 571          
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: UPI000719C6F0 (uncharacterized protein LOC106812695 n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719C6F0)

HSP 1 Score: 280 bits (717), Expect = 3.890e-90
Identity = 130/231 (56.28%), Postives = 163/231 (70.56%), Query Frame = 1
Query:    7 VFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPIPKHP 699
            V+ ++ GA G  K LR  F TFGI +E+ +DG   F  G TQ FL+ W V+HR+SSVANPH+NCRAELAVK VKR++ +N   S    VD F RA+L YRN+ DP TK SPA+ +FGR +RD +P+  G Y+PH TW EL+ HRE A+ARRH    E+W  HT  L  L  GD+V+LQNLVGNHPRRWERTG V+E ++Y QY ++VDG GR T+RNR HLRKF P  + P
Sbjct:    2 VYRSDSGAEGLVKRLRETFVTFGIPEELTSDGGPQFKAGKTQEFLKAWGVRHRVSSVANPHANCRAELAVKTVKRMLMDNITRSRVPRVDKFQRALLMYRNSVDPETKSSPALILFGRPIRDAIPIPLGRYSPHETWTELMSHREMALARRHSREHERWNEHTHRLPALQVGDHVYLQNLVGNHPRRWERTGTVIEVRQYHQYAIRVDGAGRVTIRNRQHLRKFTPFNRTP 232          
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: A0A7D9JJU7_PARCT (Uncharacterized protein K02A2.6-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JJU7_PARCT)

HSP 1 Score: 279 bits (713), Expect = 1.300e-89
Identity = 132/233 (56.65%), Postives = 165/233 (70.82%), Query Frame = 1
Query:    1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPIPKHP 699
            P +  A  GA+G    LRR FSTFGI  ++ATDG   FT  LTQ FL+NW V H LSSVA PHSNCRAE+ VK VKR+IT N  P+G+LD D+  RAIL YRNTPDP TK SPA  IFGR ++D +P+ PG Y PH TW++ L  RE+A+  RH+   E+W  HTK L  LV GD+V +QN +G HP +W++TG+V E  ++DQY+V+VDG+GR T+RNR  LRKF  IP HP
Sbjct:   46 PIIERARDGAKGLIDCLRRTFSTFGIPDDLATDGGPEFTSALTQQFLKNWGVHHCLSSVAYPHSNCRAEVGVKTVKRLITNNTSPNGSLDTDNLQRAILQYRNTPDPETKLSPAQCIFGRPIKDFIPILPGRYQPHPTWKDTLAAREEALRNRHVRSAERWTEHTKRLPPLVVGDHVRIQNQIGPHPTKWDKTGRVAEVHQFDQYVVRVDGSGRMTIRNRKFLRKF--IPVHP 276          
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: UPI000B45EB1F (uncharacterized protein LOC110463445 n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B45EB1F)

HSP 1 Score: 275 bits (702), Expect = 8.120e-88
Identity = 126/231 (54.55%), Postives = 164/231 (71.00%), Query Frame = 1
Query:    7 VFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPIPKHP 699
            V+ +E GA G  K LR  F TFGI +E+ +DG   FT G TQ  L+ W V+HRLSSVANPH+NCRAE+AVK VKR++ +N    G+L+VD F RA+L YRN+ DP TK SPA+ +FGR++RD + +  G Y+P  TW EL+ HRE A+A+RH    E W  +T  L  L  GD+V++QNLVGNHP RWERTG V+E ++Y QY+++VDGTGR T+RNR HLR F P   +P
Sbjct:    2 VYKSESGAEGLVKRLRETFVTFGIPEELTSDGGPQFTAGKTQECLKAWGVRHRLSSVANPHANCRAEMAVKTVKRMLVDNITAIGSLNVDKFQRALLMYRNSVDPETKASPALILFGRRIRDAITILMGRYSPRETWTELMSHREMALAKRHSREHELWNDYTHRLPPLQVGDHVYMQNLVGNHPMRWERTGTVVEVRQYQQYVIRVDGTGRVTIRNRQHLRTFTPFQSNP 232          
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: A0A6S7H3A3_PARCT (Transposon Ty3-I Gag-Pol poly n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H3A3_PARCT)

HSP 1 Score: 283 bits (724), Expect = 6.550e-87
Identity = 133/233 (57.08%), Postives = 167/233 (71.67%), Query Frame = 1
Query:    1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPIPKHP 699
            P +  A  GA+G    LRR FSTFGI  ++ATDG   FT  LTQ FL+NW V HRLSSVA PHSNCRAE+ VK VKR+IT N  P+G+LD D+  RAIL YRNTPDP TK SPA  IFGR ++D +P+ PG Y PH TW++ L  RE+A+  RH+   E+W  HTK L  LV GD+V +QN +G HP +W++TG+V E +++DQY+V+VDG+GR T+RNR  LRKF  IP HP
Sbjct:  434 PIIERARDGAKGLIDCLRRTFSTFGIPDDLATDGGPEFTSALTQQFLKNWGVHHRLSSVAYPHSNCRAEVGVKTVKRLITNNTSPNGSLDTDNLQRAILQYRNTPDPKTKLSPAQCIFGRPIKDFIPILPGRYQPHPTWKDTLAAREEALRNRHVRSAERWTEHTKRLPPLVVGDHVRIQNQIGPHPTKWDKTGRVAEVRQFDQYVVRVDGSGRMTIRNRKFLRKF--IPVHP 664          
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: A0A7D9LXV2_PARCT (Translation initiation factor IF-2-like (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LXV2_PARCT)

HSP 1 Score: 269 bits (687), Expect = 1.170e-85
Identity = 121/229 (52.84%), Postives = 162/229 (70.74%), Query Frame = 1
Query:    1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPI 687
            P +  A++G++G    LRR F+TFGI  E A+DG   FT   T+ FLQ W V HRLSSVA PHSNCRAE+ VK +KR+ T N   +G L+ ++  RAIL YRNTP+P TK SPA  IFGR +RD +P+ PG Y PH TWR+ L  RE+A+  RH+   E+W  HT+ L  L+ GD+V +QN  G HP +W++TG V+E +++DQY+++VDG+GRTTLRNR  LRK+QP+
Sbjct:   15 PIIERAQEGSKGLINCLRRTFTTFGIPDECASDGGPEFTAAATRQFLQEWGVHHRLSSVAYPHSNCRAEVGVKTIKRLFTNNTSANGDLNTNALQRAILQYRNTPEPDTKLSPAQCIFGRPIRDFIPILPGRYRPHPTWRDTLAAREEALRNRHMRAAERWTEHTRRLPPLIVGDHVRIQNQTGTHPTKWDKTGLVIEVRQFDQYIIRVDGSGRTTLRNRKFLRKYQPV 243          
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: A0A8B6CHG7_MYTGA (Integrase catalytic domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6CHG7_MYTGA)

HSP 1 Score: 267 bits (682), Expect = 3.700e-85
Identity = 122/233 (52.36%), Postives = 167/233 (71.67%), Query Frame = 1
Query:    1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPIPKHP 699
            P +  A  GA+G    LRR F T+GI  E+++DG   FT   T+ FL+ W V HRLSSVA PHSNCRAE+ VK VKR+IT+N GP+G L+ DS  RAIL YRNTPD  T+ SPAM +FGR +RD +P+ PG Y PH+TWR+ L  RE+A+  RH+   E+   HTK L  L  GD+V +QN +G +P +W++TG+V+E +++DQY+++VDG+GR TLRNR  +RK++P+ K+P
Sbjct:   26 PIIERAHNGAQGLIDCLRRTFVTYGIPDELSSDGGPEFTASTTRQFLKVWGVHHRLSSVAFPHSNCRAEVGVKTVKRLITDNTGPNGELETDSLQRAILQYRNTPDRETRLSPAMCVFGRPIRDFIPILPGRYKPHDTWRDTLSKREEALRHRHMKVAEKLSEHTKQLPPLTIGDHVRIQNQIGANPLKWDKTGQVIEVRQFDQYVIRVDGSGRVTLRNRKFIRKYEPVNKYP 258          
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: A0A6S7H2S1_PARCT (Uncharacterized protein LOC110465399 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H2S1_PARCT)

HSP 1 Score: 262 bits (670), Expect = 5.320e-83
Identity = 127/236 (53.81%), Postives = 161/236 (68.22%), Query Frame = 1
Query:    1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPI----PKH 696
            P +   + GA G    LRR+F TFGI  E+ATDG   FT   TQ FL +W V HRLSSVA PHSNCRAE+ VK VKR+IT N GP+GTLD D+   AIL YRNTPD  TK SPA  IFGR ++D +P++PG Y PH TW++ L  REQA+  RH+   E    HT+ L  L  GD V +QN +G HP++W++TG V+E +++DQY ++VDG+GR TLRNR  LRKF P+    P+H
Sbjct:   46 PIIERCKDGATGLIHCLRRIFVTFGIPDELATDGGPEFTATSTQDFLTSWGVHHRLSSVACPHSNCRAEVGVKTVKRLITNNTGPNGTLDTDTLQIAILQYRNTPDSTTKLSPAECIFGRPIKDFIPIAPGRYQPHPTWKDTLMTREQALRNRHMRTTEWLSEHTRRLPPLKVGDQVRIQNQIGPHPKKWDKTGLVIEVRQFDQYAIRVDGSGRVTLRNRKFLRKFIPVQQRQPRH 281          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001939624B2.380e-9558.80uncharacterized protein LOC120346556 n=1 Tax=Styel... [more]
A0A6J8BAZ8_MYTCO6.510e-9358.08Integrase catalytic domain-containing protein n=1 ... [more]
A0A8B6HT33_MYTGA1.820e-9258.08Integrase catalytic domain-containing protein (Fra... [more]
UPI000719C6F03.890e-9056.28uncharacterized protein LOC106812695 n=1 Tax=Priap... [more]
A0A7D9JJU7_PARCT1.300e-8956.65Uncharacterized protein K02A2.6-like n=1 Tax=Param... [more]
UPI000B45EB1F8.120e-8854.55uncharacterized protein LOC110463445 n=1 Tax=Mizuh... [more]
A0A6S7H3A3_PARCT6.550e-8757.08Transposon Ty3-I Gag-Pol poly n=1 Tax=Paramuricea ... [more]
A0A7D9LXV2_PARCT1.170e-8552.84Translation initiation factor IF-2-like (Fragment)... [more]
A0A8B6CHG7_MYTGA3.700e-8552.36Integrase catalytic domain-containing protein n=1 ... [more]
A0A6S7H2S1_PARCT5.320e-8353.81Uncharacterized protein LOC110465399 n=2 Tax=Param... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig106502contigF-distichus_contig106502:808..1629 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score246.1
Seed ortholog evalue1.8e-62
Seed eggNOG ortholog7668.SPU_005880-tr
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3A9JY@33154,3BUDS@33208,3DI1M@33213,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Exons1
Model size822
Cds size810
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928992.4112775-CDS-F-distichus_contig106502:807..16171622928992.4112775-CDS-F-distichus_contig106502:807..1617Fucus distichus monoicousCDSF-distichus_contig106502 808..1617 -
1690885096.1864948-CDS-F-distichus_contig106502:807..16171690885096.1864948-CDS-F-distichus_contig106502:807..1617Fucus distichus monoicousCDSF-distichus_contig106502 808..1617 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928992.424064-UTR-F-distichus_contig106502:1617..16291622928992.424064-UTR-F-distichus_contig106502:1617..1629Fucus distichus monoicousUTRF-distichus_contig106502 1618..1629 -
1690885096.1960902-UTR-F-distichus_contig106502:1617..16291690885096.1960902-UTR-F-distichus_contig106502:1617..1629Fucus distichus monoicousUTRF-distichus_contig106502 1618..1629 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig106502.555.1prot_F-distichus_contig106502.555.1Fucus distichus monoicouspolypeptideF-distichus_contig106502 808..1617 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig106502.555.1

>prot_F-distichus_contig106502.555.1 ID=prot_F-distichus_contig106502.555.1|Name=mRNA_F-distichus_contig106502.555.1|organism=Fucus distichus monoicous|type=polypeptide|length=270bp
MAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQH
RLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNT
PDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRH
IAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQ
YLVKVDGTGRTTLRNRMHLRKFQPIPKHPRLPAPQPSQPTTLEFPTPASE
SVTFQPPVSPGMLEPAMTVP
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mRNA from alignment at F-distichus_contig106502:808..1629-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig106502.555.1 ID=mRNA_F-distichus_contig106502.555.1|Name=mRNA_F-distichus_contig106502.555.1|organism=Fucus distichus monoicous|type=mRNA|length=822bp|location=Sequence derived from alignment at F-distichus_contig106502:808..1629- (Fucus distichus monoicous)
CCCACGGTGTTCATGGCCGAGCAGGGTGCCAGGGGCTTCACCAAACACCT CAGGAGGATGTTCTCCACCTTTGGGATATGCCAGGAAATTGCGACGGATG GGGCAAGTGTGTTCACAGGAGGTTTGACCCAGACATTCCTGCAGAATTGG GATGTCCAGCACCGCCTCTCCTCTGTTGCAAACCCTCATAGCAACTGCCG GGCTGAACTGGCCGTGAAACAAGTGAAGAGGATAATTACTGAGAACTGTG GACCCTCAGGGACACTGGATGTGGACAGTTTCCACAGAGCCATCCTCTCC TATAGGAACACTCCAGACCCATACACCAAGGGGTCCCCAGCCATGGCTAT CTTTGGGAGGCAGGTACGTGATGGACTGCCTGTATCGCCTGGCCACTACA ACCCCCACAACACCTGGCGTGAATTGCTGGAACACAGGGAGCAGGCCATG GCCAGGAGGCACATCGCAGGCAGGGAGCAGTGGGAGGCCCACACCAAGGA CCTGGTCAAGCTGGTGCAGGGGGACAACGTCTTCCTGCAGAACTTGGTGG GGAACCACCCCAGGCGGTGGGAGCGCACCGGCAAGGTTTTGGAGTGCAAG GAGTACGACCAGTACCTGGTGAAGGTTGACGGTACTGGCAGGACAACCCT GAGGAACAGGATGCACCTCAGGAAGTTCCAACCAATCCCAAAGCATCCTA GACTGCCCGCCCCACAGCCTAGTCAACCCACCACACTGGAGTTCCCTACT CCAGCCTCTGAGTCTGTGACCTTTCAGCCCCCAGTGTCTCCTGGCATGCT AGAGCCAGCCATGACTGTGCCT
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Coding sequence (CDS) from alignment at F-distichus_contig106502:808..1629-

>mRNA_F-distichus_contig106502.555.1 ID=mRNA_F-distichus_contig106502.555.1|Name=mRNA_F-distichus_contig106502.555.1|organism=Fucus distichus monoicous|type=CDS|length=1620bp|location=Sequence derived from alignment at F-distichus_contig106502:808..1629- (Fucus distichus monoicous)
ATGGCCGAGCAGGGTGCCAGGGGCTTCACCAAACACCTCAGGAGGATGTT
CTCCACCTTTGGGATATGCCAGGAAATTGCGACGGATGGGGCAAGTGTGT
TCACAGGAGGTTTGACCCAGACATTCCTGCAGAATTGGGATGTCCAGCAC
CGCCTCTCCTCTGTTGCAAACCCTCATAGCAACTGCCGGGCTGAACTGGC
CGTGAAACAAGTGAAGAGGATAATTACTGAGAACTGTGGACCCTCAGGGA
CACTGGATGTGGACAGTTTCCACAGAGCCATCCTCTCCTATAGGAACACT
CCAGACCCATACACCAAGGGGTCCCCAGCCATGGCTATCTTTGGGAGGCA
GGTACGTGATGGACTGCCTGTATCGCCTGGCCACTACAACCCCCACAACA
CCTGGCGTGAATTGCTGGAACACAGGGAGCAGGCCATGGCCAGGAGGCAC
ATCGCAGGCAGGGAGCAGTGGGAGGCCCACACCAAGGACCTGGTCAAGCT
GGTGCAGGGGGACAACGTCTTCCTGCAGAACTTGGTGGGGAACCACCCCA
GGCGGTGGGAGCGCACCGGCAAGGTTTTGGAGTGCAAGGAGTACGACCAG
TACCTGGTGAAGGTTGACGGTACTGGCAGGACAACCCTGAGGAACAGGAT
GCACCTCAGGAAGTTCCAACCAATCCCAAAGCATCCTAGACTGCCCGCCC
CACAGCCTAGTCAACCCACCACACTGGAGTTCCCTACTCCAGCCTCTGAG
TCTGTGACCTTTCAGCCCCCAGTGTCTCCTGGCATGCTAGAGCCAGCCAT
GACTGTGCCTATGGCCGAGCAGGGTGCCAGGGGCTTCACCAAACACCTCA
GGAGGATGTTCTCCACCTTTGGGATATGCCAGGAAATTGCGACGGATGGG
GCAAGTGTGTTCACAGGAGGTTTGACCCAGACATTCCTGCAGAATTGGGA
TGTCCAGCACCGCCTCTCCTCTGTTGCAAACCCTCATAGCAACTGCCGGG
CTGAACTGGCCGTGAAACAAGTGAAGAGGATAATTACTGAGAACTGTGGA
CCCTCAGGGACACTGGATGTGGACAGTTTCCACAGAGCCATCCTCTCCTA
TAGGAACACTCCAGACCCATACACCAAGGGGTCCCCAGCCATGGCTATCT
TTGGGAGGCAGGTACGTGATGGACTGCCTGTATCGCCTGGCCACTACAAC
CCCCACAACACCTGGCGTGAATTGCTGGAACACAGGGAGCAGGCCATGGC
CAGGAGGCACATCGCAGGCAGGGAGCAGTGGGAGGCCCACACCAAGGACC
TGGTCAAGCTGGTGCAGGGGGACAACGTCTTCCTGCAGAACTTGGTGGGG
AACCACCCCAGGCGGTGGGAGCGCACCGGCAAGGTTTTGGAGTGCAAGGA
GTACGACCAGTACCTGGTGAAGGTTGACGGTACTGGCAGGACAACCCTGA
GGAACAGGATGCACCTCAGGAAGTTCCAACCAATCCCAAAGCATCCTAGA
CTGCCCGCCCCACAGCCTAGTCAACCCACCACACTGGAGTTCCCTACTCC
AGCCTCTGAGTCTGTGACCTTTCAGCCCCCAGTGTCTCCTGGCATGCTAG
AGCCAGCCATGACTGTGCCT
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