mRNA_F-distichus_contig10621.527.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10621.527.1
Unique NamemRNA_F-distichus_contig10621.527.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: D7FIP5_ECTSI (Uncharacterized protein ycf23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP5_ECTSI)

HSP 1 Score: 446 bits (1148), Expect = 2.700e-151
Identity = 241/273 (88.28%), Postives = 256/273 (93.77%), Query Frame = 1
Query:   19 MKSTYFIFATAALSGAESFCFAPTRMSGDVLAPFHAGKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGLPAPKAVEAP 837
            M+ST  I A AALS A++FCF+P RMSGDVLAPF AGK+LKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDP+LVR AKAVSNVPVCVSAV+PELFPACV AGAEMVELGNFD FYDQGLTF+AEDVLEMTRKTRALLP+ PLSVTVPHTLDL++QV LA ELE LGVDVIQTEGK+SLDPS GG+QGAIERAAPTLAAAHAIS+AV+IPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGLP P AVEAP
Sbjct:    1 MRSTCVIAAAAALSCADAFCFSPARMSGDVLAPFQAGKALKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELFPACVDAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRALLPTTPLSVTVPHTLDLDDQVDLAVELEGLGVDVIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISKAVSIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGLPKPSAVEAP 273          
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: A0A835YK10_9STRA (Uncharacterized protein ycf23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK10_9STRA)

HSP 1 Score: 321 bits (823), Expect = 2.040e-102
Identity = 173/258 (67.05%), Postives = 210/258 (81.40%), Query Frame = 1
Query:   49 AALSGAESFCFAPTRMSGDVLAPFHAGKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVS-NVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGLPAP 819
            A+L G E F      MSGD +APF A K+LK+ISG+  FD++LV KVA AA AGG TH+DIA DPELV++AK  + +V +CVSA+EPEL   CV AGA+MVELGNFD FYDQG+ FTA+DV+ MT+ TRALLP  PLSVT+PH L +++QV LA+ L+ LGVDVIQTEGKYSLDPS GG+QG IERAAP LAA +AI+RAV+IPVM +SG+S+VTA MALAAGA GVGVGSAVNKLN+++ M+AVVRA+A AM LPAP
Sbjct:   12 ASLCGVEGFM----TMSGDAIAPFRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMIAVVRALAIAMDLPAP 265          
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: A0A1Y1HWD8_KLENI (Uncharacterized protein ycf23 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWD8_KLENI)

HSP 1 Score: 286 bits (731), Expect = 3.600e-88
Identity = 156/243 (64.20%), Postives = 193/243 (79.42%), Query Frame = 1
Query:   82 APTRMSGDVLAPFHAGKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGL 810
            AP+R   DVL PF   K+ KVI+GL  F+ + V+++  AA  GG TH+DIACDPELV++A ++++VPVCVSAVEPELF   VAAGA MVE+GN+D FY +G TF AE+VL +TR+TR LLP++PLSVTVPHTL L +QV LAE LE  G D+IQTEG  S  P+  GV G IE+A+PTLAAA++ISRAV+IPVM ASG+SDVTA MA+AAGA GVGVGSA+NKLNS I M+A  RAIA+A+GL
Sbjct:   62 APSRQ--DVLRPFAEKKAFKVIAGLKNFNRENVAEIVAAAEQGGATHVDIACDPELVKLACSLTSVPVCVSAVEPELFVPAVAAGATMVEIGNYDPFYAEGRTFDAEEVLALTRRTRQLLPTIPLSVTVPHTLPLPDQVHLAELLENAGADIIQTEGGVSSAPTQAGVAGMIEKASPTLAAAYSISRAVSIPVMCASGISDVTASMAIAAGAAGVGVGSAINKLNSGIAMIAATRAIANALGL 302          
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: U5DGR7_9CHRO (Pyruvate/oxaloacetate carboxyltransferase n=1 Tax=Rubidibacter lacunae KORDI 51-2 TaxID=582515 RepID=U5DGR7_9CHRO)

HSP 1 Score: 274 bits (700), Expect = 1.660e-84
Identity = 148/231 (64.07%), Postives = 182/231 (78.79%), Query Frame = 1
Query:  112 APFHAGKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAM 804
            A F    +LK+ISGLN F+ D V+ VARAAAAGG T +DIA  PELVR A+   ++P+C SAVEPE F A VAAGA+++E+GNFD FY QG  F AE+VL +TR TRALLP V LSVTVPH L L+ QV+LAE+L   G DVIQTEG  S  P+ GGV GAIE+AAPTLAAAH ISRAV++PV+ ASGL+DVTAP+A+AAGA G+GVGSAVN+LNS++ MVA VR++ +A+
Sbjct:    8 AAFARRNALKIISGLNNFNGDRVAAVARAAAAGGATFVDIAASPELVRRARQACDLPICTSAVEPEAFVAAVAAGADLIEIGNFDCFYAQGRRFEAEEVLALTRATRALLPQVMLSVTVPHVLPLDAQVQLAEDLVRAGADVIQTEGGTSSQPAHGGVLGAIEKAAPTLAAAHCISRAVDVPVLCASGLTDVTAPLAIAAGAAGIGVGSAVNRLNSKVAMVAAVRSLVAAL 238          
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: UPI001882BC92 (DUF561 domain-containing protein n=1 Tax=Cyanobacterium stanieri TaxID=102235 RepID=UPI001882BC92)

HSP 1 Score: 273 bits (698), Expect = 3.190e-84
Identity = 148/233 (63.52%), Postives = 183/233 (78.54%), Query Frame = 1
Query:  130 KSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGLPAPKAV 828
            K+LKVISGLN FD   V  V RAA  GG T +DIA D E+++  K   ++PVCVSAVEP+LF + V AGA+++E+GNFDSFY QG+ F+AEDVL +TR+TRALLP V LSVTVPHTL L+EQV LA++LEA G D+IQTEG  S +P+  G+ G IE+A+PTLAAAHAISRAV IPV+ ASGLSDVT PMA+A GA GVGVGSAVNKLN ++ M+AVVR++  A+   A +AV
Sbjct:   14 KALKVISGLNNFDVANVVAVCRAAQLGGATFVDIAADVEIIKAVKESIDLPVCVSAVEPQLFVSAVEAGADLIEIGNFDSFYAQGINFSAEDVLSLTRQTRALLPHVLLSVTVPHTLPLDEQVELAQKLEAEGADIIQTEGGTSSNPNHSGILGLIEKASPTLAAAHAISRAVQIPVLCASGLSDVTVPMAIATGASGVGVGSAVNKLNDQVAMIAVVRSLVEALNRSASQAV 246          
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: A0A166CRX2_DAUCS (Uncharacterized protein ycf23 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166CRX2_DAUCS)

HSP 1 Score: 275 bits (702), Expect = 6.200e-84
Identity = 144/234 (61.54%), Postives = 190/234 (81.20%), Query Frame = 1
Query:  106 VLAPFHAGKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEG-KYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAM 804
            VL  FHA K++K+ISGL  FD D V+ V  AA  GG TH+DIACDP+LV++A +++++P+CVS+V+P  FPA + AGA MVE+GN+DSFY++G+TF+ E++L +TR+T+ +LPSV LSVTVPHTL L +Q++LAE+LE  GVDVIQTEG KYS  P+  G+ G IE+A PTLAAA++ISRAV IPVM +SGLS VTAPMA+ AGA GVGVGSA+NKLN  I M+A VR+IA+++
Sbjct:   60 VLKDFHAKKAIKIISGLQNFDKDNVASVVTAADKGGATHVDIACDPDLVKLATSLTSLPICVSSVDPAAFPAAIEAGAVMVEIGNYDSFYEKGVTFSPEEILNLTRETKKILPSVALSVTVPHTLSLPDQIKLAEQLEQEGVDVIQTEGGKYS-SPTKSGILGLIEKATPTLAAAYSISRAVKIPVMCSSGLSAVTAPMAITAGAAGVGVGSAINKLNDVIAMIAEVRSIANSL 292          
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: A0A1E5QXG4_9CHRO (Uncharacterized protein n=2 Tax=unclassified Cyanobacterium TaxID=2629879 RepID=A0A1E5QXG4_9CHRO)

HSP 1 Score: 272 bits (695), Expect = 8.890e-84
Identity = 144/225 (64.00%), Postives = 178/225 (79.11%), Query Frame = 1
Query:  130 KSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAM 804
            K+LKVISGLN FD   V  V +AA  GG T +DIA D E+++  K   N+PVCVSAVEP+LF + V AGA+++E+GNFDSFY QG+ F+AEDVL +TR+TRALLP++ LSVTVPHTL L+EQV LA+ LEA G D+IQTEG  S  P+  G+ G IE+A+PTLAAAHAIS+AV IPV+ ASGLSDVT PMA+A GA GVGVGSAVNKLN E+ M+AVVR++  A+
Sbjct:   14 KALKVISGLNNFDLANVKAVCKAAELGGATFVDIAADVEIIKAVKESINIPVCVSAVEPQLFVSAVEAGADLIEIGNFDSFYAQGINFSAEDVLNLTRQTRALLPNILLSVTVPHTLPLHEQVELAQALEAAGADIIQTEGGTSSKPNHSGILGLIEKASPTLAAAHAISKAVQIPVLCASGLSDVTVPMAIATGASGVGVGSAVNKLNDEVAMMAVVRSLVEAL 238          
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: L1K0A3_GUITC (Uncharacterized protein ycf23 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K0A3_GUITC)

HSP 1 Score: 272 bits (695), Expect = 9.190e-84
Identity = 150/236 (63.56%), Postives = 184/236 (77.97%), Query Frame = 1
Query:  100 GDVLAPFHAGKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALL-PSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAM 804
            GDV+ PF   ++LK+ISGLN FD   V+ V RAA AGG T +DIACDP+LV++A+++ NVPVCVS+V  E F A V AGA MVE+GN+DSFY QG  F+AE+VL +T +TR +L  S+P+SVTVPHTL L+EQV LA  LEA G  +IQTEG   + PS+GG+QG IE+AAPTLAA  AIS+AV IP MAASG+S +TAP+A+AAGA GVGVGSAVNKLNSEI M+A VR I  AM
Sbjct:    4 GDVMLPFEQRRALKIISGLNNFDEKSVASVVRAANAGGATLVDIACDPKLVQLARSIGNVPVCVSSVVAEDFLAAVKAGANMVEIGNYDSFYAQGRKFSAEEVLAITERTRDILGSSIPVSVTVPHTLPLDEQVSLALALEAAGASIIQTEGGMPMKPSSGGIQGLIEKAAPTLAATAAISKAVEIPTMAASGISAITAPLAIAAGASGVGVGSAVNKLNSEIAMLAAVREIYEAM 239          
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: M1AF41_SOLTU (Uncharacterized protein ycf23 n=16 Tax=Solanaceae TaxID=4070 RepID=M1AF41_SOLTU)

HSP 1 Score: 274 bits (700), Expect = 1.080e-83
Identity = 144/235 (61.28%), Postives = 186/235 (79.15%), Query Frame = 1
Query:  106 VLAPFHAGKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGL 810
            VL  FH  K+LK+I+GL   D + V+ V  AA  GG TH+DIACDPELV++A +++++PVCVS+V+P  FPA V AGA MVE+GN+DSFY++GL F+ E +L +T++T+ LLPSV LSVTVPHTL L +QV+LAE+LE  GVD+IQTEG     PS  GV G IE+A PTLAAA++ISRAVNIPVM +SGLS VTAPMA+ AGA GVGVGSA+NKLN ++ M+A V++IA ++GL
Sbjct:   56 VLKEFHEKKALKIIAGLQNLDKENVASVVTAADKGGATHVDIACDPELVKLAISLTSLPVCVSSVDPAAFPAAVEAGALMVEIGNYDSFYEKGLVFSPEQILNLTKETKRLLPSVVLSVTVPHTLSLPDQVKLAEQLELEGVDIIQTEGGKCSTPSKAGVLGLIEKATPTLAAAYSISRAVNIPVMCSSGLSAVTAPMAIVAGAAGVGVGSAINKLNDQVAMIAEVKSIAHSLGL 290          
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: UPI001F492C80 (DUF561 domain-containing protein n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F492C80)

HSP 1 Score: 271 bits (694), Expect = 1.340e-83
Identity = 143/226 (63.27%), Postives = 183/226 (80.97%), Query Frame = 1
Query:  127 GKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAM 804
            G++LKVISGLN FD D VS V +AAA GG T +DIA DP+LVR+ K + ++PVCVSAVEPELF  CVAAGA+++E+GNFDSFY QG  F A +VL +T++TR LLP++ LSVTVPH L+L++QV+LAEEL   G D+IQTEG  S  P+  G  G IE+A PTLAAA+ ISRAV+IPV+ ASGLS+VTAP+A+AAGA G+GVGSA+NKL+SE+ M+AVVR++  A+
Sbjct:   14 GRALKVISGLNNFDRDRVSAVVKAAAQGGATFVDIAADPDLVRLVKQLIHLPVCVSAVEPELFVTCVAAGADLIEIGNFDSFYAQGRRFEAPEVLALTQETRRLLPAITLSVTVPHILELDQQVQLAEELVKAGADIIQTEGGTSSTPTHAGTLGLIEKATPTLAAAYEISRAVHIPVLCASGLSNVTAPLAIAAGASGIGVGSAINKLSSEVEMIAVVRSLVEAL 239          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIP5_ECTSI2.700e-15188.28Uncharacterized protein ycf23 n=2 Tax=Ectocarpus T... [more]
A0A835YK10_9STRA2.040e-10267.05Uncharacterized protein ycf23 n=1 Tax=Tribonema mi... [more]
A0A1Y1HWD8_KLENI3.600e-8864.20Uncharacterized protein ycf23 n=1 Tax=Klebsormidiu... [more]
U5DGR7_9CHRO1.660e-8464.07Pyruvate/oxaloacetate carboxyltransferase n=1 Tax=... [more]
UPI001882BC923.190e-8463.52DUF561 domain-containing protein n=1 Tax=Cyanobact... [more]
A0A166CRX2_DAUCS6.200e-8461.54Uncharacterized protein ycf23 n=1 Tax=Daucus carot... [more]
A0A1E5QXG4_9CHRO8.890e-8464.00Uncharacterized protein n=2 Tax=unclassified Cyano... [more]
L1K0A3_GUITC9.190e-8463.56Uncharacterized protein ycf23 n=2 Tax=Guillardia t... [more]
M1AF41_SOLTU1.080e-8361.28Uncharacterized protein ycf23 n=16 Tax=Solanaceae ... [more]
UPI001F492C801.340e-8363.27DUF561 domain-containing protein n=1 Tax=Leptodesm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10621contigF-distichus_contig10621:831..4309 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score448.4
Seed ortholog evalue2.6e-123
Seed eggNOG ortholog2880.D7FIP5
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Protein of unknown function (DUF561)
EggNOG OGs28MV1@1,2QUDA@2759
Ec32 ortholog descriptionAldolase-type TIM barrel
Ec32 orthologEc-27_000540.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1882
Cds size849
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10621.527.1prot_F-distichus_contig10621.527.1Fucus distichus monoicouspolypeptideF-distichus_contig10621 849..3294 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928989.351038-UTR-F-distichus_contig10621:830..8481622928989.351038-UTR-F-distichus_contig10621:830..848Fucus distichus monoicousUTRF-distichus_contig10621 831..848 +
1690885094.0188608-UTR-F-distichus_contig10621:830..8481690885094.0188608-UTR-F-distichus_contig10621:830..848Fucus distichus monoicousUTRF-distichus_contig10621 831..848 +
1622928989.4623215-UTR-F-distichus_contig10621:3294..43091622928989.4623215-UTR-F-distichus_contig10621:3294..4309Fucus distichus monoicousUTRF-distichus_contig10621 3295..4309 +
1690885094.0878844-UTR-F-distichus_contig10621:3294..43091690885094.0878844-UTR-F-distichus_contig10621:3294..4309Fucus distichus monoicousUTRF-distichus_contig10621 3295..4309 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928989.367647-CDS-F-distichus_contig10621:848..9711622928989.367647-CDS-F-distichus_contig10621:848..971Fucus distichus monoicousCDSF-distichus_contig10621 849..971 +
1690885094.0297544-CDS-F-distichus_contig10621:848..9711690885094.0297544-CDS-F-distichus_contig10621:848..971Fucus distichus monoicousCDSF-distichus_contig10621 849..971 +
1622928989.385314-CDS-F-distichus_contig10621:1365..15061622928989.385314-CDS-F-distichus_contig10621:1365..1506Fucus distichus monoicousCDSF-distichus_contig10621 1366..1506 +
1690885094.039476-CDS-F-distichus_contig10621:1365..15061690885094.039476-CDS-F-distichus_contig10621:1365..1506Fucus distichus monoicousCDSF-distichus_contig10621 1366..1506 +
1622928989.4009209-CDS-F-distichus_contig10621:1878..20911622928989.4009209-CDS-F-distichus_contig10621:1878..2091Fucus distichus monoicousCDSF-distichus_contig10621 1879..2091 +
1690885094.0498383-CDS-F-distichus_contig10621:1878..20911690885094.0498383-CDS-F-distichus_contig10621:1878..2091Fucus distichus monoicousCDSF-distichus_contig10621 1879..2091 +
1622928989.4165473-CDS-F-distichus_contig10621:2576..26561622928989.4165473-CDS-F-distichus_contig10621:2576..2656Fucus distichus monoicousCDSF-distichus_contig10621 2577..2656 +
1690885094.0613184-CDS-F-distichus_contig10621:2576..26561690885094.0613184-CDS-F-distichus_contig10621:2576..2656Fucus distichus monoicousCDSF-distichus_contig10621 2577..2656 +
1622928989.428741-CDS-F-distichus_contig10621:2784..29511622928989.428741-CDS-F-distichus_contig10621:2784..2951Fucus distichus monoicousCDSF-distichus_contig10621 2785..2951 +
1690885094.0705237-CDS-F-distichus_contig10621:2784..29511690885094.0705237-CDS-F-distichus_contig10621:2784..2951Fucus distichus monoicousCDSF-distichus_contig10621 2785..2951 +
1622928989.4414551-CDS-F-distichus_contig10621:3169..32941622928989.4414551-CDS-F-distichus_contig10621:3169..3294Fucus distichus monoicousCDSF-distichus_contig10621 3170..3294 +
1690885094.0803604-CDS-F-distichus_contig10621:3169..32941690885094.0803604-CDS-F-distichus_contig10621:3169..3294Fucus distichus monoicousCDSF-distichus_contig10621 3170..3294 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10621.527.1

>prot_F-distichus_contig10621.527.1 ID=prot_F-distichus_contig10621.527.1|Name=mRNA_F-distichus_contig10621.527.1|organism=Fucus distichus monoicous|type=polypeptide|length=283bp
MKSTYFIFATAALSGAESFCFAPTRMSGDVLAPFHAGKSLKVISGLNKFD
ADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFP
ACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTV
PHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTL
AAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIG
MVAVVRAIASAMGLPAPKAVEAPTPSVETAAV*
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mRNA from alignment at F-distichus_contig10621:831..4309+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10621.527.1 ID=mRNA_F-distichus_contig10621.527.1|Name=mRNA_F-distichus_contig10621.527.1|organism=Fucus distichus monoicous|type=mRNA|length=3479bp|location=Sequence derived from alignment at F-distichus_contig10621:831..4309+ (Fucus distichus monoicous)
TGCGCAGCGGTACAAGCCATGAAGTCTACATACTTTATTTTCGCTACGGC GGCGCTGTCAGGAGCGGAATCGTTTTGCTTTGCCCCGACTCGCATGTCCG GCGACGTTCTGGCACCTTTCCACGCGGGAAAATCTCTAAAGGTGAGGGAA TTCGTCGCCTCAGCGTTGATGTACGCTGCACAGCATGACGATGGACCTCA TCCTGTGTTCTACAACGCCAGTTTAACATAGCTGTGGTCACTTTTCGGGC GCACCTGTTTGTGCTTTCTGTTTTGTTCTTATGTTTCTGTGCTCCTGAAG CAAGAGGCAAATTGATGAAAGTGATTCTTCGCGCCTCTCCTCGAACATAA CGCCGCGCGGCAGCAAGAAACGTCAAACGCGGGGTTAGTGACGAGGCAAT CAGTTCTGAAATAGATGTGGGGCTAGAATCGACCAATCGGCTTTGATACC ACTTGGCAGGTTTATAGGCATGAAGTTCGCTCATCGACCTGCGCTGGGCT GTAGCGCTAATCCCTGAGCACGGCCACTGAAGCAGGTTATCTCAGGGCTC AACAAATTCGACGCCGATCTGGTGTCGAAGGTGGCTCGAGCAGCGGCCGC GGGCGGTGGCACCCACATCGATATCGCGTGTGATCCCGAGCTCGTCCGTG TCGCGAAGGCGGTATCCAACGTACCGGTGAGGACCTCAGTACTTCGACAC GAGGATCATCTCTCTCGATACTTTTAATACTGTAGATAAGGTACCGGTAG TTACTCATCGGTCGGTACAGTAACCCAAGAGCAAACTTCCGATTCGATGC TCTCAGTTGTAGCCAGGCAGCTTGCGAGCGGTTGCTTTTGCCCGAGCAGC AGCAATAGAATGAGGAGGAATAATTCATCGGTGATTTCTGGCCGGCCGAG GTACCAGATGCAGAACATCACACTCGCGAAACAGATATATTCTCCCCCAT CCGGAAAAGGGCCGCAAACGTCGGTTAGGACATCGACTTATATCGTTCTT CTGTCTGCTACCCATTGCCATTCCCCCACGAAACGGCGGGTGAACAAGGT GTGCGTCTCGGCGGTCGAGCCTGAGCTGTTCCCCGCTTGCGTTGCCGCCG GCGCGGAGATGGTGGAGCTCGGAAACTTTGATAGCTTCTACGACCAGGGG CTAACCTTCACGGCAGAGGATGTGCTGGAGATGACCCGCAAGACGAGGGC TCTTCTCCCGTCCGTGCCGCTGTCCGTTACCGTGCCGCACACCCTCGATC TGAACGAGCAGGTGAGGGCGGGTCGTGAGAAAACTGTGGGACCCCCTGTG GAGAGACCCCGCGGGGGAAAATACGTACTTAGGAAGAGATATTTACTTTC CCTTGTTGATCTGAAGAAATCGTGCGGCAGGCGTTACAGTTTCATTTATC CGTTATGGATCTCGATAGGCTATTTCATTCCCCGCAGTTGTGCCTCGTAT CCTAAGTCCAATGTGCTTTCCATAAGCTCTTATCTTCTGCCCTTAGAGTC GACCTGCGATCACAAGAGCTCGCCTTGGTCTCCCCACGATGCCTTCAATT CAAATGATTTTGCGTTTATGGTGCTGAAGCTCTGTTGAGTGCGCAGAGAG GTAGTCGCGGGTGCGCTCAAAGTTGGCATGGAACTCCAATGCCCTATGAA GGATACCCGTGTCTTCTATACAAGTATCCTAATGCGATTATAGAAACGGA GAACTTTCGAGGGAGACGATTTTAACCTCCCATTATATTCCGTTAGGTGC GCCTCGCAGAGGAGCTCGAGGCTCTCGGCGTGGACGTCATCCAGACGGAG GGGAAGTACAGCCTCGACCCTTCCACGTAAGATACAATGAATTCCACTGA ATGCTGTGCTAAAGTCGTACGGAGTCTCCTTCTAATCATGGCTATTGCAA CAGTTATATAAATAGTTATTATCTCTGTTTCACGAAATTTAATCATGCGG CCAGGGGCGGCGTCCAGGGAGCGATCGAGCGCGCGGCGCCGACGCTTGCC GCAGCGCATGCGATCTCTCGAGCCGTGAACATTCCTGTCATGGCTGCCTC CGGTCTCAGCGACGTCACGGCGCCAATGGCGTTGGCTGCTGGGGCCCGGG GTGTTGGAGTGGGATCGGCAGGTGAGGCGCTATACTGTGTGTTCATGGGC CTACGAAAAACATGCAGTATGCGACCAGAAATATATACTAGTACCTATTA ATAATACATTTTTTGCGGCATTCTTTGTGCTTGCGCGAGCTATGTCAGCG AGACAACACTGTTCCGCTTCATCGAGCGCTCGAGCAGATCCATTGACCTA ATTCCTTTGCGTGGTCTCCCATTTTTTTTGGCCTTCCAGTCAACAAACTC AACAGCGAGATCGGGATGGTGGCAGTGGTTCGAGCAATCGCGTCGGCGAT GGGGCTGCCCGCGCCAAAAGCAGTGGAGGCGCCCACTCCTTCTGTTGAAA CTGCAGCAGTTTAGTTCCCCGCATGTACGCGAGGGGTAGCTTGACGCGCG GTAGTTACTCGAGGCGTGCCGATACCGATCGAGAGTTCCGTGTGGATCAC CTTTGAAAGGGTGATGGTAGGGAGCACGCTCCAGTTCCAATCTTGTTTCG TCGGCTTGGGTCGTGTCGGCGCCCGTTTTAGACACGATCTTTATTAATGG TTTCCATTTTGTTGCGTCTGGGAGCAGAACCGACATTGCTAAATCTTTTG TTGCGGGAAGAAGGCGAAATTATTGCCTGCCAGAACTTCTTTGCGGTTTT GCGCCTCTAAACTACTTGCGTGGCGGATATGATCAAGCGCCGCTCAAATG CTGACGTTTCAGCCAAACGATCAACGATCAATAGTTGAGACGTAGCCGTA CCCGCCTCCGATACTGTCTGGATCACACATGTCCACTGTAGGGAAATAAA GGGCACACACATGAGGTGTAGCAGTACCGTCTCCGATGCTGTTGATGAGT ATCCGGACACCTCATGTCTGCCGCAAGTACTCCAACGTAGAAACCAAGTC GCCGACGAGCATGAGCCTTGCGACGAGAATATTTCAATTCTGAACACGTT GAGAGCAAAGGCCGCCGATGCGCGAACATGCTTTCTACCAGGTAGGGTAC TACGGTATCCAATTAGCTACGTAGATCCAGGCAGTAATGCGGTTGAGGAC CACCCTACACAATATACTGTCCGGCGGCGTAGCCGCGAAATAAGCTTTAG CGGCATTTCATCTAACACGTGCATCGTGCTTGGTGACAAAACGGGTTGGA TGGTGGACTGAAAAGAGAACCCAAGTCCCTTCGTGCCGCCGCACTACAGC AGTAGTTAAGCCAGGAATGCTCTCAAGGTGCTGCTGGTTGACGCCAGTGA CTCGATTCCTCAATGACCACGCTTGAGCTCAGAACTTTCTCGGCGCTGCT TCGTGTACGCTCTTTCCTGCGCACAGATCAGCTTGTGCGAGCTCAGTTTT TTACCGATTTTGCTGTTTTACGTTTGAAC
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Coding sequence (CDS) from alignment at F-distichus_contig10621:831..4309+

>mRNA_F-distichus_contig10621.527.1 ID=mRNA_F-distichus_contig10621.527.1|Name=mRNA_F-distichus_contig10621.527.1|organism=Fucus distichus monoicous|type=CDS|length=1698bp|location=Sequence derived from alignment at F-distichus_contig10621:831..4309+ (Fucus distichus monoicous)
ATGAAGTCTACATACTTTATTTTCGCTACGGCGGCGCTGTCAGGAGCGGA
ATCGTTTTGCTTTGCCCCGACTCGCATGTCCGGCGACGTTCTGGCACCTT
TCCACGCGGGAAAATCTCTAAAGATGAAGTCTACATACTTTATTTTCGCT
ACGGCGGCGCTGTCAGGAGCGGAATCGTTTTGCTTTGCCCCGACTCGCAT
GTCCGGCGACGTTCTGGCACCTTTCCACGCGGGAAAATCTCTAAAGGTTA
TCTCAGGGCTCAACAAATTCGACGCCGATCTGGTGTCGAAGGTGGCTCGA
GCAGCGGCCGCGGGCGGTGGCACCCACATCGATATCGCGTGTGATCCCGA
GCTCGTCCGTGTCGCGAAGGCGGTATCCAACGTACCGGTTATCTCAGGGC
TCAACAAATTCGACGCCGATCTGGTGTCGAAGGTGGCTCGAGCAGCGGCC
GCGGGCGGTGGCACCCACATCGATATCGCGTGTGATCCCGAGCTCGTCCG
TGTCGCGAAGGCGGTATCCAACGTACCGGTGTGCGTCTCGGCGGTCGAGC
CTGAGCTGTTCCCCGCTTGCGTTGCCGCCGGCGCGGAGATGGTGGAGCTC
GGAAACTTTGATAGCTTCTACGACCAGGGGCTAACCTTCACGGCAGAGGA
TGTGCTGGAGATGACCCGCAAGACGAGGGCTCTTCTCCCGTCCGTGCCGC
TGTCCGTTACCGTGCCGCACACCCTCGATCTGAACGAGCAGGTGTGCGTC
TCGGCGGTCGAGCCTGAGCTGTTCCCCGCTTGCGTTGCCGCCGGCGCGGA
GATGGTGGAGCTCGGAAACTTTGATAGCTTCTACGACCAGGGGCTAACCT
TCACGGCAGAGGATGTGCTGGAGATGACCCGCAAGACGAGGGCTCTTCTC
CCGTCCGTGCCGCTGTCCGTTACCGTGCCGCACACCCTCGATCTGAACGA
GCAGGTGCGCCTCGCAGAGGAGCTCGAGGCTCTCGGCGTGGACGTCATCC
AGACGGAGGGGAAGTACAGCCTCGACCCTTCCACGTGCGCCTCGCAGAGG
AGCTCGAGGCTCTCGGCGTGGACGTCATCCAGACGGAGGGGAAGTACAGC
CTCGACCCTTCCACGGGCGGCGTCCAGGGAGCGATCGAGCGCGCGGCGCC
GACGCTTGCCGCAGCGCATGCGATCTCTCGAGCCGTGAACATTCCTGTCA
TGGCTGCCTCCGGTCTCAGCGACGTCACGGCGCCAATGGCGTTGGCTGCT
GGGGCCCGGGGTGTTGGAGTGGGATCGGCAGGGGCGGCGTCCAGGGAGCG
ATCGAGCGCGCGGCGCCGACGCTTGCCGCAGCGCATGCGATCTCTCGAGC
CGTGAACATTCCTGTCATGGCTGCCTCCGGTCTCAGCGACGTCACGGCGC
CAATGGCGTTGGCTGCTGGGGCCCGGGGTGTTGGAGTGGGATCGGCAGTC
AACAAACTCAACAGCGAGATCGGGATGGTGGCAGTGGTTCGAGCAATCGC
GTCGGCGATGGGGCTGCCCGCGCCAAAAGCAGTGGAGGCGCCCACTCCTT
CTGTTGAAACTGCAGCAGTTTAGTCAACAAACTCAACAGCGAGATCGGGA
TGGTGGCAGTGGTTCGAGCAATCGCGTCGGCGATGGGGCTGCCCGCGCCA
AAAGCAGTGGAGGCGCCCACTCCTTCTGTTGAAACTGCAGCAGTTTAG
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