mRNA_F-distichus_contig10638.543.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10638.543.1
Unique NamemRNA_F-distichus_contig10638.543.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10638.543.1 vs. uniprot
Match: D7FT89_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT89_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 6.920e-34
Identity = 70/146 (47.95%), Postives = 90/146 (61.64%), Query Frame = 1
Query:   43 APPIFLDKLCSILDRPQLADHISWNEKGDGIIIRQVEQFASEVLPRYFKHSNYQSFVRQLNIYGFHKTSHN----EHSFEFKQPLFRRDQRHLVALIRRKGQSNTFTSAKQREHPVRGCGGDWVPDAGDETKETMARVYGELRRLC 468
            AP  FL+KL +IL+ P L+ HI+WN+ GDGI++    QFA  VLP+Y+KH+NYQSFVRQLNIYGFHKT H+    E S EF+   FR+ QRHL+ LIRRK  S +                     A  ETK ++ R+  ELR +C
Sbjct:   80 APASFLNKLWNILNEPHLSKHITWNQDGDGIVVNHPAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDDDGDEESCEFQHQNFRKGQRHLLGLIRRKAHSTSV--------------------AAQETKGSVDRIAVELRAMC 205          
BLAST of mRNA_F-distichus_contig10638.543.1 vs. uniprot
Match: A0A6H5J8S6_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8S6_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 2.080e-33
Identity = 76/165 (46.06%), Postives = 95/165 (57.58%), Query Frame = 1
Query:   43 APPIFLDKLCSILDRPQLADHISWNEKGDGIIIRQVEQFASEVLPRYFKHSNYQSFVRQLNIYGFHKTSHN----EHSFEFKQPLFRRDQRHLVALIRRKGQSNTFTSAKQREHPVRGCGGDWV--------PDAG-----------DETKETMARVYGELRRLC 468
            AP  FLDKL +IL+ P L+ HI+WN+ GDGI+I    QFA  VLP+Y+KH+NYQSFVRQLNIYGFHKT H+    E S EFK   FR+ QRHL+ LIRRKG S + ++                        P AG            ETK ++ R+  ELR +C
Sbjct:   80 APASFLDKLWNILNEPHLSKHITWNKDGDGILINYPAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDDDGDEDSCEFKHQNFRKGQRHLLGLIRRKGHSMSASNXXXXXXXXXXXXXXXXXXXXXXGSPSAGIRHHDSHSVTAQETKGSVDRIAVELRAMC 244          
BLAST of mRNA_F-distichus_contig10638.543.1 vs. uniprot
Match: A0A7S2RBU5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBU5_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.550e-27
Identity = 59/136 (43.38%), Postives = 91/136 (66.91%), Query Frame = 1
Query:   49 PIFLDKLCSILDRPQLADHISWNEKGDGIIIRQVEQFASEVLPRYFKHSNYQSFVRQLNIYGFHKTSHNEHSFEFKQPLFRRDQRHLVALIRRKGQSNTFTSAKQREHPVRGCGGDWVPDAGDETKETMARVYGEL 456
            P FL+KL  IL+ PQ  + I W++ G  ++I+QV++F+S+VLP+YFKHSN+QSF+RQLN+Y F KT H+ +  EF+QP F++++R L+ LI+RK  +++   AKQ    +     D V D  D+ K+ +    G L
Sbjct:  158 PAFLEKLYDILEDPQYQELICWHDNGRSLLIKQVDEFSSQVLPKYFKHSNFQSFIRQLNMYAFSKTKHDPNWREFRQPNFQQNKRGLLRLIKRKS-ADSNALAKQTRSKME----DMVADL-DKLKQDVNNAKGRL 287          
BLAST of mRNA_F-distichus_contig10638.543.1 vs. uniprot
Match: A0BSV8_PARTE (HSF_DOMAIN domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0BSV8_PARTE)

HSP 1 Score: 105 bits (261), Expect = 1.080e-24
Identity = 55/141 (39.01%), Postives = 79/141 (56.03%), Query Frame = 1
Query:   49 PIFLDKLCSILDRPQLADHISWNEKGDGIIIRQVEQFASEVLPRYFKHSNYQSFVRQLNIYGFHKTSHNEHSFEFKQPLFRRDQRHLVALIRRK-GQSNTFTSAKQREHPVRGCGGDWVPDAGDETKETMARVYGELRRLC 468
            P FL K   IL+ PQL D + WNE G G +++ V  F  +VLP YFKH N+ SFVRQ+N+YGFHK+  ++   EF  P F++DQR+L+  I+RK G+      A     P R        +  D+  + +     EL ++C
Sbjct:   11 PAFLQKTYDILENPQLQDIVGWNEDGSGFLVKNVIAFQDQVLPMYFKHRNFASFVRQMNMYGFHKSRSDQKENEFIHPHFKKDQRNLLKKIKRKSGEQGDDQFAIMELKPHRN------QNISDKQIQQIITKQQELEKVC 145          
BLAST of mRNA_F-distichus_contig10638.543.1 vs. uniprot
Match: A0EEF5_PARTE (HSF_DOMAIN domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0EEF5_PARTE)

HSP 1 Score: 107 bits (266), Expect = 1.230e-24
Identity = 48/94 (51.06%), Postives = 68/94 (72.34%), Query Frame = 1
Query:   49 PIFLDKLCSILDRPQLADHISWNEKGDGIIIRQVEQFASEVLPRYFKHSNYQSFVRQLNIYGFHKTSHNEHSFEFKQPLFRRDQRHLVALIRRK 330
            P FL K   I+D PQ  D ISWNE+G   I+++V +F+  +LP+ FKH+N+ SFVRQLN+Y FHKT H+ +  EFK  LF+R ++HL++ I+RK
Sbjct:   27 PAFLLKTYEIIDNPQNKDIISWNEEGSAFIVKKVNEFSDIILPKSFKHNNFASFVRQLNMYDFHKTRHDNNENEFKHKLFQRSKKHLLSQIKRK 120          
BLAST of mRNA_F-distichus_contig10638.543.1 vs. uniprot
Match: A0BZL0_PARTE (HSF_DOMAIN domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0BZL0_PARTE)

HSP 1 Score: 104 bits (259), Expect = 2.140e-24
Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 1
Query:   49 PIFLDKLCSILDRPQLADHISWNEKGDGIIIRQVEQFASEVLPRYFKHSNYQSFVRQLNIYGFHKTSHNEHSFEFKQPLFRRDQRHLVALIRRKGQSN---TFTSAKQREHPVRGCGGDWVPDAGDETKETMARVYGELRRLC 468
            P FL K   IL+  QL D + WNE G G +++ V  F  +VLP YFKH N+ SFVRQ+N+YGFHK+  ++   EF  P F+RDQR+L+  I+RK   +    FT  + + H  +        +  D+  + +     EL ++C
Sbjct:   11 PAFLQKTYDILENSQLQDIVGWNEDGSGFLVKNVIAFQDQVLPMYFKHRNFASFVRQMNMYGFHKSRSDQKENEFIHPHFKRDQRNLLKKIKRKSGEHGDDQFTIMELKPHRNQ--------NISDKQIQQIMTKQSELEKVC 145          
BLAST of mRNA_F-distichus_contig10638.543.1 vs. uniprot
Match: A0A7S2G5V1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G5V1_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.680e-24
Identity = 52/106 (49.06%), Postives = 76/106 (71.70%), Query Frame = 1
Query:   46 PPIFLDKLCSILDRPQLADHISWNEKGDGIIIRQVEQFASEVLPRYFKHSNYQSFVRQLNIYGFHKTSHNEHSFEFKQPLFRRDQRHLVALIRRKGQSNTFTSAKQ 363
            P  FL+KL  IL+    ++HI W+ +G  I+I++V+ FA  VLP++FKHSN+QSFVRQLN+Y F KT H+ +  EF+QP F+R +R+++  I+RK  S+T   AKQ
Sbjct:   93 PAAFLEKLYDILEDTIYSEHICWSMEGQSILIKKVDSFAKSVLPKFFKHSNFQSFVRQLNMYAFSKTRHDPNWREFRQPNFQRGKRNMLKFIKRKT-SDTSAMAKQ 197          
BLAST of mRNA_F-distichus_contig10638.543.1 vs. uniprot
Match: A0EEY8_PARTE (HSF_DOMAIN domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0EEY8_PARTE)

HSP 1 Score: 105 bits (262), Expect = 4.630e-24
Identity = 48/94 (51.06%), Postives = 67/94 (71.28%), Query Frame = 1
Query:   49 PIFLDKLCSILDRPQLADHISWNEKGDGIIIRQVEQFASEVLPRYFKHSNYQSFVRQLNIYGFHKTSHNEHSFEFKQPLFRRDQRHLVALIRRK 330
            P FL K   I+D PQ  D I WNE+G   I+++V +F+  +LP+ FKHSN+ SFVRQLN+Y FHKT H+ +  EFK  LF+R ++HL++ I+RK
Sbjct:   27 PAFLLKTYEIIDNPQNHDIIGWNEEGTAFIVKKVNEFSDIILPKSFKHSNFASFVRQLNMYDFHKTRHDNNENEFKHKLFQRGKKHLLSQIKRK 120          
BLAST of mRNA_F-distichus_contig10638.543.1 vs. uniprot
Match: M4BAP6_HYAAE (HSF_DOMAIN domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BAP6_HYAAE)

HSP 1 Score: 106 bits (265), Expect = 5.390e-24
Identity = 59/138 (42.75%), Postives = 80/138 (57.97%), Query Frame = 1
Query:   49 PIFLDKLCSILDRPQLADHISWNEKGDGIIIRQVEQFASEVLPRYFKHSNYQSFVRQLNIYGFHKTSHNEHSFEFKQPLFRRDQRHLVALIRRKGQSNTFTSAKQREHPVRGCGGDWVPDAGDETKETMARVYGELRR 462
            P FL K   I   P+ A    WN  GD II+ Q+E F + VLPR+FKH N+ SFVRQLN+YGFHKT  +    EF+ P F+R +  L+ LI+RK  S++  S+   +H V     +   DA  E  +T+ R   ELR+
Sbjct:   55 PAFLSKTYEIFSMPEFAHVCGWNATGDTIIVAQLETFVAMVLPRFFKHRNFPSFVRQLNLYGFHKTVLDSKRLEFQHPYFKRGRPDLLHLIKRKVSSSS--SSHHNQHIVSTSIQNSRLDAHREISDTLLREMKELRQ 190          
BLAST of mRNA_F-distichus_contig10638.543.1 vs. uniprot
Match: A0A8K1FLI2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLI2_PYTOL)

HSP 1 Score: 105 bits (263), Expect = 1.460e-23
Identity = 57/139 (41.01%), Postives = 77/139 (55.40%), Query Frame = 1
Query:   49 PIFLDKLCSILDRPQLADHISWNEKGDGIIIRQVEQFASEVLPRYFKHSNYQSFVRQLNIYGFHKTSHNEHSFEFKQPLFRRDQRHLVALIRRKGQSNTFTSAKQREHPVRGCGGDWVPDAGDETKETMARVYGELRRL 465
            P FL K   I   P+ A    WN  GD II+ Q+E F + VLPR+FKH N+ SFVRQLN+YGFHKT  +    EF+ P F+RD+  L+ +I+RK  S + T+ +Q +        +       E KE   R  G  +RL
Sbjct:  118 PAFLSKTFEIFSMPEFATICGWNASGDTIIVSQLEAFVAMVLPRFFKHRNFPSFVRQLNLYGFHKTVLDSKRLEFQHPYFKRDRPDLLHMIKRKVSSGSTTTQQQSQTTRLEVHREISDQLLKEMKELRQRSDGMEKRL 256          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10638.543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT89_ECTSI6.920e-3447.95Heat Shock transcription factor n=1 Tax=Ectocarpus... [more]
A0A6H5J8S6_9PHAE2.080e-3346.06HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
A0A7S2RBU5_9STRA7.550e-2743.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0BSV8_PARTE1.080e-2439.01HSF_DOMAIN domain-containing protein n=1 Tax=Param... [more]
A0EEF5_PARTE1.230e-2451.06HSF_DOMAIN domain-containing protein n=1 Tax=Param... [more]
A0BZL0_PARTE2.140e-2437.76HSF_DOMAIN domain-containing protein n=1 Tax=Param... [more]
A0A7S2G5V1_9STRA2.680e-2449.06Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0EEY8_PARTE4.630e-2451.06HSF_DOMAIN domain-containing protein n=1 Tax=Param... [more]
M4BAP6_HYAAE5.390e-2442.75HSF_DOMAIN domain-containing protein n=1 Tax=Hyalo... [more]
A0A8K1FLI2_PYTOL1.460e-2341.01Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10638contigF-distichus_contig10638:2639..4206 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score107.5
Seed ortholog evalue5.9e-21
Seed eggNOG ortholog272952.HpaP803356
Preferred nameHSF4
KEGG koko:K09414,ko:K09415,ko:K09416,ko:K09417
KEGG Pathwayko04212,ko05134,map04212,map05134
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000165,GO:0000228,GO:0000280,GO:0000302,GO:0000775,GO:0000776,GO:0000785,GO:0000790,GO:0000791,GO:0000792,GO:0000922,GO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001046,GO:0001047,GO:0001067,GO:0001078,GO:0001101,GO:0001161,GO:0001162,GO:0001227,GO:0001228,GO:0001654,GO:0001701,GO:0001817,GO:0001818,GO:0001890,GO:0001892,GO:0001932,GO:0001934,GO:0002119,GO:0002164,GO:0002237,GO:0002376,GO:0002673,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003697,GO:0003700,GO:0003712,GO:0003713,GO:0003714,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006282,GO:0006325,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006468,GO:0006482,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0006979,GO:0006986,GO:0006996,GO:0007049,GO:0007143,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007292,GO:0007346,GO:0007423,GO:0007565,GO:0007568,GO:0007600,GO:0007601,GO:0008150,GO:0008152,GO:0008214,GO:0008284,GO:0008285,GO:0008340,GO:0009058,GO:0009059,GO:0009266,GO:0009299,GO:0009314,GO:0009408,GO:0009416,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009628,GO:0009635,GO:0009636,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010212,GO:0010243,GO:0010259,GO:0010332,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010656,GO:0010660,GO:0010662,GO:0010664,GO:0010665,GO:0010667,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0014070,GO:0015630,GO:0016043,GO:0016070,GO:0016071,GO:0016310,GO:0016569,GO:0016570,GO:0016577,GO:0016604,GO:0016605,GO:0016607,GO:0017085,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0019902,GO:0019903,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0030162,GO:0031072,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031347,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031440,GO:0031442,GO:0031490,GO:0031620,GO:0031647,GO:0031650,GO:0031974,GO:0031981,GO:0032092,GO:0032101,GO:0032268,GO:0032269,GO:0032270,GO:0032355,GO:0032496,GO:0032501,GO:0032502,GO:0032504,GO:0032680,GO:0032720,GO:0032774,GO:0032870,GO:0032991,GO:0033169,GO:0033554,GO:0033574,GO:0033993,GO:0034599,GO:0034605,GO:0034614,GO:0034620,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0035690,GO:0035770,GO:0035966,GO:0035967,GO:0036003,GO:0036211,GO:0040008,GO:0040014,GO:0040018,GO:0040024,GO:0042127,GO:0042221,GO:0042325,GO:0042327,GO:0042493,GO:0042509,GO:0042531,GO:0042542,GO:0042742,GO:0042802,GO:0042803,GO:0042981,GO:0043009,GO:0043010,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043170,GO:0043200,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043280,GO:0043281,GO:0043388,GO:0043393,GO:0043412,GO:0043434,GO:0043497,GO:0043565,GO:0043618,GO:0043620,GO:0043621,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044212,GO:0044213,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044706,GO:0045087,GO:0045120,GO:0045595,GO:0045597,GO:0045738,GO:0045787,GO:0045862,GO:0045892,GO:0045893,GO:0045927,GO:0045931,GO:0045934,GO:0045935,GO:0045937,GO:0045944,GO:0046425,GO:0046427,GO:0046483,GO:0046677,GO:0046685,GO:0046686,GO:0046688,GO:0046982,GO:0046983,GO:0048232,GO:0048285,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048568,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048731,GO:0048856,GO:0048869,GO:0050684,GO:0050685,GO:0050727,GO:0050730,GO:0050731,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050821,GO:0050829,GO:0050832,GO:0050877,GO:0050896,GO:0050953,GO:0051052,GO:0051053,GO:0051054,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051259,GO:0051260,GO:0051276,GO:0051321,GO:0051336,GO:0051345,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051879,GO:0052547,GO:0052548,GO:0060136,GO:0060255,GO:0060548,GO:0061408,GO:0061458,GO:0061770,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070076,GO:0070206,GO:0070207,GO:0070301,GO:0070887,GO:0070988,GO:0071214,GO:0071229,GO:0071230,GO:0071236,GO:0071241,GO:0071243,GO:0071248,GO:0071276,GO:0071280,GO:0071310,GO:0071375,GO:0071392,GO:0071396,GO:0071407,GO:0071417,GO:0071478,GO:0071479,GO:0071480,GO:0071495,GO:0071704,GO:0071840,GO:0072686,GO:0072737,GO:0072738,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090083,GO:0090084,GO:0090261,GO:0090304,GO:0097159,GO:0097165,GO:0097237,GO:0097327,GO:0097431,GO:0097659,GO:0097677,GO:0098542,GO:0098687,GO:0098847,GO:0104004,GO:0140013,GO:0140110,GO:1900034,GO:1900117,GO:1900119,GO:1900363,GO:1900365,GO:1901214,GO:1901215,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901652,GO:1901653,GO:1901654,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1902074,GO:1902075,GO:1902510,GO:1902512,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1902749,GO:1902751,GO:1902806,GO:1902808,GO:1903046,GO:1903311,GO:1903313,GO:1903320,GO:1903321,GO:1903506,GO:1903507,GO:1903508,GO:1903555,GO:1903556,GO:1903624,GO:1903626,GO:1903935,GO:1903936,GO:1904385,GO:1904526,GO:1904528,GO:1904892,GO:1904894,GO:1990776,GO:1990837,GO:1990841,GO:1990904,GO:2000112,GO:2000113,GO:2000116,GO:2000779,GO:2000780,GO:2001020,GO:2001021,GO:2001032,GO:2001033,GO:2001056,GO:2001141
EggNOG free text desc.heat shock factor
EggNOG OGs3Q91H@4776,COG5169@1,KOG0627@2759
Ec32 ortholog descriptionHeat shock transcription factor
Ec32 orthologEc-06_003680.1
COG Functional cat.K
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03000
Exons4
Model size469
Cds size468
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10638.543.1prot_F-distichus_contig10638.543.1Fucus distichus monoicouspolypeptideF-distichus_contig10638 2639..4205 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928991.2475667-CDS-F-distichus_contig10638:2638..27581622928991.2475667-CDS-F-distichus_contig10638:2638..2758Fucus distichus monoicousCDSF-distichus_contig10638 2639..2758 +
1690885095.1850672-CDS-F-distichus_contig10638:2638..27581690885095.1850672-CDS-F-distichus_contig10638:2638..2758Fucus distichus monoicousCDSF-distichus_contig10638 2639..2758 +
1622928991.273793-CDS-F-distichus_contig10638:3166..32651622928991.273793-CDS-F-distichus_contig10638:3166..3265Fucus distichus monoicousCDSF-distichus_contig10638 3167..3265 +
1690885095.2037332-CDS-F-distichus_contig10638:3166..32651690885095.2037332-CDS-F-distichus_contig10638:3166..3265Fucus distichus monoicousCDSF-distichus_contig10638 3167..3265 +
1622928991.290118-CDS-F-distichus_contig10638:3647..38331622928991.290118-CDS-F-distichus_contig10638:3647..3833Fucus distichus monoicousCDSF-distichus_contig10638 3648..3833 +
1690885095.2166643-CDS-F-distichus_contig10638:3647..38331690885095.2166643-CDS-F-distichus_contig10638:3647..3833Fucus distichus monoicousCDSF-distichus_contig10638 3648..3833 +
1622928991.3060842-CDS-F-distichus_contig10638:4142..42051622928991.3060842-CDS-F-distichus_contig10638:4142..4205Fucus distichus monoicousCDSF-distichus_contig10638 4143..4205 +
1690885095.2360175-CDS-F-distichus_contig10638:4142..42051690885095.2360175-CDS-F-distichus_contig10638:4142..4205Fucus distichus monoicousCDSF-distichus_contig10638 4143..4205 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10638.543.1

>prot_F-distichus_contig10638.543.1 ID=prot_F-distichus_contig10638.543.1|Name=mRNA_F-distichus_contig10638.543.1|organism=Fucus distichus monoicous|type=polypeptide|length=156bp
AGAAGKRGKRGEMGAPPIFLDKLCSILDRPQLADHISWNEKGDGIIIRQV
EQFASEVLPRYFKHSNYQSFVRQLNIYGFHKTSHNEHSFEFKQPLFRRDQ
RHLVALIRRKGQSNTFTSAKQREHPVRGCGGDWVPDAGDETKETMARVYG
ELRRLC
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mRNA from alignment at F-distichus_contig10638:2639..4206+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10638.543.1 ID=mRNA_F-distichus_contig10638.543.1|Name=mRNA_F-distichus_contig10638.543.1|organism=Fucus distichus monoicous|type=mRNA|length=1568bp|location=Sequence derived from alignment at F-distichus_contig10638:2639..4206+ (Fucus distichus monoicous)
GCAGGCGCAGCTGGCAAACGGGGCAAGCGCGGGGAGATGGGAGCACCGCC AATTTTTCTGGACAAGCTCTGCAGCATCCTCGACCGGCCGCAACTCGCGG ATCATATTTCGTGGAACGAGGTGCGGTCCGGTCTAGTAAACAGTACTAGT ACGTCAGAACATAATATAACATAATGTTTTAGTACAGTCCACCAGTACTG TTTGGGTCTCTAGTACTCTAGTACTCCACTATTTATAGTAGTATAGTTAC AGTAGTCACAGCGCAAAAAAGAAAGCCGATTGGGCGTGGAAGACGTCCAA CGCTCGGCTTGGTCGCTTAGAGGGCTCTGCAGTTCGGACCCTGGTCCAAA ACGTAGGAAATATTGATGATCGAGGAAGATAGTGTGTGAATGTACTGGGG GTGGGGGGTGGGGATGGTGGTAGACGTTGAGGATCGACCCCCCCCTCCCC CGCAAGTTGTAGCCAGGGCTCTGGTGAGACGTACCCCGACGAAAATGCGC GCCATTTCATCGCTCCATCCAAACGCAGAAAGGGGACGGAATCATCATCC GGCAGGTGGAGCAGTTCGCGTCGGAAGTGCTGCCTCGGTACTTCAAACAC AGCAACTACCAGAGCTTCGTGCGGCAGGTTATACTACTTGTACACTAGAG GGGTCGTAGTGCAACACCATTATTTTTTCTAACACACTATCCGAGCGCTT TCGGCAGCCGACTGGATTACTGACGGGGGTGAGGGGAATACTAACCAATG ATATGCTCACGTACAGTTTATCCGTGCTCTCGACACGTAGAACGTACTTG TAGGCCTGCCTGGCAAGGTTTCTGGAGATAAATCATCGTTCATAACGCTG GGGGGTCTCTACCAACAGTATCGTACAGCACAATACAAACGCTTGAGTTA ATTATGTTTTCTTCTTCAGGGTGCAGTACCCTCAAGGCTCTAGGCGCCTC TCTGCCAGTCCCAGTAACTCTTCCAGGTCACTCCGTGTTGACCTTGCATT CCGGCGCAGCTAAATATTTACGGCTTCCACAAGACGAGCCACAACGAGCA CAGCTTCGAGTTCAAGCAGCCTCTCTTCCGCCGCGACCAACGACATCTGG TGGCGCTCATCCGGCGCAAGGGGCAGAGTAACACCTTCACTTCGGCCAAG CAACGCGAGCATCCCGTGCGCGGCTGTGGTGGCGATTGGGTTCCAGTTGC GCTTGGGTCTAGGTGGTAGTCCGAGAGGCGTTTCGCTTGGTCTGTGAAGG ATGCCACGCAGCGGTCTCCGATTTCGCGAGGCATCCCTTTCTGTTGGTCA GGCGTTTTTGTGTTTCCGCGGAGCTACCCCAAACCGCCGCAGTCTTTTTG GGTGTCTCCCCATGGCATGTGTACGTGTGCCTCATTTGAGGCGCATAACT TTGCCCCCCCCCGTCGCGCACCCTTTGCTTTGAATGCAAAAAAAAGGTCG AAATATCATATGAGCATCAAACATCATTTTTTTTGTAAAATATTAATCAT TCAGGACGCGGGAGACGAGACGAAGGAAACCATGGCGCGCGTGTACGGAG AACTGAGGCGTTTGTGCA
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Coding sequence (CDS) from alignment at F-distichus_contig10638:2639..4206+

>mRNA_F-distichus_contig10638.543.1 ID=mRNA_F-distichus_contig10638.543.1|Name=mRNA_F-distichus_contig10638.543.1|organism=Fucus distichus monoicous|type=CDS|length=936bp|location=Sequence derived from alignment at F-distichus_contig10638:2639..4206+ (Fucus distichus monoicous)
GCAGGCGCAGCTGGCAAACGGGGCAAGCGCGGGGAGATGGGAGCACCGCC
AATTTTTCTGGACAAGCTCTGCAGCATCCTCGACCGGCCGCAACTCGCGG
ATCATATTTCGTGGAACGAGGCAGGCGCAGCTGGCAAACGGGGCAAGCGC
GGGGAGATGGGAGCACCGCCAATTTTTCTGGACAAGCTCTGCAGCATCCT
CGACCGGCCGCAACTCGCGGATCATATTTCGTGGAACGAGAAAGGGGACG
GAATCATCATCCGGCAGGTGGAGCAGTTCGCGTCGGAAGTGCTGCCTCGG
TACTTCAAACACAGCAACTACCAGAGCTTCGTGCGGCAGAAAGGGGACGG
AATCATCATCCGGCAGGTGGAGCAGTTCGCGTCGGAAGTGCTGCCTCGGT
ACTTCAAACACAGCAACTACCAGAGCTTCGTGCGGCAGCTAAATATTTAC
GGCTTCCACAAGACGAGCCACAACGAGCACAGCTTCGAGTTCAAGCAGCC
TCTCTTCCGCCGCGACCAACGACATCTGGTGGCGCTCATCCGGCGCAAGG
GGCAGAGTAACACCTTCACTTCGGCCAAGCAACGCGAGCATCCCGTGCGC
GGCTGTGGTGGCGATTGGGTTCCACTAAATATTTACGGCTTCCACAAGAC
GAGCCACAACGAGCACAGCTTCGAGTTCAAGCAGCCTCTCTTCCGCCGCG
ACCAACGACATCTGGTGGCGCTCATCCGGCGCAAGGGGCAGAGTAACACC
TTCACTTCGGCCAAGCAACGCGAGCATCCCGTGCGCGGCTGTGGTGGCGA
TTGGGTTCCAGACGCGGGAGACGAGACGAAGGAAACCATGGCGCGCGTGT
ACGGAGAACTGAGGCGTTTGTGCGACGCGGGAGACGAGACGAAGGAAACC
ATGGCGCGCGTGTACGGAGAACTGAGGCGTTTGTGC
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