mRNA_F-distichus_contig106212.528.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig106212.528.1 vs. uniprot
Match: D7G614_ECTSI (Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G614_ECTSI) HSP 1 Score: 243 bits (620), Expect = 1.940e-79 Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 1
Query: 1 VEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSALLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGGSKTMSRPFGVALLMAGYDDRGAQVRWQD 399
VEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTS LLEPSSVEKIMEVD+HIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGGSKTMSRPFGVALLMAG+DDRGAQ+ + D
Sbjct: 24 VEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSPLLEPSSVEKIMEVDSHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGGSKTMSRPFGVALLMAGFDDRGAQLFFSD 156
BLAST of mRNA_F-distichus_contig106212.528.1 vs. uniprot
Match: A0A6V1KK02_HETAK (Proteasome subunit alpha type n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KK02_HETAK) HSP 1 Score: 223 bits (569), Expect = 1.130e-71 Identity = 113/139 (81.29%), Postives = 125/139 (89.93%), Query Frame = 1
Query: 1 VEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSALLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGGSKTMSRPFGVALLMAGYDDRGAQVRWQDAKSASI 417
VEYAIEAIKLGSTAVGI+T EGVVLAVEKRLTS LLEPSSVEKIME+D+HIGAAMSGLIADARTL+DHARVEAQNHRFTYDEP+R+EALTQA+CDLALSFGEGG K MSRPFGVALLMAG DD+G Q+ + + +
Sbjct: 24 VEYAIEAIKLGSTAVGIKTNEGVVLAVEKRLTSPLLEPSSVEKIMEIDSHIGAAMSGLIADARTLIDHARVEAQNHRFTYDEPVRIEALTQAICDLALSFGEGGKEKKMSRPFGVALLMAGCDDKGPQLFFSEPSGTFV 162
BLAST of mRNA_F-distichus_contig106212.528.1 vs. uniprot
Match: A0A835Z048_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z048_9STRA) HSP 1 Score: 222 bits (565), Expect = 4.450e-71 Identity = 115/133 (86.47%), Postives = 122/133 (91.73%), Query Frame = 1
Query: 1 VEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSALLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGGSKTMSRPFGVALLMAGYDDRGAQVRWQD 399
VEYAIEAIKLGSTAVGIQTKEGV+LAVEKRLTS LLEPSSV KIMEVD HI AAMSGLIADARTLVDHARVEAQNH FTYDEPMRVEALTQAVCD+ALSFGE GG K MSRPFGVALL+AG+DD+G Q+ + D
Sbjct: 24 VEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVVKIMEVDKHIAAAMSGLIADARTLVDHARVEAQNHTFTYDEPMRVEALTQAVCDVALSFGEDGGGKKMSRPFGVALLIAGFDDQGPQLFFSD 156
BLAST of mRNA_F-distichus_contig106212.528.1 vs. uniprot
Match: A0A7S2V165_9STRA (Proteasome subunit alpha type n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V165_9STRA) HSP 1 Score: 218 bits (555), Expect = 1.470e-69 Identity = 108/139 (77.70%), Postives = 124/139 (89.21%), Query Frame = 1
Query: 1 VEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSALLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGGSKTMSRPFGVALLMAGYDDRGAQVRWQDAKSASI 417
VEYA+EAIKLGSTAVGIQTK+G++LAVEKRLTS L+EPSS+EKI E+D+HIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMR EALTQA+CD+ALSFGEGG K MSRPFGVALL+AG+D+ G Q+ + D +
Sbjct: 24 VEYALEAIKLGSTAVGIQTKDGIILAVEKRLTSPLMEPSSMEKIFEIDSHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRPEALTQAICDVALSFGEGGKEKKMSRPFGVALLIAGHDESGPQLFFSDPSGTFV 162
BLAST of mRNA_F-distichus_contig106212.528.1 vs. uniprot
Match: A0A4D9D6B9_9STRA (Proteasome subunit alpha type n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6B9_9STRA) HSP 1 Score: 210 bits (534), Expect = 2.270e-66 Identity = 105/133 (78.95%), Postives = 120/133 (90.23%), Query Frame = 1
Query: 1 VEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSALLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGGSKTMSRPFGVALLMAGYDDRGAQVRWQD 399
VEYAIEAIKLGSTAVG+ TK GV+LAVEKR++S LLEP+SVEKIMEVDTHIGAAMSGL+ DARTLVDHARVEAQNHRF+Y+EP+RVEALTQ +CDLAL+F E G K MSRPFGVALL+AGYDD+G Q+ + D
Sbjct: 24 VEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDTHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAEDGDEKKMSRPFGVALLLAGYDDKGPQLFFSD 156
BLAST of mRNA_F-distichus_contig106212.528.1 vs. uniprot
Match: A0A6U3XD30_9STRA (Proteasome subunit alpha type n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U3XD30_9STRA) HSP 1 Score: 206 bits (525), Expect = 6.160e-65 Identity = 112/143 (78.32%), Postives = 120/143 (83.92%), Query Frame = 1
Query: 1 VEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSALLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGGS---KTMSRPFGVALLMAGYDDR-GAQVRWQDAKSASI 417
VEYAIEAIKLGSTAVGIQTK G VLAVEKRLTS LLEPSSVEKI E+DTHIGAAMSGL+ADARTLVDHARVEAQNH FTYDEP+ VEALTQAVCDLALSFGEG K MSRPFGVALL+AGYD+ G Q+ + D +
Sbjct: 24 VEYAIEAIKLGSTAVGIQTKHGCVLAVEKRLTSTLLEPSSVEKIAEIDTHIGAAMSGLVADARTLVDHARVEAQNHTFTYDEPIGVEALTQAVCDLALSFGEGQDGDKDKRMSRPFGVALLLAGYDELDGPQLFFSDPSGTFV 166
BLAST of mRNA_F-distichus_contig106212.528.1 vs. uniprot
Match: A0A6U4HN84_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HN84_9STRA) HSP 1 Score: 205 bits (521), Expect = 1.560e-64 Identity = 102/133 (76.69%), Postives = 118/133 (88.72%), Query Frame = 1
Query: 1 VEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSALLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGGSKTMSRPFGVALLMAGYDDRGAQVRWQD 399
VEYAI+A++LGSTAVGI+T EG VLAVEKRLTS LLEPSSVEKI+EVD+HIGAA+SGLI+DARTL+DHARVEAQNHRFT++EPMRVEALTQ+ CDLAL FGE G MSRPFG ALL+ GYDD+G Q+ + D
Sbjct: 14 VEYAIKAVQLGSTAVGIKTSEGTVLAVEKRLTSKLLEPSSVEKILEVDSHIGAAVSGLISDARTLIDHARVEAQNHRFTFNEPMRVEALTQSTCDLALGFGEDGDDNKMSRPFGAALLIGGYDDKGPQLFFTD 146
BLAST of mRNA_F-distichus_contig106212.528.1 vs. uniprot
Match: A0A7S3LEV1_9STRA (Proteasome subunit alpha type (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEV1_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.810e-64 Identity = 109/143 (76.22%), Postives = 121/143 (84.62%), Query Frame = 1
Query: 1 VEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSALLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEG---GGSKTMSRPFGVALLMAGYDDR-GAQVRWQDAKSASI 417
VEYAIEAIKLGSTA+G+QTKEG VLAVEKRLTS LL+PSSVEKI E+D+HIGAAMSGL+ADARTLVDHARVEAQNH FTYDEP+ VEALTQAVCDLALSFGEG K MSRPFGVALL+AGYD+ G Q+ + D +
Sbjct: 35 VEYAIEAIKLGSTAIGLQTKEGCVLAVEKRLTSPLLDPSSVEKIAEIDSHIGAAMSGLVADARTLVDHARVEAQNHTFTYDEPIGVEALTQAVCDLALSFGEGQDGDSKKRMSRPFGVALLLAGYDELDGCQLFFSDPSGTFV 177
BLAST of mRNA_F-distichus_contig106212.528.1 vs. uniprot
Match: F0Y902_AURAN (Proteasome subunit alpha type n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y902_AURAN) HSP 1 Score: 204 bits (519), Expect = 5.500e-64 Identity = 106/139 (76.26%), Postives = 122/139 (87.77%), Query Frame = 1
Query: 1 VEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSALLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGE------GGGSKTMSRPFGVALLMAGYDDRGAQVRWQD 399
VEYAI+A+KLGST++GI+T +GVVLAVEKR+TS L+E SS+EK+ME+D+H GAAMSGLIADARTLVDHARVEAQNHRFTYDEPM ALTQ+VCDLALSFGE GGGSK MSRPFGVALL+AGYDD GAQ+ + D
Sbjct: 24 VEYAIQAVKLGSTSIGIKTADGVVLAVEKRVTSTLMESSSIEKVMEIDSHCGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMPTTALTQSVCDLALSFGEDSEEREGGGSK-MSRPFGVALLVAGYDDDGAQLYYAD 161
BLAST of mRNA_F-distichus_contig106212.528.1 vs. uniprot
Match: A0A7S1U8X7_9STRA (Hypothetical protein (Fragment) n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8X7_9STRA) HSP 1 Score: 201 bits (511), Expect = 5.640e-64 Identity = 101/133 (75.94%), Postives = 117/133 (87.97%), Query Frame = 1
Query: 1 VEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSALLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGGSKTMSRPFGVALLMAGYDDRGAQVRWQD 399
VEYAI+A++LGSTAVGI+T EG VLAVEKRLTS LLEPSSVEKI+EVD+HIGAA+SGLI+DARTL+DHARVEAQNHRFT++EPMRVEALTQ+ CDLAL FGE G MSRPFG ALL+ G DD+G Q+ + D
Sbjct: 14 VEYAIKAVQLGSTAVGIKTSEGTVLAVEKRLTSKLLEPSSVEKILEVDSHIGAAVSGLISDARTLIDHARVEAQNHRFTFNEPMRVEALTQSTCDLALGFGEDGDDNKMSRPFGAALLIGGDDDKGPQLFFTD 146 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106212.528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig106212.528.1 >prot_F-distichus_contig106212.528.1 ID=prot_F-distichus_contig106212.528.1|Name=mRNA_F-distichus_contig106212.528.1|organism=Fucus distichus monoicous|type=polypeptide|length=139bp VEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSALLEPSSVEKIMEVDTHback to top mRNA from alignment at F-distichus_contig106212:38..1719- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig106212.528.1 ID=mRNA_F-distichus_contig106212.528.1|Name=mRNA_F-distichus_contig106212.528.1|organism=Fucus distichus monoicous|type=mRNA|length=1682bp|location=Sequence derived from alignment at F-distichus_contig106212:38..1719- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig106212:38..1719- >mRNA_F-distichus_contig106212.528.1 ID=mRNA_F-distichus_contig106212.528.1|Name=mRNA_F-distichus_contig106212.528.1|organism=Fucus distichus monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at F-distichus_contig106212:38..1719- (Fucus distichus monoicous)back to top |