mRNA_F-distichus_contig106500.554.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig106500.554.1 vs. uniprot
Match: D7FW02_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW02_ECTSI) HSP 1 Score: 311 bits (798), Expect = 7.250e-102 Identity = 160/182 (87.91%), Postives = 166/182 (91.21%), Query Frame = 1
Query: 22 RPRDALEGDASLPKAIFVPRMEQRLRRLAESSSNTKANRAPFRHLLLHGPPGTGKTLFAKGLSRHSGLDYAIITGGDVAPLGREAVSEMHKLFDWAQASRQACCTFWGRGEGVCGRGVLLFVDEADAFLRRRSTERISEDMRNALNAFLYRTGEQTDRFMVVYASNQPEQFDDAINDRIDEI 567
+P DALEGDASLPKAIFVP+MEQRLRR+AESSSNT+ANRAPFRHLLLHGPPGTGKTLFAKGL+RHSGLDYAIITGGDVAPLGREAVSEMHKLFDWAQASR RGVLLFVDEADAFLRRRSTERISEDMRNALNAFLYRTGEQTDRFMVVYASNQPEQFDDAINDRIDE+
Sbjct: 322 KPGDALEGDASLPKAIFVPQMEQRLRRVAESSSNTRANRAPFRHLLLHGPPGTGKTLFAKGLARHSGLDYAIITGGDVAPLGREAVSEMHKLFDWAQASR---------------RGVLLFVDEADAFLRRRSTERISEDMRNALNAFLYRTGEQTDRFMVVYASNQPEQFDDAINDRIDEM 488
BLAST of mRNA_F-distichus_contig106500.554.1 vs. uniprot
Match: A0A836C9L2_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L2_9STRA) HSP 1 Score: 266 bits (679), Expect = 2.200e-83 Identity = 139/185 (75.14%), Postives = 153/185 (82.70%), Query Frame = 1
Query: 22 RPRDALEGD--ASLPKAIFVPRMEQRLRRLAESSSNTKANRAPFRHLLLHGPPGTGKTLFAKGLSRHSGLDYAIITGGDVAPLGREAVSEMHKLFDWAQASRQACCTFWGRGEGVCGRGVLLFVDEADAFLRRRSTERISEDMRNALNAFLYRTGEQTDRFMVVYASNQPEQFDDAINDRIDEIV 570
R DAL GD P+AIF +E RLRR+AESS+NT+ NRAPFRHLLL+GPPGTGKTLFAKGL++ SG+DYAI+TGGD+APLGREAVSEMHK+FDWAQ SR RGV+LFVDEADAFLRRRSTE ISEDMRNALNAFLYRTGE TDRFMVVYASNQPEQFDDAINDRIDE+V
Sbjct: 266 RAGDALAGDIKGGRPRAIFDKALEARLRRVAESSANTRRNRAPFRHLLLYGPPGTGKTLFAKGLAQASGMDYAIMTGGDIAPLGREAVSEMHKVFDWAQTSR---------------RGVVLFVDEADAFLRRRSTEVISEDMRNALNAFLYRTGEATDRFMVVYASNQPEQFDDAINDRIDELV 435
BLAST of mRNA_F-distichus_contig106500.554.1 vs. uniprot
Match: A0A835YR91_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR91_9STRA) HSP 1 Score: 255 bits (652), Expect = 9.100e-79 Identity = 129/185 (69.73%), Postives = 152/185 (82.16%), Query Frame = 1
Query: 16 FCRPRDALEGDASLPKAIFVPRMEQRLRRLAESSSNTKANRAPFRHLLLHGPPGTGKTLFAKGLSRHSGLDYAIITGGDVAPLGREAVSEMHKLFDWAQASRQACCTFWGRGEGVCGRGVLLFVDEADAFLRRRSTERISEDMRNALNAFLYRTGEQTDRFMVVYASNQPEQFDDAINDRIDEIV 570
F +P +ALEG + P++E RL R+A+S+ NTK N+APFRHLLL+GPPGTGKTLFAKGL+RHSGL+YAI+TGGD+APLGR+AV+EMHKLFDWAQAS +G+LLFVDEADAFLRRRSTERISED+RNALNAFLYRTGE TD+FM+VYASNQPEQFD A+NDRIDE+V
Sbjct: 303 FLKPSNALEG------VVLEPKLETRLSRVAQSTFNTKKNKAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQASN---------------KGLLLFVDEADAFLRRRSTERISEDLRNALNAFLYRTGEATDKFMLVYASNQPEQFDWAVNDRIDEMV 466
BLAST of mRNA_F-distichus_contig106500.554.1 vs. uniprot
Match: A0A7S3HKW4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKW4_9STRA) HSP 1 Score: 239 bits (609), Expect = 6.860e-75 Identity = 119/179 (66.48%), Postives = 144/179 (80.45%), Query Frame = 1
Query: 34 ALEGDASLPKAIFVPRMEQRLRRLAESSSNTKANRAPFRHLLLHGPPGTGKTLFAKGLSRHSGLDYAIITGGDVAPLGREAVSEMHKLFDWAQASRQACCTFWGRGEGVCGRGVLLFVDEADAFLRRRSTERISEDMRNALNAFLYRTGEQTDRFMVVYASNQPEQFDDAINDRIDEIV 570
A +G+ +L + P +E+RL R+A S++NTK NRAPFRHLLLHGPPGTGKT+FAKGL+R GL YAI+TGGDVAPLG++AV+E+HKLFDWA + +GVL+FVDEADAFLR+RSTERISEDMRNALNAFLYRTGE + +FM+VYASNQPEQFD AINDRID++V
Sbjct: 110 AAQGNNALKNVVLDPTLEKRLTRVATSTANTKKNRAPFRHLLLHGPPGTGKTMFAKGLARECGLHYAIMTGGDVAPLGKDAVTEIHKLFDWANTTN---------------KGVLIFVDEADAFLRKRSTERISEDMRNALNAFLYRTGEASYKFMIVYASNQPEQFDWAINDRIDDMV 273
BLAST of mRNA_F-distichus_contig106500.554.1 vs. uniprot
Match: A0A7S1G0B3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G0B3_9STRA) HSP 1 Score: 242 bits (617), Expect = 6.430e-74 Identity = 121/180 (67.22%), Postives = 143/180 (79.44%), Query Frame = 1
Query: 31 DALEGDASLPKAIFVPRMEQRLRRLAESSSNTKANRAPFRHLLLHGPPGTGKTLFAKGLSRHSGLDYAIITGGDVAPLGREAVSEMHKLFDWAQASRQACCTFWGRGEGVCGRGVLLFVDEADAFLRRRSTERISEDMRNALNAFLYRTGEQTDRFMVVYASNQPEQFDDAINDRIDEIV 570
DALEG + P ++QRLR +A S++NTK NRAPFRHLLLHGPPGTGKTLFAKGL+RHSGL+YAI+TGGD+APLGR+AV+E+HKLFDWA+ SR RG+LLFVDEADAFL+ R T +ISED RNALNAFLYRTG +TD+FM+VYASNQP QFD A+ DRIDE+V
Sbjct: 314 DALEG------VVLEPSLDQRLRNVARSTANTKKNRAPFRHLLLHGPPGTGKTLFAKGLARHSGLEYAILTGGDIAPLGRDAVTELHKLFDWAKTSR---------------RGLLLFVDEADAFLQSRETNQISEDQRNALNAFLYRTGTETDKFMMVYASNQPSQFDPAVTDRIDEMV 472
BLAST of mRNA_F-distichus_contig106500.554.1 vs. uniprot
Match: A0A6H5LJ37_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LJ37_9PHAE) HSP 1 Score: 243 bits (619), Expect = 8.470e-74 Identity = 124/180 (68.89%), Postives = 145/180 (80.56%), Query Frame = 1
Query: 31 DALEGDASLPKAIFVPRMEQRLRRLAESSSNTKANRAPFRHLLLHGPPGTGKTLFAKGLSRHSGLDYAIITGGDVAPLGREAVSEMHKLFDWAQASRQACCTFWGRGEGVCGRGVLLFVDEADAFLRRRSTERISEDMRNALNAFLYRTGEQTDRFMVVYASNQPEQFDDAINDRIDEIV 570
DAL G + +E RL R+A+S+ NTK N APFRHLLL+GPPGTGKTLFAKGL+RHSGL+YAI+TGGD+APLGR+AV+EMHK+FDWAQASR +G+LLFVDEADAFLRRR+TE ISED+RNALNAFLYRTGE TD+FM+VYASNQPEQFD A+NDRIDE+V
Sbjct: 322 DALSG------VVLEKSLETRLSRVAQSTFNTKRNSAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKVFDWAQASR---------------KGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMV 480
BLAST of mRNA_F-distichus_contig106500.554.1 vs. uniprot
Match: M4BV23_HYAAE (AAA domain-containing protein n=27 Tax=Peronosporaceae TaxID=4777 RepID=M4BV23_HYAAE) HSP 1 Score: 241 bits (615), Expect = 1.330e-73 Identity = 124/183 (67.76%), Postives = 145/183 (79.23%), Query Frame = 1
Query: 22 RPRDALEGDASLPKAIFVPRMEQRLRRLAESSSNTKANRAPFRHLLLHGPPGTGKTLFAKGLSRHSGLDYAIITGGDVAPLGREAVSEMHKLFDWAQASRQACCTFWGRGEGVCGRGVLLFVDEADAFLRRRSTERISEDMRNALNAFLYRTGEQTDRFMVVYASNQPEQFDDAINDRIDEIV 570
+P DALEG + P++++RLR +A S+ NTK NRAPFRHLLLHGPPGTGKTLFAK L+RHSGL+YAI+TGGDVAPLGRE V+E+HKLFDWA SR RG+LLFVDEADAFL++RS +SEDMRNALNAFLYRTGE +D+FMVV+ASNQPEQFD AINDRIDE+V
Sbjct: 308 KPTDALEG------VVLEPKLDERLRSVAVSTFNTKKNRAPFRHLLLHGPPGTGKTLFAKALARHSGLEYAILTGGDVAPLGREGVTEIHKLFDWASHSR---------------RGLLLFVDEADAFLQKRSNTVMSEDMRNALNAFLYRTGEASDKFMVVFASNQPEQFDWAINDRIDEMV 469
BLAST of mRNA_F-distichus_contig106500.554.1 vs. uniprot
Match: A0A2D4BKB9_PYTIN (ATPase family AAA domain-containing protein 3A n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BKB9_PYTIN) HSP 1 Score: 238 bits (608), Expect = 1.330e-72 Identity = 122/183 (66.67%), Postives = 144/183 (78.69%), Query Frame = 1
Query: 22 RPRDALEGDASLPKAIFVPRMEQRLRRLAESSSNTKANRAPFRHLLLHGPPGTGKTLFAKGLSRHSGLDYAIITGGDVAPLGREAVSEMHKLFDWAQASRQACCTFWGRGEGVCGRGVLLFVDEADAFLRRRSTERISEDMRNALNAFLYRTGEQTDRFMVVYASNQPEQFDDAINDRIDEIV 570
+P DALEG + P++++RLR +A S+ NTK NRAPFRHLLLHGPPGTGKTLFAK L+RHSGL+YAI+TGGDVAPLGRE V+E+HKLFDWA SR RG+LLFVDEADAFL++RS +SEDMRNALNAFLYRTGE +D+FM+V+ASNQPEQFD AINDR DE+V
Sbjct: 303 KPHDALEG------VVLEPKLDERLRSVAVSTFNTKKNRAPFRHLLLHGPPGTGKTLFAKALARHSGLEYAIMTGGDVAPLGREGVTEIHKLFDWATHSR---------------RGLLLFVDEADAFLQKRSNTVMSEDMRNALNAFLYRTGEASDKFMIVFASNQPEQFDWAINDRXDEMV 464
BLAST of mRNA_F-distichus_contig106500.554.1 vs. uniprot
Match: A0A067CUB5_SAPPC (AAA domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CUB5_SAPPC) HSP 1 Score: 238 bits (607), Expect = 1.570e-72 Identity = 122/182 (67.03%), Postives = 143/182 (78.57%), Query Frame = 1
Query: 25 PRDALEGDASLPKAIFVPRMEQRLRRLAESSSNTKANRAPFRHLLLHGPPGTGKTLFAKGLSRHSGLDYAIITGGDVAPLGREAVSEMHKLFDWAQASRQACCTFWGRGEGVCGRGVLLFVDEADAFLRRRSTERISEDMRNALNAFLYRTGEQTDRFMVVYASNQPEQFDDAINDRIDEIV 570
P DALEG + P++++RLR +A S+ NTK NRAPFRHLLLHGPPGTGKTLFAK L+RHSGL+YAI+TGGDVAPLGRE V+E+HKLFDWA S RG+LLFVDEADAFL++RS +SEDMRNALNAFLYRTGE +D+FM+V+ASNQPEQFD AINDRIDE+V
Sbjct: 299 PSDALEG------VVLEPKLDERLRSVAVSTFNTKKNRAPFRHLLLHGPPGTGKTLFAKALARHSGLEYAILTGGDVAPLGREGVTEIHKLFDWASHSN---------------RGLLLFVDEADAFLQKRSNAVMSEDMRNALNAFLYRTGEASDKFMIVFASNQPEQFDWAINDRIDEMV 459
BLAST of mRNA_F-distichus_contig106500.554.1 vs. uniprot
Match: A0A7S2D4S5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D4S5_9STRA) HSP 1 Score: 236 bits (602), Expect = 2.250e-72 Identity = 115/177 (64.97%), Postives = 143/177 (80.79%), Query Frame = 1
Query: 40 EGDASLPKAIFVPRMEQRLRRLAESSSNTKANRAPFRHLLLHGPPGTGKTLFAKGLSRHSGLDYAIITGGDVAPLGREAVSEMHKLFDWAQASRQACCTFWGRGEGVCGRGVLLFVDEADAFLRRRSTERISEDMRNALNAFLYRTGEQTDRFMVVYASNQPEQFDDAINDRIDEIV 570
+ +L + P++ RL R+A S+SNTK N+APFRHLLL+GPPGTGKT+FAKGL+R SGL+YAI+TGGDVAPLGR+AV+E+HK+FDWA S+ +G+LLF+DE+DAFLR+RSTE ISED+RNALNAFLYRTGE TD+FM+VYASNQPEQFD A+NDRIDE+V
Sbjct: 237 DASEALSGVVLEPKLADRLSRVATSTSNTKRNKAPFRHLLLYGPPGTGKTMFAKGLARSSGLEYAILTGGDVAPLGRDAVTEIHKVFDWANTSK---------------KGLLLFIDESDAFLRKRSTENISEDLRNALNAFLYRTGEPTDKFMLVYASNQPEQFDWAVNDRIDEMV 398 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106500.554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig106500.554.1 >prot_F-distichus_contig106500.554.1 ID=prot_F-distichus_contig106500.554.1|Name=mRNA_F-distichus_contig106500.554.1|organism=Fucus distichus monoicous|type=polypeptide|length=192bp MTHQSFCRPRDALEGDASLPKAIFVPRMEQRLRRLAESSSNTKANRAPFRback to top mRNA from alignment at F-distichus_contig106500:343..1804- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig106500.554.1 ID=mRNA_F-distichus_contig106500.554.1|Name=mRNA_F-distichus_contig106500.554.1|organism=Fucus distichus monoicous|type=mRNA|length=1462bp|location=Sequence derived from alignment at F-distichus_contig106500:343..1804- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig106500:343..1804- >mRNA_F-distichus_contig106500.554.1 ID=mRNA_F-distichus_contig106500.554.1|Name=mRNA_F-distichus_contig106500.554.1|organism=Fucus distichus monoicous|type=CDS|length=1152bp|location=Sequence derived from alignment at F-distichus_contig106500:343..1804- (Fucus distichus monoicous)back to top |